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Cloning, Expression, Sequence Analysis, and Partial Characterization of Two Alkaline β-1, 4-endoglucanases of Phaeosphaeria sp. LH21 from Deep-Sea Mud

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Abstract

Here we cloned and expressed two alkaline β-1, 4-endoglucanases of Phaeosphaeria sp. LH21 from deep-sea mud. The two enzymes shared 71 and 63 % of identities with their known β-1, 4-endoglucanases, respectively. According to the primary and spatial structures, the potential active sites of one of the two enzymes could be Asp122 and Asp11, while the other enzyme could be Asp16. The enzymatic properties of their recombinant enzymes from Pichia pastoris GS115 showed that they were optimally active at pH 8 and 60–65 °C, exhibited >90 % residual relative activities at pH 3–10, and obtained relative activities >75 % at pH 5–10.

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References

  1. Henrissat, B., & Davies, G. (1997). Current Opinion in Structural Biology, 7, 637–644.

    Article  CAS  Google Scholar 

  2. Cherry, J. R., & Fidantsef, A. L. (2003). Current Opinion in Biotechnology, 14, 438–443.

    Article  CAS  Google Scholar 

  3. Baba, Y., Shimonaka, A., Koga, J., Murashima, K., Kubota, H., & Kono, T. (2005). BioscienceBiotechnology and Biochemistry, 69, 1198–1201.

    Article  CAS  Google Scholar 

  4. Liu, G., Wei, X., Qin, Y., & Qu, Y. (2010). Journal of General and Applied Microbiology, 56, 223–229.

    Article  CAS  Google Scholar 

  5. Murashima, K., Nishimura, T., Nakamura, Y., Koga, J., Moriya, T., Sumida, N., et al. (2002). Enzyme and Microbial Technology, 30, 319–326.

    Article  CAS  Google Scholar 

  6. Schülein, M. (1997). Journal of Biotechnology, 57, 71–81.

    Article  Google Scholar 

  7. Shibuya, H., & Kikuchi, T. (2008). Bioscience, Biotechnology, and Biochemistry, 72, 1325–1332.

    Article  CAS  Google Scholar 

  8. Wonganu, B., Pootanakit, K., Boonyapakron, K., Champreda, V., Tanapongpipat, S., & Eurwilaichitr, L. (2008). Protein Expression and Purification, 58, 78–86.

    Article  CAS  Google Scholar 

  9. Zhao, X., Wang, W., & Wei, D. (2013). Journal of Microbiology, 51, 82–87.

    Article  CAS  Google Scholar 

  10. Arnold, K., Bordoli, L., Kopp, J., & Schwede, T. (2006). Bioinformatics, 22, 195–201.

    Article  CAS  Google Scholar 

  11. Zhao, X., Wang, W., Wang, F., & Wei, D. (2012). Bioresource Technology, 110, 539–545.

    Article  CAS  Google Scholar 

  12. Guo, R., Ding, M., Zhang, S., Xu, G., & Zhao, F. (2008). Journal of Comparative Physiology B-biochemical Systemic and Environmental Physiology, 178, 209–215.

    CAS  Google Scholar 

  13. Hirvonen, M., & Papageorgiou, A. (2003). Journal of Molecular Biology, 329, 403–410.

    Article  CAS  Google Scholar 

  14. Igarashi, K., Ishida, T., Hori, C., & Samejima, M. (2008). Applied and Environmental Microbiology, 74, 5628–5634.

    Article  CAS  Google Scholar 

  15. Sakamoto, K., & Toyohara, H. (2009). Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology, 152, 390–396.

    Article  Google Scholar 

  16. Xu, B., Janson, J., & Sellos, D. (2001). European Journal of Biochemistry, 268, 3718–3727.

    Article  CAS  Google Scholar 

  17. Zhao, J., Shi, P., Li, Z., Yang, P., Luo, H., Bai, Y., et al. (2012). Bioresource Technology, 121, 404–410.

    Article  CAS  Google Scholar 

  18. Gusakov, A., Sinitsyn, A., Berlin, A., Markov, A., & Ankudimova, N. (2000). Enzyme and Microbial Technology, 27, 664–671.

    Article  CAS  Google Scholar 

  19. Haakana, H., Miettinen-Oinonen, A., Joutsjoki, V., Mäntylä, A., Suminen, P., & Vehmaanperä, J. (2004). Enzyme and Microbial Technology, 34, 159–167.

    Article  CAS  Google Scholar 

  20. Shimonaka, A., Baba, Y., Koga, J., Nakane, A., Kubota, H., & Kono, T. (2004). Bioscience, Biotechnology, and Biochemistry, 68, 2299–2305.

    Article  CAS  Google Scholar 

  21. Davies, G. J., Dodson, G. G., Hubbard, R. E., Tolley, S. P., Dauter, Z., Wilson, K. S., et al. (1993). Nature, 365, 362–364.

    Article  CAS  Google Scholar 

  22. Karlsson, J., Siika-aho, M., Tenkanen, M., & Tjerneld, F. (2002). Journal of Biotechnology, 99, 63–78.

    Article  CAS  Google Scholar 

  23. Koga, J., Baba, Y., Shimonaka, A., Nishimura, T., Hanamura, S., & Kono, T. (2008). Applied and Environmental Microbiology, 74, 4210–4217.

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This research was supported by the National Basic Research Program of China (973, Program NO. 2012CB721103), National High Technology Research and Development Program of China (863, Program NO. 2012AA022206), National Natural Science Foundation of China (31360217), and Fundamental Research Funds for the Central Universities.

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Correspondence to Dong-Zhi Wei or Wei Wang.

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Zhao, XH., Wei, DZ. & Wang, W. Cloning, Expression, Sequence Analysis, and Partial Characterization of Two Alkaline β-1, 4-endoglucanases of Phaeosphaeria sp. LH21 from Deep-Sea Mud. Appl Biochem Biotechnol 173, 1295–1302 (2014). https://doi.org/10.1007/s12010-014-0924-0

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  • DOI: https://doi.org/10.1007/s12010-014-0924-0

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