Skip to main content

Advertisement

Log in

Diagnosis of typhoid fever by polymerase chain reaction

  • Original Article
  • Published:
The Indian Journal of Pediatrics Aims and scope Submit manuscript

Abstract

Objective

To determine the efficacy of nested polymerase chain reaction (PCR) in detecting Salmonella typhi gene sequences in blood and urine specimens and to determine the cut-off titer of Widal test using PCR as gold standard test for diagnosis of typhoid fever.

Methods

Study included 71 children between the ages of 8 months and 14 years; 52 of them were suspected cases of typhoid fever, 11 were febrile non-typhoid controls, and 8 were apparently healthy children. Nested PCR in Blood and Urine, Blood culture, Widal test and Urine culture were done and their results analyzed.

Results

Among suspected typhoid cases, PCR in blood and urine had positivity of 82.7% each. Blood culture, Widal test (at cut off titer TO and / or TH ≥ 1:160) and urine culture had positivity of 26.9%, 50% and 3.8% respectively. In one case, urine PCR was positive and blood PCR was negative. Similarly, in another case, PCR in blood was positive however urine tested negative. Considering PCR as gold standard, the antibody cut off titer was evaluated. A cut-off titer of TO ≥ 1:80 and/or TH ≥ 1:160 had sensitivity and specificity of 72.7% and 84.2%, while the respective figures were 50% and 89.5% when the cut-off titer was TO and/or TH ≥ 1:160.

Conclusion

The sensitivity, specificity, positive and negative predictive values, likelihood ratios were same for PCR based detection of S. typhi in blood and urine samples. Nested PCR had higher efficacy in detecting typhoid fever than Widal test, blood and urine cultures. A cut off titer of TO ≥ 1:80 and/or TH ≥ 1:160 was found to have better diagnostic value in this region.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Ivanoff B, Levine MM, Lambert PH. Vaccination against typhoid fever, Present status. Bull WHO 1994; 72: 957–971.

    PubMed  CAS  Google Scholar 

  2. Hoffman SL, Edman DC, Punjabi NH et al. Bone marrow aspirate culture superior to streptokinase clot culture and 8 ml 1:10 blood to broth ratio culture for diagnosis of typhoid fever. Am J Trop Med Hyg 1986; 35: 836–839.

    PubMed  CAS  Google Scholar 

  3. Forsyth JRL. Typhoid and Paratyphoid. In Forsyth JRL, ed. Topley and Wilson’s Microbiology and Microbial Infections. Vol. 3., London; Arnold, 1998; 459–478.

    Google Scholar 

  4. Rubin FA, McWhirter PD, Punjabi NH et al. Use of a DNA probe to detect Salmonella Typhi in the blood of patients with typhoid fever. J Clin Microbiol 1989; 27: 1112–1114.

    PubMed  CAS  Google Scholar 

  5. Song JH, Cho H, Pank MY, Na DS, Moon HB, Pai CH. Detection of S. typhi in the blood of patients with typhoid fever by PCR. J Clin Microbiol 1993; 31: 1439–1443.

    PubMed  CAS  Google Scholar 

  6. Frankel G. Detection of Salmonella Typhi by PCR. J Clin Microbiol 1994; 32: 1415.

    PubMed  CAS  Google Scholar 

  7. Hashimoto Y, Itho Y, Fujinaga Y et al. Development of Nested PCR based on ViaB sequence to detect S. typhi. J Clin Microbiol 1995; 33: 775–777.

    PubMed  CAS  Google Scholar 

  8. Old DC, Threlafall EJ. Salmonella. In Forsyth JRL, ed. Topley and Wilson’s Microbiology and Microbial Infections. Vol. 2., London; Arnold, 1998; 970–997.

    Google Scholar 

  9. Prakash P, Mishra OP, Singh AK, Gulati AK, G Nath. Evaluation of nested PCR in diagnosis of typhoid fever. J Clin Microbiol 2005; 43: 431–432.

    Article  PubMed  CAS  Google Scholar 

  10. Greenberg RS, Daniels RS, Flanders WD, Eley JW, Boring JR. Diagnostic testing. In Medical Epidemiology. New York; McGraw-Hill; 1996; 77–88.

    Google Scholar 

  11. Gillman RH, Terminel M, Levine MM, Hernandez-Mendoza P, Hornick RB. Relative efficacy of blood, urine, rectal swab, bone marrow and rose spot cultures for recovery of Salmonella Typhi in typhoid fever. Lancet 1975; 11: 1211–1213.

    Article  Google Scholar 

  12. Chaudhary R, Laxmi BV, Nisar N, Ray K, Kumar D. Standardization of PCR for the detection of S. Typhi in typhoid fever. J Clin Pathol 1997; 50: 437–439.

    Article  Google Scholar 

  13. Haque A, Ahmed J, Quereshi J. Early detection of Typhoid by Polymerase Chain Reaction. Ann Saudi Med 1999; 19: 337–340.

    PubMed  CAS  Google Scholar 

  14. Massi MN, Shirakawa T, Totoh A, Bishnu A, Hatta M, Kawabata M. Rapid diagnosis of typhoid fever by PCR assay using one pair of primers from flagellin gene of Salmonella Typhi. J Infect Chemother 2003; 9: 233–237.

    Article  PubMed  CAS  Google Scholar 

  15. Bal AE, Gravekamp C, Hartskeerl RA et al. Diagnosis of leptospires in urine by PCR for early diagnosis of leptospirosis. J Clin Microbiol 1994; 32: 1894–1898.

    PubMed  CAS  Google Scholar 

  16. Fuentes I, Rodriguez M, Domingo CJ, Castillo FD, Juncosa T, Alwar J. Urine sample used for congenital toxoplasmosis diagnosis by PCR. J Clin Microbiol 1996; 34: 2368–2371.

    PubMed  CAS  Google Scholar 

  17. Whiley DM, Lecornec GM, Mackay IM, Siebert DJ, Sloots TP. Real-time PCR assay for the detection of Neisseria gonorrhoeae by Light cycler. Diag Microbiol Infect Dis 2002; 42: 85–89.

    Article  CAS  Google Scholar 

  18. Rasaily R, Dutta P, Saha MR et al. Value of single Widal test in the diagnosis of typhoid fever. J Clin Microbiol 1993; 97: 104–107.

    CAS  Google Scholar 

  19. Shukla S, Patel B, Chitnis DS. Hundred years Widal test and its reappraisal in the endemic areas. Ind J Med Res 1997; 105: 53–57.

    CAS  Google Scholar 

  20. Olapoenia LA, King AL. Widal agglutination test-100 years later: still plagued by controversy. Prostgrad Med J 2000; 76: 80–84.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to S. R. Ambati.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ambati, S.R., Nath, G. & Das, B.K. Diagnosis of typhoid fever by polymerase chain reaction. Indian J Pediatr 74, 909–913 (2007). https://doi.org/10.1007/s12098-007-0167-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12098-007-0167-y

Key words

Navigation