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Impact of heavy metals on water quality and indigenous Bacillus spp. prevalent in rat-hole coal mines

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Abstract

The present study reports pollution evaluation indices employed to assess the intensity of metal pollution in water systems affected by acid mine drainage from rat-hole coal mines prevalent in North-east India. The concentration of seven eco-toxic metals was evaluated from coal mine waters which showed concentration order of Iron (Fe) > Manganese (Mn) > Zinc (Zn) > Chromium (Cr) > Lead (Pb) > Copper (Cu) > Cadmium (Cd). The water samples were acidic with mean pH 2.67 and burdened with dissolved solids (924.8 mg/L). The heavy metal pollution index (HPI) and heavy metal evaluation index (HEI) displayed high and medium range of pollution level in majority of the water samples. Statistical correlation suggested strong positive correlation between metals such as Cr with Mn (r = 0.780), Mn with Fe (r = 0.576), Cr with Fe (r = 0.680), Pb with Mn (r = 0.579) and Cr with Pb (r = 0.606), indicating Mn, Pb, Fe and Cr to be major metal contaminants; an unequivocal affirmation of degradation in water quality. The sampled waters had lower heavy metal concentration during monsoon and post-monsoon seasons. The commonly occurring bacterial species Bacillus pseudomycoides and Bacillus siamensis were chosen to understand their behavioral responses toward metal contamination. Findings demonstrated that Bacillus spp. from control environment had low tolerance to metals stress as evident from their MTC, MIC and growth curve studies. The survival of the native isolates across varying pH, salinity and temperature in the coal mine areas suggest these isolates as promising candidates for reclamation of rat-hole coal mining sites.

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References

  • Aleem A, Isar J, Malik A (2003) Impact of long-term application of industrial wastewater on the emergence of resistance traits in Azotobacter chroococcum isolated from rhizospheric soil. Bioresour Technol 86(1):7–13

    Article  CAS  PubMed  Google Scholar 

  • Baruah BP, Saikia BK, Kotoky P, Rao PG (2006) Aqueous leaching of high sulfur sub-bituminous coals in Assam, India. Energy Fuels 20:1550–1555

    Article  CAS  Google Scholar 

  • Baruah J, Baruah BK, Kalita S, Choudhury SK (2016) Physico-Chemical characteristics of drain-water of open cast coal mining area in the Ledo-Margherita range of Assam. Clarion 5(2):30–35

    Google Scholar 

  • Bhuiyan MAH, Islam MA, Dampare SB, Parvez L, Suzuki S (2010) Evaluation of hazardous metal pollution in irrigation and drinking water systems in the vicinity of a coal mine area of northwestern Bangladesh. J Harzard Mater 179:1065–1077

    Article  CAS  Google Scholar 

  • BIS (2012) (Bureau of Indian Standards) Drinking water specifications 2nd revision. Bureau of Indian Standards (IS 10500: 2012). New Delhi

  • Buchanan RE, Gibbon NE (1974) Bergey’s Manual of Determinative Bacteriology, 8th edn. The Williams and Wilkin’s Co, Baltimore, pp 1246–1249

    Google Scholar 

  • Chabukdhara M, Singh OP (2016) Coal mining in northeast India: an overview of environmental issues and treatment approaches. Int J Coal Sci Technol 3:87–96

    Article  CAS  Google Scholar 

  • Chandra A, Jain M (2013) Evaluation of Heavy Metals Contamination due to Overburden Leachate in Groundwater of Coal Mining Area. J Chem Biol Phys Sci 3(3):2317–2322

    CAS  Google Scholar 

  • Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, Lim YW (2007) EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Systc Evol Microbiol 57(10):2259–2261

    Article  CAS  Google Scholar 

  • Cristani M, Naccari C, Nostro A, Pizzimenti A, Trombetta D, Pizzimenti F (2012) Possible use of Serratia marcescens in toxic metal biosorption (removal). Environ Sci Pollut Res 19(1):161–168

