In this study, characterization of DTHS3 satellite DNA (satDNA) was further expanded within the class Bivalvia. Monomer variants of DTHS3 satDNA were compared in 12 bivalve species belonging to two different subclasses, Heterodonta and Pteriomorphia. This satDNA, whose age is estimated to a minimum of 516 Ma, is contributing to the concept of the dual character of satDNA sequences: their sequence preservation throughout long evolutionary periods and generation of species-specific variants of the same satDNA family.
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Bieler R., Mikkelsen P. M., Collins T., Glover E. A., González V. L., Graf D. L. et al. 2014 Investigating the bivalve tree of life–an exemplar-based approach combining molecular and novel morphological characters. Invertebr. Syst. 28, 32–115.
Biscotti M. A., Canapa A., Olmo E., Barucca M., Teo C. H., Schwarzacher T. et al. 2007 Repetitive DNA, molecular cytogenetics and genome organization in the King scallop (Pecten maximus). Gene 406, 91–98.
Gaffney P. M., Pierce J. C., Mackinley A. G., Titchen D. A. and Glenn W. K. 2003 Pearl, a novel family of putative transposable elements in bivalve mollusks. J. Mol. Evol. 56, 308–316.
Luchetti A., Šatović E., Mantovani B. and Plohl M. 2016 RUDI, a short interspersed element of the V-SINE superfamily widespread in molluscan genomes. Mol. Genet. Genomics 291, 1419–1429.
Meštrović N., Castagnone-Sereno P. and Plohl M. 2006 Interplay of selective pressure and stochastic events directs evolution of the MEL172 satellite DNA library in root-knot nematodes. Mol. Biol. Evol. 23, 2316–2325.
Miklos G. L. G. 1985 Localized highly repetitive DNA sequences in vertebrate and invertebrate genomes. In Molecular evolutionary genetics. (ed. R. J. Maclntyre), pp. 241–321. Plenum Press, New York.
Murgarella M., Puiu D., Novoa B., Figueras A., Posada D. and Canchaya C. 2016 A first insight into the genome of the filter- feeder mussel Mytilus galloprovincialis. PLoS One 11, 1–22.
Passamonti M., Mantovani B. and Scali V. 1998 Characterization of a highly repeated DNA family in tapetinae species (mollusca bivalvia: veneridae). Zoolog. Sci. 15, 599–605.
Petrović V., Pérez-García C., Pasantes J. J., Šatović E., Prats E. and Plohl M. 2009 A GC-rich satellite DNA and karyology of the bivalve mollusk Donax trunculus: a dominance of GC-rich heterochromatin. Cytogenet. Genome Res. 124, 63–71.
Petrović V. and Plohl M. 2005 Sequence divergence and conservation in organizationally distinct subfamilies of Donax trunculus satellite DNA. Gene 362, 37–43.
Plohl M. and Cornudella L. 1996 Characterization of a complex satellite DNA in the mollusc Donax trunculus: analysis of sequence variations and divergence. Gene 169, 157–164.
Plohl M. and Cornudella L. 1997 Characterization of interrelated sequence motifs in four satellite DNAs and their distribution in the genome of the mollusc Donax trunculus. J. Mol. Evol. 44, 189–198.
Plohl M., Petrović V., Luchetti A., Ricci A., Šatović E., Passamonti M. and Mantovani B. 2010 Long-term conservation vs high sequence divergence: the case of an extraordinarily old satellite DNA in bivalve mollusks. Heredity 104, 543–551.
Salser W., Bowen S., Browne D., el-Adli F., Fedoroff N., Fry K. et al. 1976 Investigation of the organization of mammalian chromosomes at the DNA sequence level. Fed. Proc. 35, 23–35.
Šatović E. and Plohl M. 2013 Tandem repeat-containing MITE elements in the clam Donax trunculus. Genome Biol. Evol. 5, 2549–2559.
Šatović E., Vojvoda Zeljko T., Luchetti A., Mantovani B. and Plohl M. 2016 Adjacent sequences disclose potential for intra-genomic dispersal of satellite DNA repeats and suggest a complex network with transposable elements. BMC Genomics 17, 997.
Takeuchi T., Kawashima T., Koyanagi R., Gyoja F., Tanaka M., Ikuta T. et al. 2012 Draft genome of the pearl oyster Pinctada fucata: a platform for understanding bivalve biology. DNA Res. 19, 117–130.
Tamura K., Peterson D., Peterson N., Stecher G., Nei M. and Kumar S. 2011 MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731–2739.
Thomas J. and Pritham E. J. 2015 Helitrons, the eukaryotic rolling-circle transposable elements. Microbiol. Spectr. 3, 1–32.
Zhang G., Fang X., Guo X., Li L., Luo R., Xu. F. et al. 2012 The oyster genome reveals stress adaptation and complexity of shell formation. Nature 490, 49–54.
Funding was provided by Ministry of Science, Education and Sports (grant no. 098-0982913-2756).
Corresponding editor: Silvia Garagna
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Šatović, E., Plohl, M. Distribution of DTHS3 satellite DNA across 12 bivalve species. J Genet 97, 575–580 (2018). https://doi.org/10.1007/s12041-018-0940-x
- satellite DNA