Skip to main content
Log in

Halomonas alkalitolerans sp. nov., a novel moderately halophilic bacteriun isolated from soda meadow saline soil in Daqing, China

  • Articles
  • Published:
The Journal of Microbiology Aims and scope Submit manuscript

Abstract

A moderately halophilic bacterial strain 15-13T, which was isolated from soda meadow saline soil in Daqing City, Heilongjiang Province, China, was subjected to a polyphasic taxonomic study. The cells of strain 15–13 were found to be Gram-negative, rod-shaped, and motile. The required growth conditions for strain 15–13T were: 1–23% NaCl (optimum, 7%), 10–50°C (optimum, 35°C), and pH 7.0–11.0 (optimum, pH 9.5). The predominant cellular fatty acids were C18:1 ω7c (60.48%) and C16:0 (13.96%). The DNA G+C content was 67.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequence comparisons indicated that strain 15–13T clustered within a branch comprising species of the genus Halomonas. The closest phylogenetic neighbor of strain 15–13T was Halomonas pantelleriensis DSM 9661T (98.9% 16S rRNA gene sequence similarity). The level of DNA-DNA relatedness between the novel isolated strain and H pantelleriensis DSM 9661T was 33.8%. On the basis of the phenotypic and phylogenetic data, strain 15–13T represents a novel species of the genus Halomonas, for which the name Halomonas alkalitolerans sp. nov. is proposed. The type strain for this novel species is 15–13T (=CGMCC 1.9129T =NBRC 106539T).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Arahal, D.R., R.H. Vreeland, C.D. Litchfield, M.R. Mormile, B.J. Tindall, A. Oren, V. Bejar, E. Quesada, and A. Ventosa. 2007. Recommended minimal standards for describing new taxa of the family Halomonadaceae. Int. J. Syst. Evol. Microbiol. 57, 2436–2446.

    Article  PubMed  CAS  Google Scholar 

  • Berendes, F., G. Gottcswhalk, E. Heine-Dobbernack, E.R.B. Moore, and B.J. Tindall. 1996. Halomonas desiderata sp. nov., a new alkaliphilic, halotolerant and denitrifying bacterium isolated from a municipal sewage works. Syst. Appl. Microbiol. 19, 158–167.

    CAS  Google Scholar 

  • Boltyanskaya, Y.V., V.V. Kevbrin, A.M. Lysenko, T.V. Kolganova, T.P. Tourova, G.A. Osipov, and T.N. Zhilina. 2007. Halomonas mongoliensis sp. nov. and Halomonas kenyensis sp. nov., new hal oalkaliphilic denitrifiers capable of N2O reduction, isolated from soda lakes. Microbiology (English translation of Mikrobiologiia). 76, 739–747.

    CAS  Google Scholar 

  • De Ley, J., H. Cattoir, and A. Reynaerts. 1970. The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem. 12, 143–153.

    Article  PubMed  Google Scholar 

  • Duckworth, A.M., W.D. Grant, B.E. Jones, D. Meijer, M.C. Màrques, and A. Ventosa. 2000. Halomonas magadii sp. nov., a new member of the genus Halomonas, isolated from a soda lake of the East African Rift Valley. Extremophiles 4, 53–60.

    PubMed  CAS  Google Scholar 

  • Dussault, H.P. 1955. An improved technique for staining red halophilic bacteria. J. Bacteriol. 70, 484–485.

    PubMed  CAS  Google Scholar 

  • Felsenstein, J. 2004. PHYLIP-Phylogeny Inference Package documentation files, version 3.62c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, Washington, USA.

    Google Scholar 

  • Heyrman, J., A. Balcaen, P. De Vos, and J. Swings. 2002. Halomonas muralis sp. nov., isolated from microbial biofilms colonizing the walls and murals of the Saint-Catherine chapel (Castle Herberstein, Austria). Int. J. Syst. Evol. Microbiol. 52, 2049–2054.

    Article  PubMed  CAS  Google Scholar 

  • Huß, V.A.R., H. Festl, and K.H. Schleifer. 1983. Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst. Appl. Microbiol. 4, 184–192.

    Google Scholar 

  • Kaye, J.Z., C. Màrquez, A. Ventosa, and J.A. Baross. 2004. Halomonas neptunia sp. nov., Halomonas sulfidaeris sp. nov., Halomonas axialensis sp. nov., and Halomonas hydrothermalis sp. nov.: halophilic bacteria isolated from widely distributed deep-sea hydrothermalvent environments. Int. J. Syst. Evol. Microbiol. 54, 499–511.

    Article  PubMed  CAS  Google Scholar 

  • Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5, 150–163.

    Article  PubMed  CAS  Google Scholar 

  • Marmur, J. 1961. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3, 208–218.

    Article  CAS  Google Scholar 

  • Marmur, J. and P. Doty. 1962. Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. Mol. Biol. 5, 109–118.

    Article  PubMed  CAS  Google Scholar 

  • Mata, J.A., J. Martinez-Cánovas, E. Quesada, and V. Béjar. 2002. A detailed phenotypic characterization of the type strains of Halomonas species. Syst. Appl. Microbiol. 25, 360–375.