    Article  CAS  Google Scholar 

  • Das M, Ramanujam R (2011) Metal content in water and in green filamentous Algae Microspora quadrata Hazen from Coal Mine Impacted Streams of Jaintia Hills District, Meghalaya. India Int Journal Botany 7(2):170–176

    Article  CAS  Google Scholar 

  • Devika L, Rajaram R, Mathivanan K (2013) Multiple heavy metal and antibiotic tolerance bacteria isolated from Equatorial Indian Ocean. Int J MicriobiolRes 4(3):212–218

    CAS  Google Scholar 

  • Edet AE, Offiong OE (2002) Evaluation of water quality pollution indices for heavy metal contamination monitoring. A study case from Akpabuyo-Odukpani area, Lower Cross River Basin (southeastern Nigeria). Geo Journal 57:295–304

    Google Scholar 

  • Edwards KJ, Gihring TM, Banfield JF (1999) Seasonal variations in microbial populations and environmental conditions in an extreme acid mine drainage environment. Appl Environ Microbiol 65(8):3627–3632

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gogoi J, Pathak N, Dowrah J, Boruah HPD (2007) In situ selection of tree species in environmental restoration of open cast coal mine wasteland. proceedings of Int Sem on MPT, allied publishers. pp 678–681

  • Hatar H, Rahim SA, Razi WM, Sahrani FK (2013) Heavy metals content in acid mine drainage at abandoned and active mining area. AIP Conf Proc 1571:641–646

    Article  CAS  Google Scholar 

  • Jamal Q, Ahmed I, Rehman SU, Abbas S, Kim KY, Anees M (2016) Isolation and characterization of bacteria from coal mines of Dara Adam Khel, Pakistan. Geomicrobiol J 33(1):1–9

    Article  CAS  Google Scholar 

  • Jenkins DJ, Stekel DJ (2010) De novo evolution of complex, global and hierarchical gene regulatory mechanisms. J Mol Evol 71(2):128–140

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Joseph SJ, Hugenholtz P, Sangwan P, Osborne CA, Janssen PH (2003) Laboratory cultivation of widespread and previously uncultured soil bacteria. Appl Environ Microbiol 69(12):7210–7215

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kalantari N (2008) Evaluation of toxicity of iron, chromium and cadmium on Bacillus cereus growth. Iran J Basic Med Sci 10(36):222–228

    CAS  Google Scholar 

  • Kalita D, Joshi SR (2017) Study on bioremediation of Lead by exopolysaccharide producing metallophilic bacterium isolated from extreme habitat. Biotechnol Rep 13:48–57

    Article  Google Scholar 

  • Ka-ot AL, Banerjee S, Haldar G, Joshi SR (2017) Acid and heavy metal tolerant Bacillus sp. from rat-hole coal mines of Meghalaya, India. Natl Acad Sci India Sect B Biol Sci 88(3):1187–1198

    Article  CAS  Google Scholar 

  • Khan R, Israili SH, Ahmad H, Mohan A (2005) Heavy metal pollution assessment in surface water bodies and its suitability for irrigation around the Neyveli lignite mines and associated industrial complex, Tamil Nadu, India. Mine Water Environ 24:155–161

    Article  CAS  Google Scholar 

  • Kumar A, Bisht B, Joshi V (2011) Bioremediation potential of three acclimated bacteria with reference to heavy metal removal from waste. Int J Environ Sci 2(2):896–908

    CAS  Google Scholar 

  • Luo G, Shi Z, Wang H, Wang G (2012) Skermanella stibiiresistens sp. nov., a highly antimony-resistant bacterium isolated from coal mining soil, and emended description of the genus Skermanella. Int J Syst Evol Micrbiol 62(6):1271–1276

    Article  CAS  Google Scholar 

  • Ma Y, Prasad M, Rajkumar M, Freitas H (2011) Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils. Biotechnol Adv 29:248–258

    Article  CAS  PubMed  Google Scholar 

  • Mahato MK, Singh G, Singh PK, Singh AK, Tiwari AK (2017) Assessment of mine water quality using heavy metal pollution index in a coal mining area of Damodar river basin. India Bull Environ Contam Toxicol 99(1):54–61

