Hydroxychloroquine and COVID-19: a Rheumatologist’s Take on the Lessons Learned


Purpose of Review

Told from the viewpoint of rheumatologists, this review tells the story of hydroxychloroquine and its swift ascent to become a household name as a therapeutic strategy against the novel SARS-CoV-2 virus. This review describes the history, mechanisms, pharmacokinetics, therapeutic applications, and safety profile of hydroxychloroquine as an immunomodulatory and antiviral agent. It also summarizes the major studies that launched and assessed the use of hydroxychloroquine against COVID-19 infection.

Recent Findings

More recent literature calls into question the long-held dogma that endolysosomal alkalinization is the primary mode of action of hydroxychloroquine. Ongoing uncertainty about the multiple potential mechanisms contributing to the therapeutic effect of hydroxychloroquine in rheumatic and viral disease led to a natural avenue for exploration in the treatment of COVID-19. Taken as a whole, the literature does not support utilizing hydroxychloroquine to treat or prevent infection from the SARS-CoV-2 virus. This is, at least in part, due to the wide variability in hydroxychloroquine pharmacokinetics between patients and difficulty achieving adequate target tissue concentrations of hydroxychloroquine without encountering unacceptable toxicities.


Hydroxychloroquine continues to be a routinely prescribed, well-tolerated, effective, and low-cost treatment for rheumatic disease. Its therapeutic versatility has led to frequent repurposing for other conditions, most recently as an investigative treatment against the SARS-CoV-2 virus. Despite overall negative findings, the intense study of hydroxychloroquine against COVID-19 infection has enhanced our overall understanding of how hydroxychloroquine operates in autoimmune disease and beyond.


Following the initial recognition of coronavirus disease 2019 (COVID-19) caused by novel SARS-CoV-2 virus in December of 2019, confirmed cases rose exponentially to reach global pandemic status by March of 2020, adding urgency to quest for safe and effective treatments [1]. As a result, a number of existing medications were repurposed to manage this infection [2]. Among these off-label therapies, hydroxychloroquine (HCQ) quickly rose to the world stage as a promising candidate. In the pre-COVID-19 era, infectious disease specialists and rheumatologists routinely prescribed HCQ for its antimicrobial and immunomodulatory properties, excellent safety profile, and low cost. Herein we will review the historical context and mechanistic considerations underlying the attempt to use HCQ in viral diseases, followed by an update on the observational and clinical trial data evaluating its efficacy in COVID-19. As rheumatologists, we recognize that despite all of the controversy, politicizing, and ethical quandaries surrounding HCQ in COVID-19, this moment has provided greater insight into the workings of a therapeutic cornerstone in our field, and careful attention to this literature can inform not only our own practice but also the practice of others interested in repurposing this drug in the future.

History and Clinical Applications

Throughout history, the antimalarial HCQ and its predecessors quinine, quinacrine, and chloroquine (CQ) have proven to be therapeutically versatile [3]. In 1820, quinine was extracted from cinchona bark, which was first documented as curing fevers in the 1630s and broadly utilized over the next two centuries as a medicinal cure-all [3]. Quinacrine was introduced for malaria treatment in the 1930s, and World War II soldiers taking quinacrine were incidentally observed to have an improvement in cutaneous lupus and inflammatory arthritis leading to a landmark case series published in the Lancet detailing the success of mepacrine, another name for quinacrine, in treating systemic lupus erythematosus [4]. In the 1940s, CQ emerged as an antiparasitic and later gained traction in a wide array of other infectious diseases as it became less effective in treating the rising number of CQ-resistant malaria strains [5].

The synthesis of HCQ in 1946 by American chemists Alexander Surrey and Henry Hammer provided a conveniently produced, economical, safe, and better tolerated medication than its immediate parent drug CQ [3, 6]. First approved for use in 1955, HCQ is currently approved by the US Food and Drug Administration to treat malaria, discoid and systemic lupus erythematosus, and rheumatoid arthritis [7, 8]. However, numerous off-label uses exist including cutaneous dermatomyositis, extra-glandular manifestations of Sjogren’s syndrome, sarcoidosis, antiphospholipid syndrome, porphyria cutanea tarda, and Q fever [9,10,11,12]. The far-reaching therapeutic range of HCQ is partially due to its unique and highly variable pharmacokinetic profile as well as its multiple proposed mechanisms of action.

