Abstract
α-Cyclodextrin glycosyltransferase (α-CGTase) can convert starch into α-cyclodextrin with various proportions of β-cyclodextrin and/or γ-cyclodextrin in the products. To improve the α-cyclodextrin-forming specificity, directed evolution on the wild-type α-CGTase was performed by constructing mutant library with error-prone PCR method. The positive mutant strains were selected in combination of starch plate screening with HPLC detection of the products. An α-CGTase from the mutant strain (assigned No. 95) was found to be able to increase the α:β ratio in product mixture from 3.4 to 7.8 in comparison with the wild-type α-CGTase. Sequence alignment indicated that two mutations occurred in the No. 95 mutant α-CGTase, which were Y167H and A536V. Reverse mutation revealed that Y167H was responsible for this change. A series of 167 site-substituted mutants could improve the α:β ratio to different extents as indicated by saturated mutagenesis, with Y167H as the best substitution. In conclusion, Y167 was confirmed to be one of the main subsites in the −6 domain of α-CGTase that is responsible for the α:β ratio in the product mixture. Y167H is most preferable among all types of mutant enzymes tested at this site. The reconstructed Y167H (i.e., No. 95) α-CGTase showed better potential for α-cyclodextrin production on industrial scale.
Similar content being viewed by others
References
Arnold, K., Bordoli, L., Kopp, J., & Schwede, T. (2006). The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling. Bioinformatics, 22, 195–201.
Costa, H., Distéfano, A. J., et al. (2011). The residue 179 is involved in product specificity of the Bacillus circulans DF 9R cyclodextrin glycosyltransferase. Applied Microbiology and Biotechnology, 94(1), 123–130.
del-Rio, G., Morett, E., et al. (1997). Did cyclodextrin glycosyltransferases evolve from alpha-amylases? FEBS Letters, 416(2), 221–224.
Guex, N., & Peitsch, M. C. (1997). SWISS-MODEL and the Swiss-Pdb Viewer: An environment for comparative protein modeling. Electrophoresis, 18, 2714–2723.
Kumar, V. (2010). Analysis of the key active subsites of glycoside hydrolase 13 family members. Carbohydrate Research, 345(7), 893–898.
Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 27, 680–685.
Leemhuis, H. (2001). The remote substrate binding subsite −6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism. Journal of Biological Chemistry, 277(2), 1113–1119.
Leemhuis, H., Dijkstra, B. W., et al. (2002). Mutations converting cyclodextrin glycosyltransferase from a transglycosylase into a starch hydrolase. FEBS Letters, 514(2–3), 189–192.
Leemhuis, H., Kelly, R. M., et al. (2010). Engineering of cyclodextrin glucanotransferases and the impact for biotechnological applications. Applied Microbiology and Biotechnology, 85(4), 823–835.
Leemhuis, H., Uitdehaag, J. C., et al. (2002). The remote substrate binding subsite −6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism. Journal of Biological Chemistry, 277(2), 1113–1119.
Li, Z., Zhang, J., et al. (2009). Mutations at subsite −3 in cyclodextrin glycosyltransferase from Paenibacillus macerans enhancing alpha-cyclodextrin specificity. Applied Microbiology and Biotechnology, 83(3), 483–490.
Li, Z. F., Zhang, J. Y., et al. (2009). Mutations of lysine 47 in cyclodextrin glycosyltransferase from Paenibacillus macerans enhance beta-cyclodextrin specificity. Journal of Agriculture and Food Chemistry, 57(18), 8386–8391.
Nakagawa, Y., Takada, M., et al. (2006). Site-directed mutations in alanine 223 and glycine 255 in the acceptor site of gamma-cyclodextrin glucanotransferase from alkalophilic Bacillus clarkii 7364 affect cyclodextrin production. Journal of Biochemistry, 140(3), 329–336.
Schwede, T., Kopp, J., Guex, N., & Peitsch, M. C. (2003). SWISS-MODEL: An automated protein homology-modeling server. Nucleic Acids Research, 31, 3381–3385.
Tachibana, Y., Takaha, T., et al. (2000). Acceptor specificity of 4-alpha-glucanotransferase from Pyrococcus kodakaraensis KOD1, and synthesis of cycloamylose. Journal of Bioscience and Bioengineering, 90(4), 406–409.
Uitdehaag, J. C., Mosi, R., et al. (1999). X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the alpha-amylase family. Natural Structural Biology, 6(5), 432–436.
van der Veen, B. A., Uitdehaag, J. C., et al. (2000). Rational design of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 to increase alpha-cyclodextrin production. Journal of Molecular Biology, 296(4), 1027–1038.
Yoon, S. H., & Robyt, J. F. (2006). Optimized synthesis of specific sizes of maltodextrin glycosides by the coupling reactions of Bacillus macerans cyclomaltodextrin glucanyltransferase. Carbohydrate Research, 341(2), 210–217.
Acknowledgments
This work was supported by the National Natural Science Foundation of People’s Republic of China (Project No. 31171643).
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Song, B., Yue, Y., Xie, T. et al. Mutation of Tyrosine167Histidine at Remote Substrate Binding Subsite −6 in α-Cyclodextrin Glycosyltransferase Enhancing α-Cyclodextrin Specificity by Directed Evolution. Mol Biotechnol 56, 232–239 (2014). https://doi.org/10.1007/s12033-013-9699-8
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12033-013-9699-8