Cell Culture
Mouse NSC line C17.2 [33] was cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Invitrogen) containing 2 mM l-glutamine (Invitrogen), 10 % fetal bovine serum (FBS) (Sijiqing Biotech, China), 5 % horse serum (Gibco), 100 units/mL of penicillin, and 100 μg/mL of streptomycin. The cultures were maintained in a standard humidified incubator in 5 % CO2 at 37 °C, with fresh medium replaced every 2 days, and split 1:4 when the cells reached 90 % confluence.
Primary neural stem cells were isolated from newborn SD rat cerebral cortex and cultured in uncoated 25-mL flasks in DMEM/F-12 medium (Invitrogen) containing N2 and B27 supplements (Invitrogen) plus basic fibroblast growth factor (Promega, 20 ng/mL) and epidermal growth factor (Promega, 20 ng/mL). After 5–7 days culture in vitro (DIV), the primary neurospheres were collected and dissociated with 0.05 % trypsin plus 200 mM EDTA for 10 min at 37 °C and mechanically triturated with fire-polished glass pipettes. The single cells were resuspended at a density of 50,000 cells per mL of serum-free medium and cultured for 3–5 days. The number and diameters of neurospheres were assessed as described [34].
Hypoxia Exposure
Hypoxia environment was made by placing cells in a humidified microaerophilic incubation system (DWS HypOxystation) with a calibrated gas containing 1 % O2 or 3 % O2 at 37 °C (CO2 was adjusted at 5 % in both conditions). The cells were left in the incubator at 37 °C for different durations. The control cultures were incubated in normoxic conditions all the time for the same durations.
MTT Assay
C17.2 NSCs were plated in 96-well plates at 5000 cells per well in growth media cultured in DWS HypOxystation incubator perfused with a calibrated gas mixture of 1 % O2 or 3 % O2 with 5 % CO2 at 37 °C or in a normal incubator with 21 % O2 and 5 % CO2 at 37 °C for 0, 12, 24, 36, and 48 h, respectively. Twenty microliters of MTT stock solution (5 mg/mL) was added to the medium for 4 h at 37 °C. Then the supernatant was removed and replaced with 150 μL of dimethyl sulfoxide (DMSO) for 10 min at 37 °C until crystals were dissolved. The plates were shaken vigorously for 10 min to ensure complete dissolvent. MTT quantification was measured at 490 nm with a microplate reader.
EdU Incorporation Assay
The EdU incorporation assay was performed with a Cell-Light EdU kit (Ribobio Co., Ltd., Guangzhou, China) according to the manufacturer’s instructions. Briefly, C17.2 NSCs were cultured in six-well plates coated with poly-d-lysine at a cell density of 1.5 × 105 cells per well, and the cells were then labeled with 50 μM EdU (1:1000) and incubated for an additional 2 h before the cells were fixed with 4 % formaldehyde for 15 min at room temperature and treated with 0.5 % Triton X-100 for 20 min at room temperature for permeabilization. After washing with PBS for three times, each well of cells was reacted with 100 μL of 1× ApolloIV reaction cocktail for 30 min. Subsequently, the nucleus was counterstained with Hoechst 33342 and the cells were observed using a fluorescence microscope (IX70, Olympus).
Plasmid Construction and Transfection
Human CIRBP complementary DNA (cDNA) clone (NC_000019) in pEGFP-N2 vector was a gift from Dr. Wenbin Zhang in the lab. The control transfection was performed by pEGFP-N2 vector without CIRBP. Overexpression of CIRBP by these cells was verified by Western blotting using anti-CIRBP antibody as described below.
Transfection of C17.2 neural stem cells with CIRBP cDNA was performed by using Lipofectamine 2000 transfection reagent (Invitrogen, USA) according to the manufacturer’s procedure. In brief, cells were plated in six-well plates (Nunc) at a cell density of 10,000 cells per well and were allowed to grow overnight to achieve 80 % confluency. Transfection complexes, consisting of 2.5 μg pEGFP-N2 vector plasmid DNA or pEGFP-N2-CIRBP plasmid DNA and 6 μL Lipofectamine reagent, were added to the wells in Opti-MEM® Medium (Invitrogen, USA). Cells were analyzed 24 h after lipofection for transfection efficiency and viability.
