Skip to main content

Advertisement

Log in

Genotyping of human parechoviruses in Iranian young children with aseptic meningitis and sepsis-like illness

  • Published:
Journal of NeuroVirology Aims and scope Submit manuscript

Abstract

Human parechoviruses (HPeV) are classified into 14 genotypes. HPeV1 and HPeV2 are the most prevalent genotypes in young children, which have been associated with mild to severe diseases. This study was conducted to investigate the involvement of HPeVs in aseptic meningitis and sepsis-like illness in Iran. Viral RNA was extracted from 148 cerebrospinal fluid samples from children <8 years old with primary diagnosis of aseptic meningitis and/or sepsis-like illness. Specific HPeV, HEV real-time PCR and HPeV typing were done to identify the infection rate of these viruses. HPeV and HEV were detected in 64 (43.24 %), 31 (20.94 %) of 148 patients with 10 (6.75 %) coinfection. VP1/VP3 junction region was successfully sequenced from 12 of the HPeV-positive specimens, and all of them were identified as HPeV1. HPeV was more prevalent than HEV in both aseptic meningitis and sepsis-like illness, so further studies are needed to understand the disease burden of HPeV infections, and clinical manifestations especially in specific illnesses of possible viral etiology. Direct detection of these viruses leads to reduce hospitalization and use of antibiotic, which are often followed by other complications in neonates and young children.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig 1

Similar content being viewed by others

References

  • Abed Y, Boivin G (2006) Human parechovirus infections in Canada. Emerg Infect Dis 12:969–975

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Benschop KS, Schinkel J, Minnaar RP, Pajkrt D, Spanjerberg L, Kraakman H, Berkhout B, Zaaijer HL, Beld MGH, Wolters KC (2006) Human parechovirus infections in Dutch children and the association between serotype and disease severity. Clin Infect Dis 42:204–210

    Article  CAS  PubMed  Google Scholar 

  • Benschop K, Thomas X, Serpenti C, Molenkamp R, Wolthers K (2008a) High prevalence of human Parechovirus (HPeV) genotypes in the Amsterdam region and identification of specific HPeV variants by direct genotyping of stool samples. J Clin Microbiol 46:3965–3970

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Benschop K, Molenkamp R, van der Ham A, Wolthers K, Beld M (2008b) Rapid detection of human parechoviruses in clinical samples by real time PCR. J Clin Virol 41:69–74

    Article  CAS  PubMed  Google Scholar 

  • Boivin G, Abed Y, Boucher FD (2005) Human parechovirus 3 and neonatal infections. Emerg Infect Dis 11:103–105

    Article  PubMed Central  PubMed  Google Scholar 

  • de Vries M, Pyrc K, Berkhout R, Vermeulen-Oost W, Dijkman R, Jebbink MF, Bruisten S, Berkhout B, van der Hoek L (2008) Human parechovirus type 1, 3, 4, 5, and 6 detection in picornavirus cultures. J Clin Microbiol 46:759–762

    Article  PubMed Central  PubMed  Google Scholar 

  • Drexler JF, Grywna K, Stocker A, Abeysekera CH, Abeygunawardene A, Shimizu H, Khamrin P, Okitsu SH, Mizuguchi M, Ushijima H (2009) A novel human parechovirus from Brazil. Emerg Infect Dis 15:310–313

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Harvala H, Robertson I, McWilliam-Leitch EC, Benschop KC, Templeton K, Simmonds P (2008) Epidemiology and clinical associations of human parechovirus respiratory infections. J Clin Microbiol 46:3446–3453

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Harvala H, Robertson I, Chieochansin T, McWilliam-Leitch EC, Templeton K, Simmonds P (2009) Specific association of human parechovirus type 3 with sepsis and fever in young infants, as identified by direct typing of cerebrospinal fluid samples. J Infect Dis 199:1753–1760

    Article  CAS  PubMed  Google Scholar 

  • Harvala H, Wolthers KC, Simmonds P (2010) Parechoviruses in children: understanding a new infection. Curr Opin Infect Dis 23:224–230

    Article  PubMed  Google Scholar 

  • Ito M, Yamashita T, Tsuzuki H, Kabashima Y, Hasegawa A, Nagaya S, Kawaguchi M, Kobayashi S, Fujiura A, Sakae K, Minagawa H (2010) Detection of human parechoviruses from clinical stool samples in Aichi, Japan. J Clin Microbiol 48:2683–2688

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Legay V, Chomel JJ, Fernandez E, Lina B, Aymard M, Khalfan S (2002) Encephalitis due to human parechovirus type 1. J Clin Virol 25:193–195

    Article  PubMed  Google Scholar 

  • Mamishi S, Rahimi P , Sohrabi A , Sabuni F, Edalat R, Mostafavi E , Haghi Ashtiani MT , Azadmanesh K , Poorakbari B , MotamediRad M , Abdoli F (2013) Direct serotyping of enteroviruses in cerebrospinal fluid from children with aseptic meningitis. Jundishapur J Microbiol. doi:10.5812/jjm.7852

  • Nix WA, Oberste MS, Pallansch MA (2006) Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J Clin Microbiol 44:2698–2704

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Nix WA, Maher K, Niklasson B, Niklasson B, Lindberg AM, Pallansch MA, Oberste MS (2008) Detection of all known parechoviruses by real time-PCR. J Clin Microbiol 46(8):2519–2524

