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Distribution and diversity of viruses affecting cucurbit production in New South Wales, Australia

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Abstract

Cucurbits are an important crop grown across peri-urban, coastal and inland regions of New South Wales, Australia. Viral infection is a persistent issue across cucurbit commodities, different production methods and production regions. In this study, 34 cucurbit growing properties across five production regions of New South Wales were surveyed and sampled repeatedly from 2018 to 2021. Samples were tested for the presence of known endemic viruses using both serological and molecular diagnostic methods. Viral pathogens were detected on 22 of the 34 properties sampled, and in 44% of samples tested. Annual disease incidence ranged from 0 to 90%, typically increasing towards the end of the summer growing season. Papaya ringspot virus, watermelon mosaic virus, and cucumber mosaic virus, were identified as the most frequently detected viruses. Melon necrotic spot virus and beet pseudo yellows virus were detected at low rates. Cases of mixed infections of papaya ringspot virus and watermelon mosaic virus were also detected in some samples. Furthermore, cucumber green mottle mosaic virus, a “notifiable disease”, was detected for the first time in New South Wales. A newly described virus, watermelon crinkle leaf associated virus-1, was also detected using next- generation sequencing technology. The latter two virus records represent a geographic range expansion and first report for Australia respectively.

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References

  • Altschul S, Madden T, Schäffer A, Zhang J, Zhang Z, Miller W, Lipman D (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25(17):3389–3402

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Australian Plant Pest Database (APPD) (2019) http://www.appd.ala.org.au, accessed 23.11.2019.

  • Bankevich A, Nurk S, Antipov D, Gurevich A, Dvorkin M, Kulikov A, Lesin V, Nikolenko S, Pham S, Prjibelski A (2012) SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput 19(5):455–477

    CAS  Google Scholar 

  • Berendsen S, Oosterhof J (2015) TaqMan assays designed on the Coding sequence of the Movement protein of Cucumber green mottle mosaic virus for its detection in Cucurbit Seeds. Phytopathol 105(11):14–15

    Google Scholar 

  • BOM (2022) Bureau of Meteorology, http://www.bom.gov.au/climate/drought/archive.shtml, accessed 14.04.2022

  • Choi S, Choi J, Park W, Ryu K (1999) RT-PCR detection and identification of three species of cucumoviruses with a genus-specific single pair of primers. J Virol 83(1–2):67–73

    CAS  Google Scholar 

  • Choi G, Kim J, Kim J (2004) Soil transmission of Cucumber green mottle mosaic virus and its control measures in watermelon. Res Plant Dis 10:44–47

    Article  Google Scholar 

  • Clause HM (2015) Vegetable seeds for professionals [Catalogue]. Clause Vegetable Seeds

  • Contangelo P, Camele I, Malinconico P, & Rana G (1994) Epidemiological studies and control trials against CMV in Basilicata. Inf Agrar 50(29):49–55

    Google Scholar 

  • Coutts B, Jones R (2005) Incidence and distribution of viruses infecting cucurbit crops in the Northern Territory and Western Australia. Aust J Agric Res 56:847–858

    Article  Google Scholar 

  • Coutts B, Kehoe M, Jones R (2011) Minimizing losses caused by Zucchini yellow mosaic virus in vegetable cucurbit crops in tropical, subtropical and Mediterranean environments through cultural methods and host resistance. Virus Res 159(2):141–160

    Article  CAS  PubMed  Google Scholar 

  • Damicone J, Edelson J, Sherwood J, Myers L, Motes J (2007) Effects of border crops and intercrops on control of cucurbit virus diseases. Plant Dis 91:509–516

    Article  CAS  PubMed  Google Scholar 

  • Darzi E, Smith E, Shargil D, Lachman O, Ganot L, Dombrovsky A (2018) The honeybee Apis mellifera contributes to Cucumber green mottle mosaic virus spread via pollination. Plant Pathol 67:244–251

    Article  CAS  Google Scholar 

  • DAWE (2019) Pest Risk Analysis for Cucumber green mottle mosaic virus (CGMMV), Department of Agriculture, Water and the Environment. Accessed 2 September 2020. www.agriculture.gov.au/biosecurity/risk-analysis/plant/cucumber-green-mottle-mosaic-virus

  • Desbiez C, Lecoq H (1997) Review: Zucchini yellow mosaic virus. Plant Pathol 46:809–829

    Article  Google Scholar 

  • Dombrovsky A, Tran-Nguyen L, Jones R (2017) Cucumber green mottle mosaic virus: rapidly increasing global distribution, etiology, epidemiology and management. Annu Rev Phytopathol 55:231–256

    Article  CAS  PubMed  Google Scholar 

  • EPPO (2015) European and Mediterranean Plant Protection Organization: PM 7/125 (1) ELISA tests for viruses. EPPO Bull 45(3):445–449

    Article  Google Scholar 

  • Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirids by RT- PCR. J Virol 63:9–16

