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1H, 13C and 15N resonance assignments of the C-terminal DNA-binding domain of RstA protein from Klebsiella pneumoniae

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Abstract

Bacterial cells often use two-component signal transduction systems to regulate genes in response to environmental stimuli. The RstA/RstB system is a two-component regulatory system consisting of the membrane sensor, RstB, and its cognate response regulator RstA. The RstA of Klebsiella pneumoniae consists of a N-terminal receiver domain (NRD, residues 1-119) and a C-terminal DNA-binding domain (DBD, residues 130-236). Phosphorylation of the response regulator induces a conformational change in the regulatory domain of RstA, which results in activation of the effector domain to regulate the downstream genes, including the ferrous iron transport system (Feo), at low-pH condition. Here we report the 1H, 13C and 15N resonance assignments and secondary structure identification of the DBD of RstA from K. pneumoniae as a first step for unraveling the structural and functional relationship of the RstA/RstB two component system.

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References

  • Cabeza ML, Aguirre A, Soncini FC, Vescovi EG (2007) Induction of RpoS degradation by the two-component system regulator RstA in Salmonella enterica. J Bacteriol 189:7335–7342

    Article  Google Scholar 

  • del Castillo-Rueda A, Khosravi-Shahi P (2010) The role of iron in the interaction between host and pathogen. Med Clin (Barc) 134:452–456

    Article  Google Scholar 

  • Jeon J, Kim H, Yun J, Ryu S, Groisman EA, Shin D (2008) RstA-promoted expression of the ferrous iron transporter FeoB under iron-replete conditions enhances fur activity in Salmonella enterica. J Bacteriol 190:7326–7334

    Article  Google Scholar 

  • Mao X-M, Zhou Z, Cheng L-Y, Hou X-P, Guan W-J, Li Y-Q (2009) Involvement of SigT and RstA in the differentiation of Streptomyces coelicolor. FEBS Lett 583:3145–3150

    Article  Google Scholar 

  • Markley JL, Bax A, Arata Y, Hilbers CW, Kaptein R, Sykes BD, Wright PE, Wuthrich K (1998) Recommendations for the presentation of NMR structures of proteins and nucleic acids. IUPAC-IUBMB-IUPAB Inter-Union Task Group on the standardization of data bases of protein and nucleic acid structures determined by NMR spectroscopy. J Biomol NMR 12:1–23

    Article  Google Scholar 

  • Martinez-Hackert E, Stock AM (1997) The DNA-binding domain of OmpR: crystal structures of a winged helix transcription factor. Structure 5:109–124

    Article  Google Scholar 

  • Mizuno T, Tanaka I (1997) Structure of the DNA-binding domain of the OmpR family of response regulators. Mol Microbiol 24:665–667

    Article  Google Scholar 

  • Nam D, Choi E, Kweon D-H, Shin D (2010) The RstB sensor acts on the PhoQ sensor to control expression of PhoP-regulated genes. Mol Cells 30:363–368

    Article  Google Scholar 

  • Ogasawara H, Hasegawa A, Kanda E, Miki T, Yamamoto K, Ishihama A (2007) Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade. J Bacteriol 189:4791–4799

    Article  Google Scholar 

  • Rhee JE, Sheng W, Morgan LK, Nolet R, Liao X, Kenney LJ (2008) Amino acids important for DNA recognition by the response regulator OmpR. J Biol Chem 283:8664–8677

    Article  Google Scholar 

  • Whitworth DE, Cock PJA (2009) Evolution of prokaryotic two-component systems: insights from comparative genomics. Amino Acids 37:459–466

    Article  Google Scholar 

  • Wishart DS, Sykes BD (1994) Chemical shifts as a tool for structural determination. Methods Enzymol 239:363–392

    Article  Google Scholar 

  • Yamamoto K (2004) Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli. J Biol Chem 280:1448–1456

    Article  Google Scholar 

Download references

Acknowledgments

The NMR spectra were obtained at High-Field Nuclear Magnetic Resonance Center (HF-NMRC) supported by the National Research Program for Genomic Medicine. This work was supported by a grant from the National Science Council of the Republic of China (NSC 100-2311-B-001-023).

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Correspondence to Tai-huang Huang.

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Chen, SC., Chang, CF., Fan, PJ. et al. 1H, 13C and 15N resonance assignments of the C-terminal DNA-binding domain of RstA protein from Klebsiella pneumoniae . Biomol NMR Assign 7, 85–88 (2013). https://doi.org/10.1007/s12104-012-9383-0

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  • DOI: https://doi.org/10.1007/s12104-012-9383-0

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