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Spectral Reproducibility and Quantification of Peptides in MALDI of Samples Prepared by Micro-Spotting

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Journal of The American Society for Mass Spectrometry

Abstract

Previously, we reported that MALDI spectra of peptides became reproducible when temperature was kept constant. Linear calibration curves derived from such spectral data could be used for quantification. Homogeneity of samples was one of the requirements. Among the three popular matrices used in peptide MALDI [i.e., α-cyano-4-hydroxycinnamic acid (CHCA), 2,5-dihydroxybenzoic acid (DHB), and sinapinic acid (SA)], homogeneous samples could be prepared by conventional means only for CHCA. In this work, we showed that sample preparation by micro-spotting improved the homogeneity for all three cases.

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References

  1. Hillenkamp, F., Peter-Katalinić, J.: MALDI MS. A practical guide to instrumentation, methods, and applications. pp. 1–28. Wiley-VCH, Weinheim, Germany (2007)

  2. Cole, R.B.: Electrospray and MALDI mass spectrometry. Fundamentals, instrumentation, practicalities, and biological applications, pp. 149–183. 2nd edn. John Wiley & Sons, Inc., Hoboken, New Jersey, USA (2010)

  3. Trimpin, S., Wang, B., Inutan, E.D., Li, J., Lietz, C.B., Harron, A., Pagnotti, V.S., Sardelis, D., McEwen, C.N.: A mechanism for ionization of nonvolatile compounds in mass spectrometry: Considerations from MALDI and inlet ionization. J. Am. Soc. Mass Spectrom. 23, 1644–1660 (2012)

    Article  CAS  Google Scholar 

  4. Duncan, M.W., Roder, H., Hunsucker, S.W.: Quantitative matrix-assisted laser desorption/ionization mass spectrometry. Brief. Funct. Geonomic. Proteomic. 7, 355–370 (2008)

    Article  CAS  Google Scholar 

  5. Bae, Y.J., Park, K.M., Kim, M.S.: Reproducibility of temperature-selected mass spectra in matrix-assisted laser desorption ionization of peptides. Anal. Chem. 84, 7107–7111 (2012)

    Article  CAS  Google Scholar 

  6. Yoon, S.H., Moon, J.H., Kim, M.S.: A comparative study of in- and post-source decays of peptide and preformed ions in matrix-assisted laser desorption ionization time-of-flight mass spectrometry: effective temperature and matrix effect. J. Am. Soc. Mass Spectrom. 21, 1876–1883 (2010)

    CAS  Google Scholar 

  7. Ahn, S.H., Park, K.M., Bae, Y.J., Kim, M.S.: Quantitative reproducibility of mass spectra in matrix-assisted laser desorption ionization and unraveling of the mechanism for gas-phase peptide ion formation. J. Mass Spectrom. 48, 299–305 (2013)

    Article  CAS  Google Scholar 

  8. Ahn, S.H., Park, K.M., Bae, Y.J., Kim, M.S.: Efficient methods to generate reproducible mass spectra in matrix-assisted laser desorption ionization of peptides. J. Am. Soc. Mass Spectrom. 24, 868–876 (2013)

    Article  CAS  Google Scholar 

  9. Kinsel, G.R., Yao, D., Yassin, F.H., Marynick, D.S.: Equilibrium conditions in laser-desorbed plumes: thermodynamic properties of α-cyano-4-hydroxycinnamic acid and protonation of amino acids. Eur. J. Mass Spectrom. 12, 359–367 (2006)

    Article  CAS  Google Scholar 

  10. Park, K.M., Bae, Y.J., Ahn, S.H., Kim, M.S.: A simple method for quantification of peptides and proteins by matrix-assisted laser desorption ionization mass spectrometry. Anal. Chem. 84, 10332–10337 (2012)

    Article  CAS  Google Scholar 

  11. Önnerfjord, P., Ekström, S., Bergquist, J., Nilsson, J., Laurell, T., Marko-Varga, G.: Homogeneous sample preparation for automated high throughput analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun. Mass Spectrom. 13, 315–322 (1999)

    Article  Google Scholar 

  12. Baluya, D.L., Garrett, T.J., Yost, R.A.: Automated MALDI matrix deposition method with inkjet printing for imaging mass spectrometry. Anal. Chem. 79, 6862–6867 (2007)

    Article  CAS  Google Scholar 

  13. Hensel, R.R., King, R.C., Owens, K.G.: Electrospray sample preparatioin for improved quantitation in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun. Mass Spectrom. 11, 1785–1793 (1997)

    Article  CAS  Google Scholar 

  14. Bae, Y.J., Shin, Y.S., Moon, J.H., Kim, M.S.: Degree of ionization in MALDI of peptides: thermal explanation for the gas-phase ion formation. J. Am. Soc. Mass Spectrom. 23, 1326–1335 (2012)

    Article  CAS  Google Scholar 

  15. Bae, Y.J., Yoon, S.H., Moon, J.H., Kim, M.S.: Optimization of reflectron for kinetic and mechanistic studies with multiplexed multiple tandem (MSn) time-of-flight mass spectrometry. Bull. Korean Chem. Soc. 31, 92–99 (2010)

    Article  CAS  Google Scholar 

  16. Moon, J.H., Yoon, S.H., Kim, M.S.: Temperature of peptide ions generated by matrix-assisted laser ionization and their kinetic parameters. J. Phys. Chem. B 113, 2071–2076 (2009)

    Article  CAS  Google Scholar 

  17. Tu, T., Dauter Jr., A.D., Sauter III, A.D., Gross, M.L.: Improving the signal intensity and sensitivity of MALDI mass spectrometry by using nanoliter spots deposited by induction-based fluidics. J. Am. Soc. Mass Spectrom. 19, 1086–1090 (2008)

    Article  CAS  Google Scholar 

  18. Chaurand, P., Schwartz, S.A., Caprioli, R.M.: Profiling and imaging proteins. Anal. Chem. 76, 86A–93A (2004)

    Article  CAS  Google Scholar 

  19. Pirman, D.A., Reich, R.F., Kiss, A., Heeren, R.M.A., Yost, R.A.: Quantitative MALDI tandem mass spectrometric imaging of cocaine from brain tissue with a deuterated internal standard. Anal. Chem. 85, 1081–1089 (2013)

    Article  CAS  Google Scholar 

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Acknowledgments

The authors acknowledge support for this work by the National Research Foundation of Korea (NRF) grant funded by the Korean government (MEST) (2013076408). K.M.P. and S.H.A. thank the Ministry of Education, Science, and Technology, Republic of Korea, for Brain Korea 21 Fellowship.

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Correspondence to Myung Soo Kim.

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Bae, Y.J., Park, K.M., Ahn, S.H. et al. Spectral Reproducibility and Quantification of Peptides in MALDI of Samples Prepared by Micro-Spotting. J. Am. Soc. Mass Spectrom. 25, 1502–1505 (2014). https://doi.org/10.1007/s13361-014-0919-7

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  • DOI: https://doi.org/10.1007/s13361-014-0919-7

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