    CAS  Google Scholar 

  • Gibbs A, Mackenzie A, Wei K, Gibbs M (2008) The potyviruses of Australia. Arch Virol 153:1411–1420

    Article  CAS  PubMed  Google Scholar 

  • Harper S, Adiyoga W, Subandiyah S, Hidayat A, Gunadi N, Wibowo A, Sulistyaningsih E, Basuki R, Gunaeni N, Thomas J, Menzies N, Kenyon L, Kumar S, Hamill S, Gambley C, Persley D, McGrath D, Li M, Hall Z (2019) Final Report: Sustainable productivity improvements in allium and solanaceous vegetable crops in Indonesia and sub-tropical Australia. Australian Centre for International Agricultural Research. http://www.aciar.gov.au/sites/default/files/project-page-docs/final_report_smcn-2009-056_0.pdf

  • Hendricks K, Hernandez R, Roberts P, Isakeit T, Alabi O (2021) First report of watermelon crinkle leaf associated virus 1 (WCLaV-1) and WCLaV-2 in watermelon (Citrullus lanatus) plants coinfected with Cucurbit chlorotic yellows virus in Florida. Plant Dis. https://doi.org/10.1094/PDIS-06-21-1141-PDN. Online ahead of print. PMID: 34191533

  • Hernandez R, Isakeit T, Rwahnih M, Villegas C, Alabi O (2021) First report of watermelon crinkle leaf-associated virus 1 (WCLaV-1) and WCLaV-2 infecting watermelon (Citrullus lanatus) in the United States. Plant Dis, 105 (7), 2025. https://doi.org/10.1094/PDIS-02-21-0249-PDN

  • Horticulture Innovation Australia Limited (2020) Australian Horticulture Statistics Handbook: Vegetables 2019/20. Horticulture Innovation Australian Limited 2020

  • Hongyun C, Wenjun Z, Qinsheng G, Qing C, Shiming L, Shuifang Z (2008) Real time TaqMan RT-PCR assay for the detection of Cucumber green mottle mosaic virus. J Virol 149(2):326–329

    Google Scholar 

  • ICTV (2022) International committee on taxonomy of viruses, Master species list 2021, V2, https://ictv.global/msl (accessed 15 Sep 2022)

  • ISPM 10 (2016) International Standard for Phytosanitary Measures, requirements for the establishment of pest free places of production and pest free production sites. Int Plant Prot Convention, https://www.ippc.int/static/media/files/publication/en/2017/03/ISPM_10_1999_En_2015-12-22_PostCPM10_InkAmReformatted.pdf

  • Jones R (2004) Using epidemiological information to develop effective integrated virus disease management strategies. Virus Res 100:5–30

    Article  CAS  PubMed  Google Scholar 

  • Keogh R, Robinson A, Mullins I (2010) Pollination Aware: The Real Value of Pollination in Australia. Report prepared for Rural Industries Research and Development Corporation, RIRDC Publication No 10/081

  • Krueger F (2012) Trim Galore! Available online at: www.bioinformatics.babraham.ac.uk/projects/trim_galore

  • Langeveld S, Dore J, Memelink J, Derks A, van der Vlugt C, Asjes C, Bol J (1991) Identification of potyviruses using the polymerase chain reaction with degenerate primers. J Gen Virol 72:1531–1541

    Article  CAS  PubMed  Google Scholar 

  • Lecoq H, Desbiez C (2012) Viruses of cucurbit crops in the Mediterranean Region: an ever-changing picture. Adv Virus Res 84:67–126

    Article  PubMed  Google Scholar 

  • Lecoq H, Wisler G, Pitrat M (1998) Cucurbit viruses: the classics and the emerging. Cucurbitaceae ‘98: evaluation and enhancement of Cucurbit germplasm : 30 November-4 December 1998, Pacific Grove, Calif. / James D. McCreight, editor

  • Li J, Liu S, Gu Q (2016) Transmission efficiency of Cucumber green mottle mosaic virus via seeds, soil, pruning and irrigation water. J Phytopathol 164:300–309. https://doi.org/10.1111/jph.12457

    Article  Google Scholar 

  • Ling KS, Li R, Zhang W (2014) First report of Cucumber green mottle mosaic virus infecting greenhouse cucumber in Canada. Plant Dis 98:701. https://doi.org/10.1094/PDIS-09-13-0996-PDN

    Article  PubMed  Google Scholar 

  • Liu H, Luo L, Li J, Liu P, Chen X, Hao J (2014) Pollen and seed transmission of Cucumber green mottle mosaic virus in cucumber. Plant Pathol 63:72–77

    Article  CAS  Google Scholar 

  • Maeda M, Koyama L, Campos R, Kauffmann C, Osse de Souza J, Gilbertson R, Inoue-Nagata A, Freitas D, Nogueira D, Melo F, Nagata T (2021) First report of watermelon crinkle leaf-associated virus 1 and 2 infecting watermelon (Citrullus lanatus) plants in Brazil. Plant Dis. https://doi.org.10.1094/PDIS-06-21-1325-PDN. Online ahead of print. PMID: 34455800

