Skip to main content
Log in

Comparative evaluation of amphotericin B binding to the native and modified forms of rice lipid-transfer protein: a possible perspective on improving the drug-binding affinity and specificity

  • Original Paper
  • Published:
Journal of the Iranian Chemical Society Aims and scope Submit manuscript

Abstract

Plant non-specific lipid-transfer proteins (nsLTPs) are small basic proteins which transport phospholipids between different cell membranes. They are classified, based on their molecular weight, into two subfamilies: nsLTP1 (9 kDa) and nsLTP2 (7 kDa). These proteins have received an increasing research interest as efficient drug carriers in drug delivery systems. However, there have been few studies conducted on their drug-binding characteristics. The present study aims to comparatively evaluate binding of amphotericin B (AmB, an antifungal drug) to the native and modified forms of rice nsLTP1 and to assess possible applications in drug delivery methods. The LTP1 was purified and then interaction of AmB with the native and modified forms of protein was investigated with various spectroscopic methods. The results showed that the AmB–LTP binding is associated with quenching of the protein intrinsic fluorescence. Furthermore, as temperature of the medium increased, the stability of the AmB–native LTP complex decreased, whereas the stability of the AmB–modified LTP increased. Analysis of the thermodynamic parameters of the AmB–protein complexes and extrinsic fluorescence data indicated that the lysine modification caused a change in the intermolecular interactions between the protein and AmB as well as in the protein surface hydrophobicity (PSH). Furthermore, Dixon plot showed that AmB inhibits ANS binding especially in the AmB–modified RLTP binding. Findings of the current study highlighted the drug-binding characteristics of the modified form of LTP necessitating further studies to profoundly evaluate the characteristics of its mutant forms.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Scheme 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9

Similar content being viewed by others

References

  1. F.A. de Wolf, G.M. Brett, Pharmacol. Rev. 52, 207 (2000)

    Google Scholar 

  2. F.A. Dorkoosh, J.C. Verhoef, G. Borchard, M. Rafiee-Tehrani, H.E. Junginger, J Control Release 71, 307 (2001)

    Article  CAS  Google Scholar 

  3. B.G. Davis, M.A. Robinson, Curr. Opin. Drug Discov. Devel. 5, 279 (2002)

    CAS  Google Scholar 

  4. A. Bhattacharya, A. Mukherjee, Indian J. Pharm. Sci. 61, 389 (1999)

    Google Scholar 

  5. C. Pato, M. Le Borgne, G. Le Baut, P. Le Pape, D. Marion, J.P. Douliez, Biochem. Pharmacol. 62, 555 (2001)

    Article  CAS  Google Scholar 

  6. J.C. Kader, Annu Rev Plant Physiol Plant Mol Biol 47, 627 (1996)

    Article  CAS  Google Scholar 

  7. Y.J. Liu, D. Samuel, C.H. Lin, P.C. Lyu, Biochem. Biophys. Res. Commun. 294, 535 (2002)

    Article  CAS  Google Scholar 

  8. F. Tchang, P. This, V. Stiefel, V. Arondel, M.D. Morch, M. Pages, P. Puigdomenech, F. Grellet, M. Delseny, P. Bouillon et al., J. Biol. Chem. 263, 16849 (1988)

    CAS  Google Scholar 

  9. W.H. Trzeciak, E.R. Simpson, T.J. Scallen, G.V. Vahouny, M.R. Waterman, J. Biol. Chem. 262, 3713 (1987)

    CAS  Google Scholar 

  10. W.R. Bernhard, S. Thoma, J. Botella, C.R. Somerville, Plant Physiol. 95, 164 (1991)

    Article  CAS  Google Scholar 

  11. K. Takishima, S. Watanabe, M. Yamada, G. Mamiya, Biochim. Biophys. Acta 870, 248 (1986)

    Article  CAS  Google Scholar 

  12. D.H. Shin, J.Y. Lee, K.Y. Hwang, K.K. Kim, S.W. Suh, Structure 3, 189 (1995)

    Article  CAS  Google Scholar 

  13. J.Y. Lee, K. Min, H. Cha, D.H. Shin, K.Y. Hwang, S.W. Suh, J. Mol. Biol. 276, 437 (1998)

    Article  CAS  Google Scholar 

  14. G.W. Han, J.Y. Lee, H.K. Song, C. Chang, K. Min, J. Moon, D.H. Shin, M.L. Kopka, M.R. Sawaya, H.S. Yuan, T.D. Kim, J. Choe, D. Lim, H.J. Moon, S.W. Suh, J. Mol. Biol. 308, 263 (2001)

