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Development and characterization of 26 SNP markers in Nipponacmea schrenckii

  • Jiangyong QuEmail author
  • Shanshan Wang
  • Yutong Cui
  • Xiaoyu Guo
  • Yunhui Wang
Technical Note
  • 17 Downloads

Abstract

In this study, 26 single nucleotide polymorphism (SNP) markers were developed and characterized in Nipponacmea schrenckii. The minor allele frequency raged from 0.0238 to 0.3571. The observed heterozygosity and expected heterozygosity ranged from 0.0000 to 0.2381 and from 0.0929 to 0.4866, respectively. Polymorphic information content ranged from 0.0866 to 0.3538. The inbreeding coefficient values varied from − 0.0582 to 0.9985. Four loci showed significant deviations from the Hardy–Weinberg equilibrium (P < 0.01). The polymorphic SNPs will be helpful for the further population genetic analysis and natural resource conservation of N. schrenckii.

Keywords

Nipponacmea schrenckii SNP markers Population genetic diversity 

Notes

Acknowledgements

This work was supported by National Natural Science Foundation of China (No.: 31460562), the Key Research Program of Yantai (SM17SK04, SM17SK09), and the Doctoral Science Research Foundation of Yantai University (SM15B01).

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Copyright information

© Springer Nature B.V. 2019

Authors and Affiliations

  • Jiangyong Qu
    • 1
    Email author
  • Shanshan Wang
    • 1
  • Yutong Cui
    • 1
  • Xiaoyu Guo
    • 1
  • Yunhui Wang
    • 1
  1. 1.College of Life SciencesYantai UniversityYantaiChina

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