Skip to main content
Log in

Characterization of ten novel microsatellite markers in Awaous guamensis with comments on cross amplification in congeners and other amphidromous fish native to Hawai’i

  • Technical Note
  • Published:
Conservation Genetics Resources Aims and scope Submit manuscript

Abstract

Ten polymorphic microsatellite loci were isolated for the Awaous guamensis, an amphidromous gobiid common to the Hawai’ian islands. The loci show a moderate to high degree of allelic diversity and observed levels of heterozygosity ranged from 0.13 to 0.87. Most loci conformed to Hardy–Weinberg equilibrium (HWE) and showed little evidence of linkage disequilibrium (LD). Our results indicate that all of the markers will be useful for assessing gene flow and population structure among evolutionary lineages of A. guamensis, and many could be useful for similar studies of congeners and other species native to Hawai’i.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  • Dieringer D, Schlotterer C (2003) microsatellite analyser(MSA): a platform independent analysis tool for large microsatellite data sets. Mol Ecol Res 3:167–169

    CAS  Google Scholar 

  • Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47–50

    CAS  PubMed  Google Scholar 

  • Flanagan NS, Blum MJ, Davison A, Alamo M, Albarran R, Faulhaber K, Peterson E, McMillan WO (2002) Characterisation of microsatellite loci in neotropical Heliconius butterflies. Mol Ecol Notes 2:398–401

    Article  CAS  Google Scholar 

  • Hamilton MB, Pincus EL, Di Fiore A, Fleisher RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 27:500–507

    CAS  PubMed  Google Scholar 

  • Pounds JA, Fogden MPL, Campbell JH (1999) Biological response to climate change on a tropical mountain. Nature 398:611–615

    Article  CAS  Google Scholar 

  • Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:248–249

    Google Scholar 

  • Rice WR (1989) Analyzing tables of statistical tests. Evolution 43:223–225

    Article  Google Scholar 

  • Rozen S, Skaletsky HJ (2000) Primer3 on the www for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, NJ, pp 365–386

    Google Scholar 

  • Waits ER, Bagley MJ, Blum MJ, McCormick FH, Lazorchak JM (2008) Source-sink dynamics sustain central stonerollers (Campostoma anomalum) in a heavily urbanized catchment. Freshw Biol 53:2061–2075

    Article  Google Scholar 

Download references

Acknowledgments

We would like to thank T. Haas and T. Raynor for help with obtaining specimens in Hawai’i. We also thank D.P. Lindstrom for collection of A. ocellaris, A. banana and A. guamensis samples from Guam.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to J. Derek Hogan.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hogan, J.D., Blum, M.J. & Walter, R.P. Characterization of ten novel microsatellite markers in Awaous guamensis with comments on cross amplification in congeners and other amphidromous fish native to Hawai’i. Conservation Genet Resour 3, 275–277 (2011). https://doi.org/10.1007/s12686-010-9340-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12686-010-9340-0

Keywords

Navigation