    Article  CAS  Google Scholar 

  15. A. Desormeaux, J.E. Blochet, M. Pezolet, D. Marion, Biochim. Biophys. Acta 1121, 137 (1992)

    Article  CAS  Google Scholar 

  16. J.P. Simorre, A. Caille, D. Marion, M. Ptak, Biochemistry 30, 11600 (1991)

    Article  CAS  Google Scholar 

  17. M.H. Lerche, B.B. Kragelund, L.M. Bech, F.M. Poulsen, Structure 5, 291 (1997)

    Article  CAS  Google Scholar 

  18. D. Charvolin, J.P. Douliez, D. Marion, C. Cohen-Addad, E. Pebay-Peyroula, Eur. J. Biochem. 264, 562 (1999)

    Article  CAS  Google Scholar 

  19. P. Sodano, A. Caille, D. Sy, G. de Person, D. Marion, M. Ptak, FEBS Lett. 416, 130 (1997)

    Article  CAS  Google Scholar 

  20. K. Lindorff-Larsen, J.R. Winther, FEBS Lett. 488, 145 (2001)

    Article  CAS  Google Scholar 

  21. C.S. Cheng, M.N. Chen, Y.J. Liu, L.Y. Huang, K.F. Lin, P.C. Lyu, Enzyme Microb. Technol. 35, 532 (2004)

    Article  CAS  Google Scholar 

  22. D.J. Drutz, A. Spickard, D.E. Rogers, M.G. Koenig, Am. J. Med. 45, 405 (1968)

    Article  CAS  Google Scholar 

  23. J.F. Gallelli, Drug Intel. 1, 102 (1967)

    CAS  Google Scholar 

  24. J.P. Utz, Ann. Intern. Med. 61, 340 (1964)

    Article  CAS  Google Scholar 

  25. N.C. Fisher, S. Singhal, S.J. Miller, J.G. Hastings, D.J. Mutimer, J. Antimicrob. Chemother. 43, 597 (1999)

    Article  CAS  Google Scholar 

  26. T.J. Walsh, Semin. Respir. Infect. 5, 111 (1990)

    CAS  Google Scholar 

  27. A.C. Leenders, P. Reiss, P. Portegies, K. Clezy, W.C. Hop, J. Hoy, J.C. Borleffs, T. Allworth, R.H. Kauffmann, P. Jones, F.P. Kroon, H.A. Verbrugh, S. de Marie, AIDS 11, 1463 (1997)

    Article  CAS  Google Scholar 

  28. S. Ghobadi, F. Yousefi, F. Khademi, S. Padidar, A. Mostafaie, J. Sep. Sci. (2012). doi:10.1002/jssc.201200383

    Google Scholar 

  29. U.K. Laemmli, Nature 227, 680 (1970)

    Article  CAS  Google Scholar 

  30. O.H. Lowry, N.J. Rosebrough, A.L. Farr, R.J. Randall, J. Biol. Chem. 193, 265 (1951)

    CAS  Google Scholar 

  31. H.B. Dixon, R.N. Perham, Biochem J 109, 312 (1968)

    CAS  Google Scholar 

  32. A.F. Habeeb, Anal. Biochem. 14, 328 (1966)

    Article  CAS  Google Scholar 

  33. F.Q. Cheng, Y.P. Wang, Z.P. Li, C. Dong, Spectrochim Acta A Mol Biomol Spectrosc 65, 1144 (2006)

    Article  Google Scholar 

  34. U. Kragh-Hansen, Pharmacol. Rev. 33, 17 (1981)

    CAS  Google Scholar 

  35. J.R. Lakowicz, Principles of fluorescence spectroscopy (Kluwer Academic/Plenum, New York, 1999)

    Book  Google Scholar 

  36. H.N. Hou, Z.D. Qi, Y.W. Ouyang, F.L. Liao, Y. Zhang, Y. Liu, J. Pharm. Biomed. Anal. 47, 134 (2008)

    Article  CAS  Google Scholar 

  37. A. Coi, A.M. Bianucci, F. Bonomi, P. Rasmussen, G.M. Mura, M.L. Ganadu, Int. J. Biol. Macromol. 42, 229 (2008)

    Article  CAS  Google Scholar 

  38. M. Moller, A. Denicola, Biochem. Mol. Biol. Edu. 30, 309 (2002)

    Article  CAS  Google Scholar 

  39. N. Buhot, E. Gomes, M.L. Milat, M. Ponchet, D. Marion, J. Lequeu, S. Delrot, P. Coutos-Thevenot, J.P. Blein, Mol. Biol. Cell 15, 5047 (2004)

