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Do identical polar diatomic molecules form stacked or linear dimers?

Hydrogen bonding is not just dipole-dipole interactions

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Abstract

The interaction of two identical polar neutral molecules is modeled by two equal but oppositely charged point particles at a fixed distance of separation. The total Coulomb potential energy of this system is calculated as a function of this distance, x, and the distance, y, between their centers of mass. We find that when the y/x ratio is less than about 3.1619, the linear configuration has the lower energy, whereas when this ratio exceeds 3.1619, a stacked structure is more stable. Interestingly, when two real polar molecules, such as HF interact, neither of these structures are formed. It is ‘hydrogen bonded’. The NaF dimer on the other hand, has a global minimum as stacked structure at a y/x ratio of about 1, significantly smaller than 3.1619!

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Suggested Reading

  1. L Pauling, The Nature of Chemical Bond, 3rd Edition, Cornell University Press, 1960.

    Google Scholar 

  2. E Arunan, Resonance, Vol.14, No.4, p.346, 2009.

    Article  Google Scholar 

  3. E Arunan, Resonance, Vol.14, No.12, p.1210, 2009.

    Article  Google Scholar 

  4. E Arunan, Resonance, Vol.15, No.7, p.667, 2010.

    Article  Google Scholar 

  5. E Arunan, G R Desiraju, R A Klein, J Sadlej, S Scheiner, I Alkorta, D C Clary, R H Crabtree, J J Dannenberg, P Hobza, H G Kjaergaard, A C. Legon, B Mennucci and D J Nesbitt, Pure Appl. Chem., Vol.83, p.1619, 2011.

    Google Scholar 

  6. E Arunan, G R Desiraju, R A Klein, J Sadlej, S Scheiner, I Alkorta, D C Clary, R H Crabtree, J J Dannenberg, P Hobza, H G Kjaergaard, A C Legon, B Mennucci and D J Nesbitt, Pure Appl. Chem., Vol.83, p.1637, 2011.

    Google Scholar 

  7. G R Desiraju, P S Ho, L Kloo, A C Legon, R Marquardt, P Metrongolo, P Politzer, G Resnati and K Rissanen, Pure Appl. Chem., Vol.85, p.1711, 2013.

    Article  Google Scholar 

  8. P Politzer, K E Riley, F A Bulat and J S Murray, Comput. Theo. Chem., Vol.998, No.2, 2012.

    Google Scholar 

  9. D Mani and E Arunan, Phys. Chem. Chem. Phys., Vol.15, p.14377, 2013.

    Article  Google Scholar 

  10. S P Thomas, M S Pavan and T N Guru Row, ChemComm., Vol.50, No.49, 2014.

    Google Scholar 

  11. D J Griffiths, Introduction to Electrodynamics, 4th Ed., Pearson Education Inc., p.93, 2013.

    Google Scholar 

  12. R Parajuli and E Arunan, Chem. Phys. Lett., Vol. 63, pp.568–569, 2013.

    Google Scholar 

  13. F London, Trans. Faraday Soc., Vol.33, No.8, 1937.

    Google Scholar 

  14. A D Buckingham and P W Fowler, Can J. Chem., Vol.63, p.2018, 1985.

    Article  Google Scholar 

  15. A D Buckingham, J E Del Bene and S A C McDowell, Chem. Phys. Lett., Vol.463, No.1 2008.

    Google Scholar 

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Correspondence to E. Arunan.

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Cedric W Williams is an undergraduate student at Louisiana State University pursuing degrees in Physics and Mathematics.

Richard N Zare is the Marguerite Blake Wilbur Professor of Natural Science in the Chemistry Department with a courtesy appointment in the Physics Department, Stanford University.

E Arunan is a Professor at the Inorganic and Physical Chemistry Department at the Indian Institute of Science, Bangalore.

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Williams, C.W., Zare, R.N. & Arunan, E. Do identical polar diatomic molecules form stacked or linear dimers?. Reson 19, 704–712 (2014). https://doi.org/10.1007/s12045-014-0078-y

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  • DOI: https://doi.org/10.1007/s12045-014-0078-y

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