Skip to main content

Advertisement

Log in

Characterization of Vibrio species isolated from freshwater fishes by ribotyping

  • Short Communication
  • Published:
Indian Journal of Microbiology Aims and scope Submit manuscript

Abstract

Three Vibrio species from the resident microflora of gastrointestinal tract of freshwater carps and prawns were isolated and confirmed biochemically as V. fluvialis from Cyprinus carpio/Labeo rohita; V. parahaemolyticus from Macrobrachium rosenbergii and V. harveyi from Macrobrachium malcomsoni. The genetic relationship among these Vibrio species was carried out by polymerase chain reaction (PCR) amplification of 16S rRNA gene followed by restriction digestion with Hae III, Bam HI and Pst I. Dendogram based on ribotyping showed the isolated Vibrios were differentiated into three clusters. V. harveyi was closely related to V. vulnificus (reference Microbial type Culture Collection (MTCC) strain) and distantly related to V. parahaemolyticus as well as V. fluvialis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  1. Thompson FL, Iida T and Swings J (2004) Biodiversity of Vibrios. Microbiol Mol Biol Rev 68(3):403–431

    Article  CAS  PubMed  Google Scholar 

  2. Montes M, Farto R, Perez MJ, Nieto TP, Larsen JL and Christensen H (2003) Characterization of Vibrio strains isolated from turbot (Scophthalmus maximus) culture by phenotypic analysis, ribotyping and 16S rRNA gene sequence comparison. J Appl Microbiol 95:693–703

    Article  CAS  PubMed  Google Scholar 

  3. Collins CH, Lyne PM and Grange JM (2001) Microbiological Methods. 7th edition, Arnold, London, pp 102–120

    Google Scholar 

  4. Williams JGK, Kubelik AR, Livak KJ, Rajalski AJ and Tingey VS (1990) DNA polymorphism amplified primers are useful as genetic markers. Nucleic Acid Res 18:6531–6535

    Article  CAS  PubMed  Google Scholar 

  5. Van de PY and De Wachter R (1994) TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows Environment. Comp Appl Biosci 10:569–570

    Google Scholar 

  6. Nei M and Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269–5273

    Article  CAS  PubMed  Google Scholar 

  7. Sokal RR and Michener CD (1958) A statistical method for systematic relationships. Univ Kans Sci Bull 38:1409–1438

    Google Scholar 

  8. Felenstein J (1985) Confidence limits on phylogenics: an approach using bootstrap. Evolution 39:783–791

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. Samanta.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Mishra, P., Samanta, M., Mohanty, S. et al. Characterization of Vibrio species isolated from freshwater fishes by ribotyping. Indian J Microbiol 50, 101–103 (2010). https://doi.org/10.1007/s12088-010-0010-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12088-010-0010-4

Keywords

Navigation