    Article  CAS  Google Scholar 

  40. S. Tayyab, M.U. Siddiqui, N. Ahmad, Biochem. Educ. 23, 162 (1995)

    Article  CAS  Google Scholar 

  41. N. Guex, M.C. Peitsch, Electrophoresis 18, 2714 (1997)

    Article  CAS  Google Scholar 

  42. L.J. Ball, C.M. Goult, J.A. Donarski, J. Micklefield, V. Ramesh, Org. Biomol. Chem. 2, 1872 (2004)

    Article  CAS  Google Scholar 

  43. J. Gasteiger, M. Marsili, Tetrahedron 36, 3219 (1980)

    Article  CAS  Google Scholar 

  44. S.J. Weiner, P.A. Kollman, D.A. Case, U.C. Singh, C. Ghio, G. Alagona, S. Profeta Jr, P. Weiner, J. Am. Chem. Soc. 106, 765 (1984)

    Article  CAS  Google Scholar 

  45. G.M. Morris, D.S. Goodsell, R.S. Halliday, R. Huey, W.E. Hart, R.K. Belew, A.J. Olson, J. Comput. Chem. 19, 1639 (1998)

    Article  CAS  Google Scholar 

  46. F.J. Solis, R.J.B. Wets, Mathematics Operations Res. 6, 19 (1981)

    Article  Google Scholar 

  47. W. Humphrey, A. Dalke, K. Schulten, J. Mol. Graph. 14, 33 (1996)

    Article  CAS  Google Scholar 

  48. D.S. Wishart, Pharmacogenomics 9, 1155 (2008)

    Article  CAS  Google Scholar 

  49. G.M. Morris, D.S. Goodsell, R. Huey, A.J. Olson, J. Comput. Aided Mol. Des. 10, 293 (1996)

    Article  CAS  Google Scholar 

  50. J.A. Erickson, M. Jalaie, D.H. Robertson, R.A. Lewis, M. Vieth, J. Med. Chem. 47, 45 (2004)

    Article  CAS  Google Scholar 

  51. K.L. Tkaczuk, J. Mol. Model. 16, 599 (2010)

    Article  CAS  Google Scholar 

  52. R. Khodarahmi, S.A. Karimi, M.R. Ashrafi Kooshk, S.A. Ghadami, S. Ghobadi, M. Amani, Spectrochim Acta A Mol Biomol Spectrosc 89, 177 (2012)

    Article  CAS  Google Scholar 

  53. P.D. Ross, S. Subramanian, Biochemistry 20, 3096 (1981)

    Article  CAS  Google Scholar 

  54. N. Shahabadi, S. Kashanian, F. Darabi, DNA Cell Biol. 28, 589 (2009)

    Article  CAS  Google Scholar 

  55. M. Cardamone, N.K. Puri, Biochem J 282(Pt 2), 589 (1992)

    CAS  Google Scholar 

  56. E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng, T.E. Ferrin, J. Comput. Chem. 25, 1605 (2004)

    Article  CAS  Google Scholar 

  57. M.F. Sanner, A.J. Olson, J.C. Spehner, Biopolymers 38, 305 (1996)

    Article  CAS  Google Scholar 

  58. R.F. Greene Jr, C.N. Pace, J. Biol. Chem. 249, 5388 (1974)

    CAS  Google Scholar 

  59. M.M. Santoro, D.W. Bolen, Biochemistry 27, 8063 (1988)

    Article  CAS  Google Scholar 

Download references

Acknowledgments

The authors thank the staff of Research Council of Kermanshah University of Medical Sciences for the financial support of this investigation. The sponsor, however, had no direct involvement with this work.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Mohammad Reza Ashrafi-Kooshk or Reza Khodarahmi.

Additional information

This work was performed in partial fulfillment of the requirements for MSc of S. Maghsoudi, in Medical Biology Research Center (and Faculty of Pharmaceutical Sciences), Kermanshah University of Medical Sciences, Kermanshah, Iran

Rights and permissions

Reprints and permissions

About this article

Cite this article

Maghsoudi, S., Ashrafi-Kooshk, M.R., Shahlaei, M. et al. Comparative evaluation of amphotericin B binding to the native and modified forms of rice lipid-transfer protein: a possible perspective on improving the drug-binding affinity and specificity. J IRAN CHEM SOC 10, 937–950 (2013). https://doi.org/10.1007/s13738-013-0231-7

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13738-013-0231-7

Keywords

Navigation