    Article  CAS  PubMed  Google Scholar 

  • Majumder P, Palit D (2016) Microbial diversity of soil in some coal mine generated wasteland of raniganj coalfield, West Bengal, India. Int J Curr Microbiol Appl Sci 5(2):637–641

    Article  CAS  Google Scholar 

  • Méndez-García C, Peláez AI, Mesa V, Sánchez J, Golyshina OV, Ferrer M (2015) Microbial diversity and metabolic networks in acid mine drainage habitats. Front Microbiol 6:1–17

    Google Scholar 

  • Mohapatra RK, Parhi PK, Pandey S, Bindhani BK, Thatoi H, Panda CR (2019) Active and passive biosorption of Pb(II)using live and dead biomass of marine bacterium Bacillus xiamenensis PbRPSD202: Kinetics and isotherm studies. J Environ Manage 247:121–134

    Article  CAS  PubMed  Google Scholar 

  • Monballiu A, Cardon N, Nguyen MT, Cornelly C, Meesschaert B, Chiang YW (2015) Tolerance of chemoorganotrophic bioleaching microganisms to heavy metal and alkaline stresses. Bioinorg Chem Appl 2015:9

    Article  CAS  Google Scholar 

  • Nongkhlaw M, Kumar R, Acharya C, Joshi SR (2012) Occurrence of horizontal gene transfer of PIB-type ATPase genes among bacteria isolated from uranium rich deposit of domiasiat in North East India. PLoS ONE 7(10):e48199

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Plumlee GS, Smith KS, Montour MR, Ficklin WH, Mosier EL (1999) Geologic Controls on the Composition of Natural Waters and Mine Waters Draining Diverse Mineral-Deposit Types. In: L.H. Filipek and G.S. Plumlee (Eds.), The Environmental Geochemistry of Mineral Deposits, Part B: Case Studies and Research Topics, Reviews in Economic Geology Vol. 6B, Society of Economic Geologists, Inc, pp 373–432

  • Prasad B, Mondal KK (2008) The impact of filling an abandoned open cast mine with fly ash on groundwater quality: a case study. Mine Water Environ 27:40–45

    Article  CAS  Google Scholar 

  • Prasad B, Kumari P, Bano S, Kumari S (2014) Ground water quality evaluation near mining area and development of heavy metal pollution index. Appl Water Sci 4:11–17

    Article  CAS  Google Scholar 

  • Prasanna MV, Chitambaram S, Hameed AS, Srinivasamoorthy K (2011) Hydrogeochemical analysis and evaluation of groundwater quality in the Gadilam river basin, Tamil Nadu. India J Earth Syst Sci 120(1):85–98

    Article  CAS  Google Scholar 

  • Radulescu C, Dulama ID, Stihi C, Ionita I, Chilian A, Necula C, Chelarescu ED (2014) Determination of heavy metal levels in water and therapeutic mud by atomic absorption spectrometry. Rom J Phys 59(9–10):1057–1066

    Google Scholar 

  • Rani N, Sharma HR, Kaushik A, Sagar A (2018) Bioremediation of mined waste land. In: Hussain C. (eds) Handbook of environmental materials management. Springer, Cham. https://doi.org/https://doi.org/10.1007/978-3-319-73645-7_79

  • Ray S, Dey K (2020) Coal mine water drainage: the current status and challenges. J Inst Eng India Ser D 101:165–172

    Article  CAS  Google Scholar 

  • Rayment GE, Higginson FR (1992) Australian soil and land survey handbook Soil chemical methods: Australasia. Australian soil and land survey handbook. Inkata Press, Port Melbourne, pp 1–3

    Google Scholar 

  • Roohi A, Ahmed I, Paek J, Sin Y, Abbas S, Jamil M, Chang YH (2014) Bacillus pakistanensis sp. Nov., a halotolerant bacterium isolated from salt mines of the Karak Area in Pakistan. Anton Leeuw Int J G 105(6):1163–1172