Structure and Pharmacokinetics

Hydroxychloroquine is a 4-aminoquinoline comprised of two aromatic rings [6]. It is a weak base that is mostly absorbed in the upper gastrointestinal tract with approximate oral bioavailability of 70%, although there is wide between-patient variability in the extent of absorption [13,14,15]. Hydroxychloroquine is primarily metabolized by cytochrome P450 enzymes in the liver to multiple active metabolites, and up to approximately one-fourth of unchanged drug is eliminated through the kidneys [8, 15]. While there are no specific guidelines for dose adjustment in hepatic and renal impairment, the updated American Academy of Ophthalmology (AAO) guidelines recognize renal disease, along with using HCQ at high doses for a long period of time, as major risk factors for the development of retinal toxicity [16]. Several properties of HCQ contribute to a high volume of distribution of approximately 40,000 l including low protein binding (50%), lipophilicity, and avid tissue binding [17, 18]. While HCQ accumulates in several tissues, it has an affinity for areas with high melanin content, such as the retinal pigment epithelium [17]. Interestingly, animal data suggests that accumulation within these tissues occurs over a period of several months; this may be one mechanism contributing to the delay in clinical benefit once HCQ is administered [19]. Due to high volume of distribution relative to drug clearance, HCQ has a long terminal elimination half-life, on the order of 40 days [20].

Due to variability in absorption, metabolism, excretion, and other physiologic processes, blood levels of HCQ differ more than 10-fold between patients [21, 22]. This inter-patient pharmacokinetic variability, as well as unpredictable and gradual accumulation within tissues, may explain the differences in how patients respond and length of time to the development of retinal toxicity.

Hydroxychloroquine in Rheumatic Disease

Across decades, HCQ remains a mainstay pharmacotherapy in the treatment of a variety of rheumatic diseases. Patients with systemic lupus erythematosus who consistently take HCQ experience improvements in overall and disease-free survival, end organ damage accrual, as well as severity and frequency of flares; beyond lupus, patients with rheumatic disease who take HCQ benefit from improvements in their thrombotic risk, lipid profile, and glycemic index [23]. The question of how HCQ results in these benefits, particularly in lupus, remains a topic of great interest and ongoing study. As shown in Fig. 1, HCQ is theorized to disturb autoantigen presentation by major histocompatibility complex class II (MHC class II) cells to T cells and subsequent T and B cell differentiation and maturation [14, 25]. It is also thought to impair toll-like receptor (TLR) 7 and 9 and cyclic GMP-AMP synthase-stimulator of interferon genes (cGAS-STING) signaling pathways, the latter being a significant source of type 1 interferon, ultimately reducing production of proinflammatory cytokines [14, 26].

Fig. 1

Major proposed mechanisms of HCQ in autoimmune disease. Figure adapted from Schrezenmeier et al. [14], Wallace et al. [23], and Nirk et al. [24]. (Clockwise from bottom left) HCQ raises the pH of the lysosomal compartment, inhibiting hydrolytic enzymatic processing of extracellular autoantigen endocytosed by the cell. HCQ raises the pH of the autophagosomal compartment, inhibiting degradation of intracellular debris and autophagic flux. HCQ hinders fusion of lysosomes with autophagosomes, diminishing successful MHC class II-mediated autoantigen presentation by antigen-presenting cells. HCQ thwarts naïve T cell and B cell activation, subsequently decreasing production of autoreactive antibodies. HCQ limits Toll-like receptor signaling and cGAS-STING pathways, lessening production of proinflammatory cytokines. HCQ, hydroxychloroquine; TCR, T cell receptor; cGAS-STING, cyclic GMP-AMP stimulator of interferon genes; TLR, Toll-like receptor

A long-standing theory of how HCQ carries out these functions is lysosomotropism [27]. The lysosome, an acidic subcellular organelle present in most eukaryotic cells, plays a central role in cellular homeostasis and metabolic signaling through both catabolic and anabolic mechanisms [28]. Lysosomes degrade cellular components and macromolecules via the autophagy pathway, endocytosis, and phagocytosis [29••]. Lysosomal function is dependent on maintenance of an acidic pH. The lysosomotropism concept postulates that basic compounds such as HCQ accumulate inside the lysosome, raising the pH of the endolysosomal compartment and subsequently disrupting hydrolytic enzymatic functions, autoantigen processing, and downstream signaling [14, 30]. However, more recent literature suggests that lysosomal alkalization is transient following HCQ exposure [30••]. Furthermore, an alternative mechanism that is not dependent on lysosomal alkalinization suggests that HCQ triggers mammalian target of rapamycin complex 1 (mTORC1) and calcium-mediated lysosome biogenesis as a response to stress [30••]. Interestingly, it has been demonstrated in lupus-prone mice that chronic activation of mTOR complex 2 (mTORC2) impedes cleavage of Rab39a by caspase-1 which prevents lysosomal acidification [31]. To expand further, it is thought that lysosomal defects may contribute to aging as well as a number of chronic conditions, including autoimmunity [32]. For example, macrophages from lupus-prone mice have been identified as having immature lysosomes that cannot prevent the accumulation of apoptotic debris containing IgG immune complexes on cell surfaces, thus continuously exposing cytoplasmic sensors to auto-antigen [33•].

