Skip to main content
Log in

Robust Functional Principal Component Analysis Based on a New Regression Framework

  • Published:
Journal of Agricultural, Biological and Environmental Statistics Aims and scope Submit manuscript

Abstract

It is of great interest to conduct robust functional principal component analysis (FPCA) that can identify the major modes of variation in the stochastic process with the presence of outliers. A new robust FPCA method is proposed in a new regression framework. An M-estimator for the functional principal components is developed based on the Huber’s loss by iteratively fitting the residuals from the Karhunen–Lovève expansion for the stochastic process under the robust regression framework. Our method can naturally accommodate sparse and irregularly-sampled data. When the functional data have outliers, our method is shown to render stable and robust estimates of the functional principal components; when the functional data have no outliers, we show via simulation studies that the performance of our approach is similar to that of the conventional FPCA method. The proposed robust FPCA method is demonstrated by analyzing the Hawaii ocean oxygen data and the kidney glomerular filtration rates for patients after renal transplantation.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Bali JL, Boente G, Tyler DE, Wang J-L (2011) Robust functional principal components: a projection-pursuit approach. Ann Stat 39:2852–2882

    Article  MathSciNet  Google Scholar 

  • Boente G, Salibian-Barrera M (2015) S-estimators for functional principal component analysis. J Am Stat Assoc 110:1100–1111

    Article  MathSciNet  Google Scholar 

  • Boente G, Salibian-Barrera M (2020) Robust functional principal components for sparse longitudinal data. arXiv:2012.01540 [stat.ME]

  • Billor N, Hadi AS, Velleman PF (2000) BACON: blocked adaptive computationally efficient outlier nominators. Comput Stat Data Anal 34:279–298

    Article  Google Scholar 

  • Dauxois J, Pousse A, Romain Y (1982) Asymptotic theory for the principal component analysis of a vector random function: some applications to statistical inference. J Multivar Anal 12:136–154

    Article  MathSciNet  Google Scholar 

  • Dong J, Wang L, Gill J, Cao J (2018) Functional principal component analysis of GFR curves after kidney transplant. Stat Methods Med Res 27:3785–3796

    Article  MathSciNet  Google Scholar 

  • Ferraty F, Vieu P (2006) Nonparametric functional data analysis: methods, theory, applications and implementations. Springer-Verlag, London

    MATH  Google Scholar 

  • Gervini D (2008) Robust functional estimation using the median and spherical principal components. Biometrika 95:587–600

    Article  MathSciNet  Google Scholar 

  • Gervini D (2009) Detecting and handling outlying trajectories in irregularly sampled functional datasets. Ann Appl Stat 3:1758–1775

    Article  MathSciNet  Google Scholar 

  • Hall P, Horowitz JL (2007) Methodology and convergence rates for functional linear regression. Ann Stat 35:70–91

    MathSciNet  MATH  Google Scholar 

  • Hormann S, Kidzinski L, Hallin M (2015) Dynamic functional principal components. J R Stat Soc Ser B (Stat Methodol) 77:319–348

    Article  MathSciNet  Google Scholar 

  • Huber PJ, Ronchetti EM (2009) Robust statistics, 2nd edn. Wiley, Hoboken

    Book  Google Scholar 

  • Hubert M, Rousseeuw PJ, Branden KV (2005) ROBPCA: a new approach to robust principal component analysis. Technometrics 47:64–79

    Article  MathSciNet  Google Scholar 

  • Hubert M, Vandervieren E (2008) An adjusted boxplot for skewed distributions. Comput Stat Data Anal 52:5186–5201

    Article  MathSciNet  Google Scholar 

  • Hyndman RJ, Ullah S (2007) Robust forecasting of mortality and fertility rates: a functional data approach. Comput Stat Data Anal 51:4942–4956

    Article  MathSciNet  Google Scholar 

  • Lee S, Shin H, Billor N (2013) M-type smoothing spline estimators for principal functions. Comput Stat Data Anal 66:89–100

    Article  MathSciNet  Google Scholar 

  • Lin Z, Wang L, Cao J (2016) Interpretable functional principal component analysis. Biometrics 72:846–854

    Article  MathSciNet  Google Scholar 

  • Mas A (2002) Weak convergence for the covariance operators of a Hilbertian linear process. Stoch Process their Appl 99:117–135

    Article  MathSciNet  Google Scholar 

  • Nie Y, Cao J (2020) Sparse functional principal component analysis in a new regression framework. Comput Stat Data Anal 152:107016

    Article  MathSciNet  Google Scholar 

  • Nie Y, Wang L, Liu B, Cao J (2018) Supervised functional principal component analysis. Stat Comput 28:713–723

    Article  MathSciNet  Google Scholar 

  • Pitselis G (2013) A review on robust estimators applied to regression credibility. J Comput Appl Math 239:231–249

    Article  MathSciNet  Google Scholar 

  • Ramsay JO, Dalzell C (1991) Some tools for functional data analysis. J R Stat Soc Ser B 53:539–572

    MathSciNet  MATH  Google Scholar 

  • Ramsay JO, Silverman BW (2005) Functional data analysis, 2nd edn. Springer-Verlag, New York

    Book  Google Scholar 

  • Rousseeuw PJ, Leroy AM (2005) Robust regression and outlier detection. Wiley, Hoboken

    MATH  Google Scholar 

  • Salvadori M, Rosati A, Bock A, Chapman J, Dussol B, Fritsche L, Kliem V, Lebranchu Y, Oppenheimer F, Pohanka E, Tufveson G, Bertoni E (2006) Estimated one-year glomerular filtration rate is the best predictor of long-term graft function following renal transplant. Transplantation 81:202–206

    Article  Google Scholar 

  • Salibian-Barrera M (2006) The asymptotics of MM-estimators for linear regression with fixed designs. Metrika 63:283–294

    Article  MathSciNet  Google Scholar 

  • Sang P, Wang L, Cao J (2017) Parametric functional principal component analysis. Biometrics 73:802–810

    Article  MathSciNet  Google Scholar 

  • Sawant P, Billor N, Shin H (2012) Functional outlier detection with robust functional principal component analysis. Comput Stat 27:83–102

    Article  MathSciNet  Google Scholar 

  • Shi H, Dong J, Wang L, Cao J (2021) Functional principal component analysis for longitudinal data with informative dropout. Stat Med 40:712–724

    Article  MathSciNet  Google Scholar 

  • Silverman BW (1996) Smoothed functional principal components analysis by choice of norm. Ann Stat 24:1–24

    Article  MathSciNet  Google Scholar 

  • Yao F, Müller HG, Wang JL (2005) Functional data analysis for sparse longitudinal data. J Am Stat Assoc 100:577–590

    Article  MathSciNet  Google Scholar 

  • Yohai VJ (1987) High breakdown point and high efficiency robust estimates for regression. Ann Stat 20:642–656

    MathSciNet  MATH  Google Scholar 

Download references

Acknowledgements

The authors would like to thank the Editor, the Associate Editor, and two reviewers for their valuable comments, which are very helpful to improve this work. This work was supported by the discovery grants from the Natural Sciences and Engineering Research Council of Canada (NSERC) to J. Cao and H. Shi.

Funding

Funding was provided by Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada (Grand No. RGPIN-2018-06008)

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jiguo Cao.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary file 1 (pdf 132 KB)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Shi, H., Cao, J. Robust Functional Principal Component Analysis Based on a New Regression Framework. JABES 27, 523–543 (2022). https://doi.org/10.1007/s13253-022-00495-1

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13253-022-00495-1

Keywords

Navigation