    Article  CAS  Google Scholar 

  • Sahoo PK, Tripathy S, Equeenuddin SM, Panigrahi MK (2012) Geochemical characteristics of coal mine discharge vis-à-vis behavior of rare earth elements at Jaintia Hills coalfield, northeastern India. J Geochem Explor 112:235–243

    Article  CAS  Google Scholar 

  • Samanta A, Bera P, Khatun M, Sinha C, Pal P (2012) An investigation on heavy metal tolerance and antibiotic resistance properties of bacterial strain Bacillus sp. isolated from municipal waste. J Microbiol Biotechnol Res 2(1):178–189

    CAS  Google Scholar 

  • Shakoori FR, Tabassum S, Rehman A, Shakoori AR (2010) Isolation and characterization of Cr6+ reducing bacteria and their potential use in bioremediation of chromium containing wastewater. Pakistan J Zool 42(6):651–658

    CAS  Google Scholar 

  • Shylla L, Barik SK, Joshi SR (2020) Impact assessment of heavy metal contamination on water quality of underground and open-cast coal mines. NEHU J 18(2):58–72

    Google Scholar 

  • Singh G, Kamal RK (2017) Heavy metal contamination and its indexing approach for groundwater of Goa mining region, India. Appl Water Sci 7:1479–1485

    Article  CAS  Google Scholar 

  • Swer S, Singh OP (2005) Water pollution in coal mining areas of Jaintia hills, Meghalaya and its impact on benthic macroinvertebrates. In: Singh OP (ed) Mining environment problems and remedies. Regency publications, New Delhi, pp 57–69

    Google Scholar 

  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731–2739

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Upadhyay N, Vishwakarma K, Singh J, Mishra M, Kumar V, Rani R, Mishra RK, Chauhan DK, Tripathi DK, Sharma S (2017) Tolerance and reduction of chromium(VI) by Bacillus sp. MNU16 isolated from contaminated coal mining soil. Front Plant Sci 8:1–13

    Article  Google Scholar 

  • Vashishth A, Khanna S (2015) Toxic heavy metals tolerance in bacterial isolates based on their inducible mechanism. Int J Novel Res Life Sci 2(1):34–41

    Google Scholar 

  • W.H.O (World Health Organization) (2011) Guidelines for drinking water quality. World Health Organization, Geneva

  • Weisburg WG, Barns SM, Pelletier DA, Lane DJ (1991) 16S Ribosomal DNA amplification for phylogenetic study. J Bacteriol 173:697–703

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yao Z, Li J, Xie H, Yu C (2012) Review on remediation technologies of soil contaminated by heavy metals. Proced Environ Sci 16:722–729

    Article  CAS  Google Scholar 

  • Zhou J, Dang Z, Cai MF, Liu CQ (2007) Soil heavy metal pollution around the Dabaoshan mine, Guangdong province. China Pedosphere 17(5):588–594

    Article  CAS  Google Scholar 

Download references

Acknowledgements

Authors acknowledge the financial support received from MoEF& CC, Govt of India (MoEFCC- NMHS/LG-2016/005) in the form of the research project. LS and SRJ thank DST-FIST[SR/FST/LSI-666/2016(C)] and UGC-SAP[F.4-7/2016/DRS-1(SAP-II)] for financial support to the parent department.

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LS, DA, AU, HS and NT conducted the study. SRJ, SKB, MDB and KS designed the study. LS and SRJ wrote and analyzed the data.

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Correspondence to Santa Ram Joshi.

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The authors have no conflict of interest to declare that are relevant to this article.

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The sequences of the indigenous Bacillus spp. (SS1-18, C-15, TW2-22, WC-3) analyzed in this study, have been deposited in the Genbank database bearing Accession Numbers—MK372148.1, MK373765.1, MN448390.1 and MN448452.1.

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Shylla, L., Barik, S.K., Behera, M.D. et al. Impact of heavy metals on water quality and indigenous Bacillus spp. prevalent in rat-hole coal mines. 3 Biotech 11, 253 (2021). https://doi.org/10.1007/s13205-021-02808-6

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