Conservation Genetics Resources

, Volume 6, Issue 4, pp 1031–1034

Isolation and characterization of polymorphic microsatellite loci for Siphamia tubifer Weber (Perciformes: Apogonidae)

  • Tilman J. Alpermann
  • Jörg Plieske
  • Ahmad O. Mal
  • Ofer Gon
  • Michael L. Berumen
Microsatellite Letters

DOI: 10.1007/s12686-014-0278-5

Cite this article as:
Alpermann, T.J., Plieske, J., Mal, A.O. et al. Conservation Genet Resour (2014) 6: 1031. doi:10.1007/s12686-014-0278-5


The cardinalfish Siphamia tubifer has been selected as a model for the study of genetic connectivity in reef-associated fishes among marine-protected-areas in Socotra Island in the northwestern Indian Ocean (part of the Socotra Archipelago, a UNESCO World Heritage Site since 2008). Twenty-six novel microsatellite markers are described for S. tubifer and are now available for studies on its genetic population structure. In a population sample from Socotra Island, the newly developed markers possessed between three and 20 alleles. Expected and observed heterozygosity ranged from 0.56–0.96 to 0.55–0.95, respectively. The markers did not show deviations from Hardy–Weinberg equilibrium and were not in linkage disequilibrium.


Siphamia tubifer Microsatellites Population genetics Connectivity Marine protected areas 

Supplementary material

12686_2014_278_MOESM1_ESM.pdf (28 kb)
Supplementary material 1 (PDF 27 kb)

Copyright information

© Springer Science+Business Media Dordrecht 2014

Authors and Affiliations

  • Tilman J. Alpermann
    • 1
    • 2
  • Jörg Plieske
    • 3
  • Ahmad O. Mal
    • 4
  • Ofer Gon
    • 5
  • Michael L. Berumen
    • 6
  1. 1.Ichthyology SectionSenckenberg Research Institute and Natural History Museum FrankfurtFrankfurt am MainGermany
  2. 2.Biodiversity and Climate Research Centre (BiK-F)Frankfurt am MainGermany
  3. 3.TraitGeneticsStadt Seeland OT GaterslebenGermany
  4. 4.Marine Biology Department, Faculty of Marine SciencesKing Abdulaziz UniversityJeddahKingdom of Saudi Arabia
  5. 5.South African Institute for Aquatic BiodiversityGrahamstownSouth Africa
  6. 6.Red Sea Research CenterKing Abdullah University of Science and TechnologyThuwalKingdom of Saudi Arabia

Personalised recommendations