Transfection of primary neural stem cells with CIRBP cDNA was performed by electroporation. In brief, the primary neurospheres were collected when diameters ranged between 80 and 120 μm, and dissociated with 0.05 % trypsin and 200 mM EDTA for 10 min at 37 °C, and mechanically triturated with fire-polished glass pipettes. The single cells were resuspended at a density of 1 × 107 cells per mL of serum-free Opti-MEM® medium. Mixture of the single cell suspension with plasmid DNA makes its final concentration reached 1 × 106 cells and 10 μg plasmid DNA (1 μg/μL) in 100 μL solutions. Two pulses of 125 V, 7.5 ms each at 50 ms intervals, were delivered through electroporation cuvettes (2 mm gap) with a NEPA21 electroporator. After electroporation, the mixture in the cuvette was supplemented with 2 mL serum-free neural stem cell media and transferred gently into a prepared uncoated six-well plate. Cells were analyzed 48 h after electroporation for transfection efficiency and viability.
Real-time Reverse Transcription-PCR
Cells were harvested for total RNA isolation using Trizol reagent (Invitrogen) according to manufacturer’s instructions. After reverse transcription, real-time PCR was performed using ABI7500 system. The reaction was made in 10 μL of SYBR Green I (Takara), 0.5 μM of each 5′ and 3′ primer, 2 μL cDNA, and H2O to a final volume of 20 μL. Samples were amplified for 40 cycles with a denaturation at 95 °C for 5 s, annealing, and extension at 57.5 °C for 34 s. SYBR green fluorescence was measured to determine the amount of double-stranded DNA. To discriminate specific from nonspecific cDNA products, a melting curve was obtained at the end of each run. Relative messenger RNA (mRNA) levels of target genes were normalized to GAPDH and compared with the control using the 2−ddCt methods. The primer sequences used in this study were listed below.
For rat CIRBP,
5′-TTACTGTTTACCATGAGCCATG-3′ (forward) and 5′-CACACAACCCGACAATTTAG-3′ (reverse).
For rat glyceraldehyde-3-phosphate dehydrogenase (GAPDH),
5′-TACCCACGGCAAGTTCAACG-3′ (forward) and 5′-CACCAGCATCACCCCATTTG-3′ (reverse).
For mouse CIRBP,
5′-TCCAGAGACTACTATGCCAG-3′ (forward) and 5′-GAACGGAAAGGACTACAAAA-3′ (reverse).
For mouse glyceraldehyde-3-phosphate dehydrogenase (GAPDH),
5′-AATGGTGAAGGTCGGTGTGA-3′ (forward) and 5′-GCTCCTGGAAGATGGTGATG-3′ (reverse).
For mouse Cyclin D1,
5′-GGATGCTGGAGGTCTGTGAG-3′ (forward) and 5′-CGGCAGTCAAGGGAATGGTC-3′ (reverse).
Cell Cycle Analysis
For analysis of cell cycle, cells with different treatments were trypsinized, washed twice in PBS, and fixed overnight at −20 °C in 300 μL PBS and 700 μL ethanol. The fixed cells were spun down gently in 200 μL extraction buffer (0.1 % Triton X-100, 45 mM Na2HPO4 and 2.5 mM sodium citrate) at 37 °C for 20 min and then stained with propidium iodide (BD Biosciences, San Jose, CA, USA) (50 μg/mL) containing 50 μg/mL RNase A for 30 min at 37 °C in the dark, and subsequently analyzed by FACS. The experiment was repeated for at least three times, and the data were analyzed using CellQuestk and ModFitk software.
Western Blotting Analysis
Cells were washed twice with ice-cold PBS and lysed with buffer containing Tris-HCl (50 mM, pH = 7.4), NP-40 (1 %), Na-deoxycholate (0.25 %), NaCl (150 mM), EDTA (1 mM), PMSF (1 mM), Na3VO4 (1 mM), and NaF (1 mM) for total extract. Protein concentration was determined by the BCA protein assay (Pierce Chemical Co.). Equal amounts of cell lysates were separated by 10 % SDS-polyacrylamide gel electrophoresis and electro-transferred onto nitrocellulose membranes. Membranes were then incubated in blocking solution (5 % nonfat milk in 20 mM Tris-HCl, 150 mM NaCl, 0.1 % Tween-20) (TBS-T), followed by incubation with the indicated antibodies at 4 °C overnight. The membranes were then washed in TBS-T and incubated with HRP-conjugated secondary antibodies for 1 h at room temperature. Enhanced chemiluminescence (ECL) Western blotting substrate (Pierce) was used to detect the immunoreactive signals with an ECL-based FluorChem FC2 image system (Alpha Innotech). Rabbit anti-CIRBP was purchased from ProteinTech, and rabbit anti-Cyclin D1 was from Santa Cruz Biotechnology. All Western blotting analyses were performed in triplicates. FluorChem FC2 software was used to analyze the gray values of the bands in each group.
Statistics
Data were presented as the mean ± S.E. Statistical analysis of the data for multiple comparisons was performed by analysis of variance. T test and ANOVA were adopted for comparison. A value of p < 0.05 was considered statistically significant.