Abstract
Ten polymorphic microsatellite loci were isolated for the Awaous guamensis, an amphidromous gobiid common to the Hawai’ian islands. The loci show a moderate to high degree of allelic diversity and observed levels of heterozygosity ranged from 0.13 to 0.87. Most loci conformed to Hardy–Weinberg equilibrium (HWE) and showed little evidence of linkage disequilibrium (LD). Our results indicate that all of the markers will be useful for assessing gene flow and population structure among evolutionary lineages of A. guamensis, and many could be useful for similar studies of congeners and other species native to Hawai’i.
References
Dieringer D, Schlotterer C (2003) microsatellite analyser(MSA): a platform independent analysis tool for large microsatellite data sets. Mol Ecol Res 3:167–169
Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47–50
Flanagan NS, Blum MJ, Davison A, Alamo M, Albarran R, Faulhaber K, Peterson E, McMillan WO (2002) Characterisation of microsatellite loci in neotropical Heliconius butterflies. Mol Ecol Notes 2:398–401
Hamilton MB, Pincus EL, Di Fiore A, Fleisher RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 27:500–507
Pounds JA, Fogden MPL, Campbell JH (1999) Biological response to climate change on a tropical mountain. Nature 398:611–615
Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:248–249
Rice WR (1989) Analyzing tables of statistical tests. Evolution 43:223–225
Rozen S, Skaletsky HJ (2000) Primer3 on the www for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, NJ, pp 365–386
Waits ER, Bagley MJ, Blum MJ, McCormick FH, Lazorchak JM (2008) Source-sink dynamics sustain central stonerollers (Campostoma anomalum) in a heavily urbanized catchment. Freshw Biol 53:2061–2075
Acknowledgments
We would like to thank T. Haas and T. Raynor for help with obtaining specimens in Hawai’i. We also thank D.P. Lindstrom for collection of A. ocellaris, A. banana and A. guamensis samples from Guam.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Hogan, J.D., Blum, M.J. & Walter, R.P. Characterization of ten novel microsatellite markers in Awaous guamensis with comments on cross amplification in congeners and other amphidromous fish native to Hawai’i. Conservation Genet Resour 3, 275–277 (2011). https://doi.org/10.1007/s12686-010-9340-0
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12686-010-9340-0