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First report of the development of microsatellite markers for a tropical sea cucumber (Stichopus chloronotus)

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Abstract

We isolated new 10 polymorphic microsatellites from the tropical sea cucumber Stichopus chloronotus. These loci provide one class of variable genetic marker as the number of alleles ranged from 2 to 6 and the observed and expected heterozygosity ranged from 0.083 to 1.0 and from 0.081 to 0.724, respectively. We consider that these loci are potentially useful for revealing clones (resulting from asexual repro) and then participate in detailing the genetic structure and gene flow among S. chloronotus populations.

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References

  • Conand C (1998) Holothurians. In: Carpenter KE, Niem VH (eds) The living marine resources of the Western Central Pacific. Volume 2. Cephalopods, crustaceans, holothurians and sharks. FAO, Rome, pp 1157–1190 4218

    Google Scholar 

  • Hoareau T, Conand C (2001) Sexual reproduction of Stichopus chloronotus, a fissiparous sea cucumber, on Reunion Island, Indian Ocean. SPC Beche-de mer Information Bulletin 15:4–12

    Google Scholar 

  • Lian CL, Hogetsu T (2002) Development of microsatellite markers in black locust (Robinia pseudoacacia) using dual-suppression-PCR technique. Mol Ecol Notes 2:211–213

    CAS  Google Scholar 

  • Lovatelli A (comp/ed) Conand C, Purcell S, Uthicke S, Hamel J-F, Mercier A (2004) Advances in sea cucumber aquaculture and management. FAO, Rome

  • Marshall TC, Slate J, Kruuk L, Pemberton JM (1998) Statistical confidence for likelihood-based paternity inference in natural populations. Mol Ecol 7:639–655

    Article  CAS  PubMed  Google Scholar 

  • Nagai S, Lian CL, Hamaguchi M, Matsuyama Y, Itakura S, Hogetsu T (2004) Development of microsatellite markers in the toxic dinoflagellate Alexandrium tamarense (Dinophyceae). Mol Ecol Notes 4:83–85

    Article  CAS  Google Scholar 

  • Rousset F (2008) GENEPOP’007: a complete re-implementation of the GENEPOP software for windows and Linux. Mol Ecol Resour 8:103–106

    Article  Google Scholar 

  • Samyn Y, VandenSpiegel D, Massin C (2006) Taxonomie des holothuries des Comores. Abc Taxa 1, 130 pp

  • Uthicke S (2001) Influence of asexual reproduction on the structure and dynamics of Holothuria (Halodeima) atra and Stichopus chloronotus populations of the Great Barrier Reef. Mar Freshw Resour 52:205–215

    Article  Google Scholar 

  • Uthicke S (2002) La reproduction asexuée par scission transversale chez Stichopus chloronotus. La bêche-de-mer: Bulletin de la CPS 14:25–27

    Google Scholar 

  • Uthicke S, Conand C (2005) Amplified fragment length polymorphism (AFLP) analysis indicates the importance of both asexual and sexual reproduction in the fissiparous holothurian Stichopus chloronotus (Aspidochirotida) in the Indian and Pacific Ocean. Coral Reefs 24:103–111

    Article  Google Scholar 

  • Uthicke S, Byrne M, Conand C (2010) Genetic barcoding of commercial Bêche-de-mer species (Echinodermata: Holothuroidea). Mol Ecol Resour 10:634–646

    Article  CAS  Google Scholar 

  • Yasuda N, Nagai S, Hamaguchi M, Lian CL, Nadaoka K (2006) Development of microsatellite markers for the crown-of-thorns starfish Acanthaster planci. Mol Ecol Notes 6:141–143

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This work was conducted in the framework of the SEA-WP Connectivity Project (project leader: Kazuo Nadaoka, Tokyo Institute of Technology, Japan), supported by the Global Environment Research Fund (D-0802) of the Ministry of the Environment, Japan and Grant-in-Aid for Scientific Research (A) (No. 21254002) and Grant-in-Aid-for Research Fellows (No. 2002461) of JSPS (The Japan Society for the Promotion of Science). We thank the team members from Nadaoka Laboratory (Tokyo Institute of Technology) and National Research Institute of Fisheries and Environment of Inland Sea (Fisheries Research Agency of Japan) who actively participate in the sampling and laboratory work, in particular Tsutomu Takino and Ritsuko Kubota.

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Correspondence to Coralie Taquet.

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Taquet, C., Nagai, S., Yasuda, N. et al. First report of the development of microsatellite markers for a tropical sea cucumber (Stichopus chloronotus). Conservation Genet Resour 3, 201–203 (2011). https://doi.org/10.1007/s12686-010-9322-2

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