Skip to main content

Advertisement

Log in

The bulk fluorescein diacetate assay (FDA) as a technique for evaluating biotic impacts of crude oil to coastal sediments

  • Original Article
  • Published:
Environmental Earth Sciences Aims and scope Submit manuscript

Abstract

This study adapted the bulk fluorescein diacetate (FDA) assay to evaluate the impact of crude oil on biological activity levels in marine sediments. Sediment cores from the Elkhorn Slough, California were incubated with different levels of sweet crude oil (Deepwater Horizon, Macondo Prospect) in the Moss landing Marine Laboratories aquarium facility over a 30-day period. During this period, the amount of fluorescein released, concentration of oxygen in overlying waters, and flux of oxygen into the sediments were monitored. For all treatments a strong negative correlation between added oil and FDA production was observed (p < 0.05). The concentration of oxygen in the first 2 mm of sediment cores decreased linearly with the addition of crude oil and correlated positively with fluorescein released (p < 0.05). A linear increase in sediment oxygen flux was also observed upon crude oil addition. The miniaturized bulk FDA assay could be powerful in evaluating oil spill impacts in coastal systems.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Adam G, Duncan H (2001) Development of a sensitive and rapid method for the measurement of total microbial activity using fluorescein diacetate (FDA) in a range of soils. Soil Biol Biochem 33:943–951

    Article  Google Scholar 

  • Chand S, Lusunzi L, Veal DA, Williams LR, Karuso P (1994) Rapid screening of the antimicrobial activity of extracts and natural products. J Antibiot 47:1295–1304

    Article  Google Scholar 

  • Chrzanowski TH, Crotty RD, Hubbard JG, Welch RP (1984) Applicability of the fluorescein diacetate method of detecting active bacteria in freshwater. Microb Ecol 10:179–185

    Article  Google Scholar 

  • Clarke JM, Gillings MR, Altavilla N, Beattie AJ (2001) Potential problems with fluorescein diacetate assays of cell viability when testing natural products for antimicrobial activity. J Microbiol Methods 4:261–267

    Article  Google Scholar 

  • Elarbaoui S, Richard M, Boufahja F, Mahmoudi E, Thomas-Guyon H (2015) Effect of crude oil exposure and dispersant application on meiofauna: an intertidal mesocosm experiment. Environ Sci Process Impacts 17(5):997–1004

    Article  Google Scholar 

  • GESAMP (1993) Reports and studies No. 50, IMO/FAO/UNESCO/WMO/WHO/IAEA/UN joint Group of experts on the scientific aspects of marine contamination

  • Guilbaut GG, Kramer DN (1966) Lipolysis of fluorescein and eosin esters: kinetics of hydrolysis. Anal Biochem 14:28–40

    Article  Google Scholar 

  • Gumprecht R, Gerlach H, Nehrkorn A (1995) FDA hydrolysis and resazurin reduction as a measure of microbial activity in sediments from the south-east Atlantic. Helgolander Meeresunters 49:189–199

    Article  Google Scholar 

  • Hallock P, Lidz BH, Cockey-Burkhard EM, Donnelly KB (2003) Foraminifera as bioindicators in coral reef assessment and monitoring: the foram index. Environ Monit Assess 81:221–238, 2003

    Article  Google Scholar 

  • Jochem FJ (1999) Dark survival strategies in marine phytoplankton assessed by cytometric measurement of metabolic activity with fluorescein diacetate. Mar Biol 135:721–728

    Article  Google Scholar 

  • Karadede-Akin H, Ünlü E (2007) Heavy metal concentrations in water, sediment, fish and some benthic organisms from Tigris River, Turkey. Environ Monit Assess 131:323–337

    Article  Google Scholar 

  • Koster M, Jensen P, Meyer-Reil LA (1991) Hydrolytic activities of organisms and biogenic structures in deep-sea sediments. In: Chrost RJ (ed) Microbial enzymes in aquatic environments. Springer, New York, pp 298–310

    Chapter  Google Scholar 

  • Libes S (2009) Introduction to marine biogeochemistry, 2nd edn. Academic, London, p 928

    Google Scholar 

  • Lin Q, Mendelssohn IA (2012) Impacts and recovery of the Deepwater Horizon oil spill on vegetation structure and function of coastal salt marshes in the Northern Gulf of Mexico. Environ Sci Technol 46:3737–3743

    Article  Google Scholar 

  • Maurer BN (2013) Optimization and characterization of the bulk FDA viability assay to quantify living planktonic biomass. M.S. Thesis. Moss Landing Marine Laboratories, California State University, Monterey Bay

  • OPEC (2017) Monthly oil market report 2017. http://www.opec.org/opec_web/en/publications/4054.htm. Accessed 1 May 2018

  • Rotman B, Papermaster BW (1966) Membrane properties of living mammalian cells as studied by enzymatic hydrolysis of fluorogenic esters. Proc Natl Acad Sci 55:134–141

    Article  Google Scholar 

  • Shin WS, Pardue JH, Jackson WA (2000) Oxygen demand and sulfate reduction in petroleum hydrocarbon contaminated salt marsh soils. Water Res 34(4):1345–1353

    Article  Google Scholar 

  • Stauffert M, Cravo-Laureau C, Jézéquel R, Barantal S, Cuny P, Gilbert F, Cagnon C, Militon C, Amouroux D, Mahdaoui F, Bouyssiere B, Stora G, Merlin FX, Duran R (2013) Impact of oil on bacterial community structure in bioturbated sediments. PLoS One 8(6):e65347. https://doi.org/10.1371/journal.pone.0065347

    Article  Google Scholar 

  • Talent LG (1985) The occurrence, seasonal distribution, and reproductive condition of elasmobranch fishes in elkhorn slough, california. Calif Fish Game 71:210–219

    Google Scholar 

  • Wanandy S, Brouwer N, Liu Q, Mahon A, Cork S, Karuso P, Vemulpad S, Jamie J (2005) Optimization of the fluorescein diacetate antibacterial assay. J Microbiol Methods 60(1):21–30

    Article  Google Scholar 

  • Ward BB (2005) Temporal variability in nitrification rates and related biogeochemical factors in Monterey Bay, California, USA. Mar Ecol Prog Ser 292:97–109

    Article  Google Scholar 

  • Welschmeyer N, Maurer B (2012) A portable, sensitive plankton viability assay for IMO shipboard ballast water compliance testing. In: Olgun A, Karokoc FT, Haag F (eds) Proceeding of the global R and D forum on compliance monitoring and enforcement: ballast water management systems, pp 128–140

Download references

Acknowledgements

The primary author (EM) would like to thank the International Students Exchange Program (ISEP), California State University-Council on Ocean Affairs Science and Technology (COAST Award) and San Jose State University (H. Thomas Harvey Fellowship) for providing financial support for this work. Special thanks go to Julie Kuo of Moss Landing Marine Laboratories, CA for her technical support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Edem Mahu.

Additional information

Publisher’s Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Mahu, E., Moore-Hanaway, J., Maurer, B. et al. The bulk fluorescein diacetate assay (FDA) as a technique for evaluating biotic impacts of crude oil to coastal sediments. Environ Earth Sci 77, 751 (2018). https://doi.org/10.1007/s12665-018-7945-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s12665-018-7945-x

Keywords

Navigation