    Article  PubMed  CAS  Google Scholar 

  • Mormile, M.R., M.F. Romine, M.T. Garcìa, A. Ventosa, T.J. Bailey, and B.M. Peyton. 1999. Halomonas campisalis sp. nov., a denitrifying, moderately haloalkaliphilic bacterium. Syst. Appl. Microbiol. 22, 551–558.

    PubMed  CAS  Google Scholar 

  • Quillaguamán, J., R. Hatti-Kaul, B. Mattiason, M.T. Alvarez, and O. Delgado. 2004. Halomonas boliviensis sp. nov., an alkalitolerant, moderate halophile isolated from soil around a Bolivian hypersaline lake. Int. J. Syst. Evol. Microbiol. 54, 721–725.

    Article  PubMed  Google Scholar 

  • Reysenbach, A.L., K. Longnecker, and J. Kirshtein. 2000. Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a mid-Atlantic ridge hydrothermal vent. Appl. Environ. Microbiol. 66, 3798–3806.

    Article  PubMed  CAS  Google Scholar 

  • Romano, I., A. Giordano, L. Lama, B. Nicolaus, and A. Gambacorta. 2005. Halomonas campaniensis sp. nov., a haloalkaliphilic bacterium isolated from a mineral pool of Campania region, Italy. Syst. Appl. Microbiol. 28, 610–618.

    Article  PubMed  CAS  Google Scholar 

  • Romano, I., L. Lama, B. Nicolaus, A. Poli, A. Gambacorta, and A. Giordano. 2006. Halomonas alkaliphila sp. nov., a novel halotolerant alkaliphilic bacterium isolated from a salt pool in Campania (Italy). J. Gen. Appl. Microbiol. 52, 339–348.

    Article  PubMed  CAS  Google Scholar 

  • Romano, I., B. Nicolaus, L. Lama, M.C. Manca, and A. Gambacorta. 1996. Characterization of a haloalkaliphilic strictly aerobic bacterium, isolated from Pantelleria Island. Syst. Appl. Microbiol. 19, 326–333.

    Google Scholar 

  • Sehgal, S.N. and N.E. Gibbons. 1960. Effect of some metal ions on the growth of Halobacterium cutirubrum. Can. J. Microbiol. 6, 165–169.

    Article  PubMed  CAS  Google Scholar 

  • Ventosa, A., E. Quesada, F. Rodriguez-Valera, F. Ruiz-Berraquero, and A. Ramos-Cormenzana. 1982. Numerical taxonomy of moderately halophilic Gram-negative rods. J. Gen. Microbiol. 128, 1959–1968.

    Google Scholar 

  • Vreeland, R.H. 2005. Genus I. Halomonas. Bergey’s Manual of Systematic Bacteriology, 2nd (ed.), vol. 2, pp. 300–313. In D.J. Brenner, N.R. Krieg, J.T. Staley and G.M. Garrity (eds.). Springer, New York, N.Y., USA.

    Google Scholar 

  • Vreeland, R.H., C.D. Litchfield, E.L. Martin, and E. Elliot. 1980. Halomonas elongata, a new genus and species of extremely salt tolerant bacteria. Int. J. Syst. Bacteriol. 30, 485–495.

    Article  CAS  Google Scholar 

  • Wang, Y.N., H. Cai, S.L. Yu, Z.Y. Wang, and X.L. Wu. 2007. Halomonas gudaonensis sp. nov., isolated from a saline soil contaminated by crude oil. Int. J. Syst. Evol. Microbiol. 57, 911–915.

    Article  PubMed  CAS  Google Scholar 

  • Wang, S., Q. Yang, Z.H. Liu, L. Sun, D. Wei, J.J. Zhang, J.Z. Song, and H.F. Yuan. 2010. Haloterrigena daqingensis sp. nov., an extremely haloalkaliphilic archaeon isolated from salt-alkaline soils in Daqing, China. Int. J. Syst. Evol. Microbiol. 60, 2267–2271.

    Article  PubMed  CAS  Google Scholar 

  • Wayne, L.G., D.J. Brenner, R.R. Colwell, P.A.D. Grimont, O. Kandler, M.I. Krichevsky, L.H. Moore, and et al. 1987. International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37, 463–464.

    Article  Google Scholar 

  • Wu, G., X.Q. Wu, Y.N. Wang, C.Q. Chi, Y.Q. Tang, K. Kida, X.L. Wu, and Z.K. Luan. 2008. Halomonas daqingensis sp. nov., a moderately halophilic bacterium isolated from an oilfield soil. Int. J. Syst. Evol. Microbiol. 58, 2859–2865.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Qian Yang.

Additional information

Supplemental material for this article may be found at http://www.springer.com/content/120956

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, S., Yang, Q., Liu, ZH. et al. Halomonas alkalitolerans sp. nov., a novel moderately halophilic bacteriun isolated from soda meadow saline soil in Daqing, China. J Microbiol. 49, 24–28 (2011). https://doi.org/10.1007/s12275-011-0197-z

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12275-011-0197-z

Keywords

Navigation