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Noordhoek GT, Weel JF, Poelstra E, Hooghiemstra M, Brandenburg AH (2008) Clinical validation of a new real-time PCR assay for detection of enteroviruses and parechoviruses, and implications for diagnostic procedures. J Clin Virol 41:75–80

    Article  CAS  PubMed  Google Scholar 

  • Oberste MS, Maher K, Kilpatrick DR, Pallansch MA (1999) Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J Virol 73:1941–1948

    CAS  PubMed Central  PubMed  Google Scholar 

  • Oberste MS, Maher K, Marchetti G, Flemister MR, Kilpatrick DR, Pallansch MA (2000) Comparison of classic and molecular approaches for the identification of untypeable enteroviruses. J Clin Microbiol 38(3):1170–1174

    CAS  PubMed Central  PubMed  Google Scholar 

  • Oberste MS, Nix WA, Maher K, Pallansch MA (2003) Improved molecular identification of enteroviruses by RT-PCR and amplicon sequencing. J Clin Virol 26:375–377

    Article  CAS  PubMed  Google Scholar 

  • Rahimi P, Tabatabaie H, Gouya MM, Mahmudi M, Musavi T, Samimi Rad K, MokhtariAzad T, Nategh R (2009) Direct identification of non-polio enteroviruses in residual paralysis cases by analysis of VP1 sequences. J Clin Virol 45(2):139–141

    Article  CAS  PubMed  Google Scholar 

  • Sedmak G, Nix WA, Jentzen J, Haupt TE, Davis JP, Bhattacharyya S, Pallansch MA, Oberste MS (2010) Infant deaths associated with human parechovirus infection in Wisconsin. CID 50:357–361

    Article  Google Scholar 

  • Selvarangan R, Nzabi M, Selvaraju SB, Ketter P, Carpenter C, Harrison CJ (2011) Human parechovirus 3 causing sepsis-like illness in children from Midwestern United States. Pediatr Infect Dis J 30:238–242

    Article  PubMed  Google Scholar 

  • Stanway G, Hyypia T (1999) Parechoviruses. J Virol 73:5249–5254

    CAS  PubMed Central  PubMed  Google Scholar 

  • Stanway G, Joki-Korpela P, Hyypiä T (2000) Human parechoviruses—biology and clinical significance. Rev Med Virol 10:57–69

    Article  CAS  PubMed  Google Scholar 

  • Thoelen I, Lemey P, Van Der Donck I, Beuselinck K, Lindberg AM, Van Ranst M (2003) Molecular typing and epidemiology of enteroviruses identified from an outbreak of aseptic meningitis in Belgium during the summer of 2000. J Med Virol 70(3):420–429

    Article  CAS  PubMed  Google Scholar 

  • van der Sanden S, de Bruin E, Vennema H, Swanink C, Koopmans M, van der Avoort H (2008) Prevalence of human parechovirus in the Netherlands in 2000 to 2007. J Clin Microbiol 46:2884–2889

    Article  PubMed Central  PubMed  Google Scholar 

  • Verboon-Maciolek MA, Krediet TG, Gerards LJ, de Vries LS, Groenendaal F, van Loon AM (2008) Severe neonatal parechovirus infection and similarity with enterovirus infection. Pediatr Infect Dis J 27(3):241–245

    Article  PubMed  Google Scholar 

  • Watanabe K, Oie M, Higuchi M, Nishikawa M, Fujii M (2007) Isolation and characterization of novel human parechovirus from clinical samples. Emerg Infect Dis 13:889–895

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Wolthers KC, Benschop KS, Schinkel J, Molenkamp R, Bergevoet RM, Spijkerman IJB, Kraakman HC, Pajkrt D (2008) Human parechovriuses as an important viral cause of sepsis-like illness and meningitis in young children. Clin Infect Dis 47:358–363

    Article  PubMed  Google Scholar 

  • Zhong H, Lin Y, Sun J, Su L, Cao L, Yang Y, Xu J (2011) Prevalence and genotypes of human parechovirus in stool samples from hospitalized children in Shanghai, China, 2008 and 2009. JMV 83:1428–1434

    Google Scholar 

Download references

Acknowledgments

We would like to greatly appreciate Professor Glyn Stanway (Department of Biological Sciences, University of Essex, UK) for kindly providing us with the positive control of HPeV1. We also wish to thank Professor W. Allan Nix (Centers for Disease Control and Prevention, Atlanta, USA) and Dr. Kimberley Benschop (National Institute of Public Health and the Environment, The Netherlands) for their great help and advice on this study. We thank Dr. K. Azadmanesh (Head of Department of Virology, Pasteur Institute of Iran), and Mrs. Z. Shahosseini (Department of Virology, Pasteur Institute of Iran) for their contribution to this study.

Funding

This project was supported by the Pasteur Institute of Iran under the project number 526.

Conflict of interests

None declared.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Pooneh Rahimi.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Rahimi, P., Naser, H.M., Siadat, S.D. et al. Genotyping of human parechoviruses in Iranian young children with aseptic meningitis and sepsis-like illness. J. Neurovirol. 19, 595–600 (2013). https://doi.org/10.1007/s13365-013-0221-7

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13365-013-0221-7

Keywords

Navigation