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The complete chloroplast genome sequence of Actinidia kolomikta from north China

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Abstract

The complete chloroplast genome sequence of a wild kiwifruit species from north China, Actinidia kolomikta, was determined and mapped based on Illumina sequencing data. The complete chloroplast genome is 156,875 bp and comprises a pair of inverted repeat regions of 23,918 bp each, a large single-copy region of 88,568 bp, and a small single-copy region of 20,471 bp. The genome harbors 132 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 39 transfer RNA genes. Compared with most other angiosperms, A. kolomikta has lost its clpP gene. Phylogenetic analysis based on chloroplast genomes indicates that A. kolomikta is closely related to Actinidia argute.

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Acknowledgements

This work was financially supported by the National Basic Research Program of China (Grant No. 2013FY111700-2), the Beijing Talents Training Program (Grant No. 2014000020060G179), the Special Fund for the Construction of Scientific and Technological Innovation Capability (Grant No. KJCX20170111) and the Young Foundation of Beijing Academy of Agriculture and Forestry Sciences (Grant No. QNJJ201703). We thank Robbie Lewis, MSc, from Liwen Bianji, Edanz Group China (http://www.liwenbianji.cn/ac), for editing the English text of a draft of this manuscript.

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Authors and Affiliations

  1. Beijing Academy of Forestry and Pomology Sciences, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100093, China

    Yanping Lan, Lili Cheng, Wugang Huang, Qingchang Cao, Anjin Luo & Guanglong Hu

  2. National Chestnut Engineering Technology Research Center, Beijing, 100093, China

    Yanping Lan, Lili Cheng, Wugang Huang, Qingchang Cao & Guanglong Hu

  3. Department of Forestry, Changping County, Beijing, 102200, China

    Zhijun Zhou

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  1. Yanping Lan
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  2. Lili Cheng
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  3. Wugang Huang
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  4. Qingchang Cao
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  6. Anjin Luo
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  7. Guanglong Hu
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Correspondence to Guanglong Hu.

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Lan, Y., Cheng, L., Huang, W. et al. The complete chloroplast genome sequence of Actinidia kolomikta from north China. Conservation Genet Resour 10, 475–477 (2018). https://doi.org/10.1007/s12686-017-0852-8

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