  • Marino A, Garrido M, Borges O, Gonzalez A (2010) Identification of a viral disease that affects maize in Villa de Cura, Aragua State, Venezuela. Fitopatología Venez 23(1):22–27

    Google Scholar 

  • Mulholland S, Wildman O, Kinoti W, Constable F, Daly A, Tesoriero L, Maina S, Chapman T (2022) First report of watermelon crinkle leaf associated virus-1 (WCLaV-1) in watermelon (Citrullus lanatus) in Australia. J Plant Pathol. https://doi.org/10.1007/s42161-022-01250-8

    Article  Google Scholar 

  • Park J, Jang T, Song S, Choi H, Ko S (2010) Studies on the soil transmission of CGMMV and its control with crop rotation. Korean J Pesticide Sci 14:473–477

    Google Scholar 

  • Persley D (2012) Integrated viral disease management in vegetable crops. Horticulture Australia Limited. Final Report VG07128

  • Pilkington L (2011) Regional extension strategy for managing western flower thrips and tomato spotted wilt virus in the Sydney Region. Horticulture Australia Limited. Final Report VG03098

  • Reingold V, Lachman O, Blaosov E, Dombrovsky A (2015) Seed disinfection treatments do not sufficiently eliminate the infectivity of Cucumber green mottle mosaic virus (CGMMV) on cucurbit seeds. Plant Pathol 62(2):245–255

    Article  Google Scholar 

  • Shargil D, Zemach H, Belausov E, Lachman O, Luria N, Molad O, Smith E, Kamenetsky R, Dombrovsky A (2019) Insights into the maternal pathway for Cucumber green mottle mosaic virus infection of cucurbit seeds. Protoplasma 256:1109–1118. https://doi.org/10.1007/s00709-019-01370-6

    Article  CAS  PubMed  Google Scholar 

  • Sharma A, Katoch V, Rana C (2016) Important Diseases of Cucurbitaceous crops and their management. Chapter 18, handbook of Cucurbits. Growth, Cultural Practices and Physiology

  • Simmons H, Dunham J, Zinn K, Munkvold G, Holmes E, Stephenson A (2013) Zucchini yellow mosaic virus (ZYMV, Potyvirus): Vertical transmission, seed infection and cryptic infections. Virus Res 176:259–264

    Article  CAS  PubMed  Google Scholar 

  • Tesoriero L, Chambers G, Srivastava M, Smith S, Conde B, Tran-Nguyen L (2016) First report of Cucumber green mottle mosaic virus in Australia. Australas Plant Dis Notes 11:1. https://doi.org/10.0007/s13314-015-0186-x

    Article  Google Scholar 

  • Tessitori M, Reina A, Catara V, Polizzi G (2002) Polygala myrtifolia as a new natural host of Cucumber mosaic virus. Eur J Plant Pathol 86(12):1403

    CAS  Google Scholar 

  • Tzanetakis I, Martin R (2004) First Report of Beet pseudo yellows virus in Blackberry in the United States. Plant Dis 88(2):223. https://doi.org/10.1094/PDIS.2004.88.2.223C

    Article  CAS  PubMed  Google Scholar 

  • Ward C, Shukla D (1991) Taxonomy of potyviruses: current problems and some solutions. Intervirology 32(5):269–296

    Article  CAS  PubMed  Google Scholar 

  • Xin M, Cao M, Liu W, Ren Y, Zhou X, Wang X (2017) Two negative-strand RNA viruses identified in watermelon represent a novel clade in the Order Bunyavirales. Front Microbiol 8:1514. https://doi.org/10.3389/fmicb.2017.01514

    Article  PubMed  PubMed Central  Google Scholar 

  • Yoon J, Palukaitis P, Choi S (2019) Host range. In: Palukaitis P, Garcia-Arenal F (eds) Cucumber mosaic virus. American Phytopathological Society Press, pp 15–18

  • Zhang S, Tian X, Navarro B, Serio F, Cao M (2021) Watermelon crinkle leaf-associated virus 1 and Watermelon crinkle leaf-associated virus 2 have a bipartite genome with molecular signatures typical of the members of the genus Coguvirus (family Phenuiviridae). Arch Virol 166:2829–2834

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

This research was conducted as part of the Area Wide Management of Vegetable Diseases project funded by Hort Innovation, using the Hort Innovation vegetable research and development levy, with co-investment from NSW DPI and contributions from the Australian Government. The assistance of the Agriculture Victoria Research laboratories is acknowledged with thanks for supporting next generation sequencing work. Dr Bernie Dominiak, Dr David Guest and Dr Nerida Donovan reviewed and improved an earlier version of this manuscript.

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Mulholland, S., Wildman, O., Daly, A. et al. Distribution and diversity of viruses affecting cucurbit production in New South Wales, Australia. Australasian Plant Pathol. 52, 339–351 (2023). https://doi.org/10.1007/s13313-023-00925-9

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