Abstract
It is of great interest to conduct robust functional principal component analysis (FPCA) that can identify the major modes of variation in the stochastic process with the presence of outliers. A new robust FPCA method is proposed in a new regression framework. An M-estimator for the functional principal components is developed based on the Huber’s loss by iteratively fitting the residuals from the Karhunen–Lovève expansion for the stochastic process under the robust regression framework. Our method can naturally accommodate sparse and irregularly-sampled data. When the functional data have outliers, our method is shown to render stable and robust estimates of the functional principal components; when the functional data have no outliers, we show via simulation studies that the performance of our approach is similar to that of the conventional FPCA method. The proposed robust FPCA method is demonstrated by analyzing the Hawaii ocean oxygen data and the kidney glomerular filtration rates for patients after renal transplantation.
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References
Bali JL, Boente G, Tyler DE, Wang J-L (2011) Robust functional principal components: a projection-pursuit approach. Ann Stat 39:2852–2882
Boente G, Salibian-Barrera M (2015) S-estimators for functional principal component analysis. J Am Stat Assoc 110:1100–1111
Boente G, Salibian-Barrera M (2020) Robust functional principal components for sparse longitudinal data. arXiv:2012.01540 [stat.ME]
Billor N, Hadi AS, Velleman PF (2000) BACON: blocked adaptive computationally efficient outlier nominators. Comput Stat Data Anal 34:279–298
Dauxois J, Pousse A, Romain Y (1982) Asymptotic theory for the principal component analysis of a vector random function: some applications to statistical inference. J Multivar Anal 12:136–154
Dong J, Wang L, Gill J, Cao J (2018) Functional principal component analysis of GFR curves after kidney transplant. Stat Methods Med Res 27:3785–3796
Ferraty F, Vieu P (2006) Nonparametric functional data analysis: methods, theory, applications and implementations. Springer-Verlag, London
Gervini D (2008) Robust functional estimation using the median and spherical principal components. Biometrika 95:587–600
Gervini D (2009) Detecting and handling outlying trajectories in irregularly sampled functional datasets. Ann Appl Stat 3:1758–1775
Hall P, Horowitz JL (2007) Methodology and convergence rates for functional linear regression. Ann Stat 35:70–91
Hormann S, Kidzinski L, Hallin M (2015) Dynamic functional principal components. J R Stat Soc Ser B (Stat Methodol) 77:319–348
Huber PJ, Ronchetti EM (2009) Robust statistics, 2nd edn. Wiley, Hoboken
Hubert M, Rousseeuw PJ, Branden KV (2005) ROBPCA: a new approach to robust principal component analysis. Technometrics 47:64–79
Hubert M, Vandervieren E (2008) An adjusted boxplot for skewed distributions. Comput Stat Data Anal 52:5186–5201
Hyndman RJ, Ullah S (2007) Robust forecasting of mortality and fertility rates: a functional data approach. Comput Stat Data Anal 51:4942–4956
Lee S, Shin H, Billor N (2013) M-type smoothing spline estimators for principal functions. Comput Stat Data Anal 66:89–100
Lin Z, Wang L, Cao J (2016) Interpretable functional principal component analysis. Biometrics 72:846–854
Mas A (2002) Weak convergence for the covariance operators of a Hilbertian linear process. Stoch Process their Appl 99:117–135
Nie Y, Cao J (2020) Sparse functional principal component analysis in a new regression framework. Comput Stat Data Anal 152:107016
Nie Y, Wang L, Liu B, Cao J (2018) Supervised functional principal component analysis. Stat Comput 28:713–723
Pitselis G (2013) A review on robust estimators applied to regression credibility. J Comput Appl Math 239:231–249
Ramsay JO, Dalzell C (1991) Some tools for functional data analysis. J R Stat Soc Ser B 53:539–572
Ramsay JO, Silverman BW (2005) Functional data analysis, 2nd edn. Springer-Verlag, New York
Rousseeuw PJ, Leroy AM (2005) Robust regression and outlier detection. Wiley, Hoboken
Salvadori M, Rosati A, Bock A, Chapman J, Dussol B, Fritsche L, Kliem V, Lebranchu Y, Oppenheimer F, Pohanka E, Tufveson G, Bertoni E (2006) Estimated one-year glomerular filtration rate is the best predictor of long-term graft function following renal transplant. Transplantation 81:202–206
Salibian-Barrera M (2006) The asymptotics of MM-estimators for linear regression with fixed designs. Metrika 63:283–294
Sang P, Wang L, Cao J (2017) Parametric functional principal component analysis. Biometrics 73:802–810
Sawant P, Billor N, Shin H (2012) Functional outlier detection with robust functional principal component analysis. Comput Stat 27:83–102
Shi H, Dong J, Wang L, Cao J (2021) Functional principal component analysis for longitudinal data with informative dropout. Stat Med 40:712–724
Silverman BW (1996) Smoothed functional principal components analysis by choice of norm. Ann Stat 24:1–24
Yao F, Müller HG, Wang JL (2005) Functional data analysis for sparse longitudinal data. J Am Stat Assoc 100:577–590
Yohai VJ (1987) High breakdown point and high efficiency robust estimates for regression. Ann Stat 20:642–656
Acknowledgements
The authors would like to thank the Editor, the Associate Editor, and two reviewers for their valuable comments, which are very helpful to improve this work. This work was supported by the discovery grants from the Natural Sciences and Engineering Research Council of Canada (NSERC) to J. Cao and H. Shi.
Funding
Funding was provided by Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada (Grand No. RGPIN-2018-06008)
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Shi, H., Cao, J. Robust Functional Principal Component Analysis Based on a New Regression Framework. JABES 27, 523–543 (2022). https://doi.org/10.1007/s13253-022-00495-1
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DOI: https://doi.org/10.1007/s13253-022-00495-1