Dysregulation of autophagy has also been linked to the pathogenesis of autoimmune disease, and HCQ is one of the two FDA-approved autophagy inhibitors [34•]. Autophagy is the process by which lysosomes fuse with autophagosomes to remove pathogens and breakdown cellular debris and misfolded proteins [35]. It is widely accepted that HCQ impairs autophagic flux, the amount of degraded and recycled cellular material [34•]. Emerging data, however, suggests that CQ and HCQ may disrupt endosome-lysosome fusion independent of the autophagy pathway through derangement of the intracellular compartments [34•]. Our understanding of the likely multiple mechanisms underlying the numerous benefits of HCQ continues to evolve and warrants ongoing study.

Using a chronic daily dosing strategy, HCQ offers reliable and effective immunomodulation while being exceptionally safe and non-immunosuppressive. Typical dosing of HCQ for autoimmune diseases falls between 200 and 400 mg daily, in either single or multiple doses [12]. Updated 2016 AAO HCQ dosing guidelines recommend a maximum of 5 mg/kg/d, using real body weight, to prevent the adverse effect of irreversible retinopathy, the risk of which is dose and duration dependent at less than 1% for up to 5 years, but rising to 20% at 20 years [16]. Anecdotally, the most commonly encountered adverse effects to HCQ in rheumatology clinical practice include gastrointestinal distress and dermatologic reactions. Rare but serious complications include cardiomyopathy, QT prolongation, ventricular arrhythmias, proximal neuropathy and/or myopathy, myelosuppression, and hypoglycemia [12]. HCQ crosses the placenta and is transferred in breast milk, although no major permanent toxicities have been noted in either the fetus or the child [14, 36]. In fact, the 2020 American College of Rheumatology Reproductive Health Guidelines strongly recommend that women with rheumatic disease continue HCQ through pregnancy and conditionally recommend that pregnant women with positive anti-Ro/La take HCQ to prevent fetal development of congenital heart block [37].

Hydroxychloroquine as an Antiviral in the Pre-COVID-19 Era

There has been a long-held interest in repurposing antimalarials like HCQ to treat a variety of viruses. Several potential antiviral mechanisms for HCQ have been proposed, including interfering with viral surface receptor binding, biosynthesis of sialic acids and subsequent ligand recognition, pH gradient-dependent endosome-mediated cell entry and virus-endosome fusion, viral uncoating, posttranslational modification of the viral protein, proteolytic processing, viral budding, and maturation of the viral protein, among others [38]. HCQ also has immunomodulatory effects that are possibly effective against viruses, including improving the transport of viral particles to dendritic presenting cells and subsequent CD8+ T cell activation, as well as inhibition of p38 mitogen-activated protein kinase (MAPK) signaling, which is important for viral replication [38]. Further contributing to a largely anti-inflammatory response against pathogens, CQ and HCQ are thought to inhibit TLR 7 and 9 signaling, thus reducing production of pro-inflammatory cytokines and evolution into cytokine storm [14, 34, 38,39,40].

HCQ has been evaluated as a potential antiviral agent against two particularly notable viruses across history, human immunodeficiency virus (HIV) and influenza [5]. The rationale for researching HCQ as a treatment of HIV included targeting immune activation-mediated decline in CD4 count, delaying or reducing the reliance on antiretroviral therapy (ART) and their potential side effects, and providing a low-cost option in resource scarce areas [41]. Amidst the acquired immunodeficiency syndrome (AIDS) pandemic, Chiang et al. found that not only did both enantiomers of HCQ suppress HIV-1 activity by raising the pH of the endosomal compartments and inhibiting posttranslational modification of gp120, but also curbed HIV-1 replication in a dose-dependent fashion in both recently and chronically infected T and monocyte cell lines [42]. Subsequent studies, however, showed conflicting results, including a randomized placebo-controlled trial of 83 asymptomatic HIV-infected patients off of ART who were treated with either HCQ 400 mg daily or placebo daily for 48 weeks, with results showing no significant difference in CD8+ T cell activation, a significant decline in CD4+ T cell count, and a significant increase in viral load in the HCQ group compared to the placebo group [41].

Regarding exploration of the therapeutic utility of HCQ for influenza, rising viral strain resistance against adamantanes (i.e., oseltamivir) around the world led to a push to identify new drugs with antiviral properties against influenza A and B [43]. Shibata and colleagues discovered that CQ raised the pH beyond the point where the viral envelope of Influenza B could successfully fuse with the lysosome in canine kidney cells, thus hampering viral uncoating [44]. However, later studies identified inconsistencies, even going so far as to say that chloroquine enhanced influenza A replication in vitro [45].

In 2002, at the onset of the severe acute respiratory syndrome (SARS) pandemic due to SARS coronavirus (SARS-CoV), efforts were made to swiftly determine the viral mechanism as well as a safe and effective treatment [46]. Li et al. found that angiotensin-converting enzyme 2 (ACE2) was a functional receptor of the S1 domain on the SARS-CoV spike (S) protein [47]. Vincent et al. found that CQ disrupts viral spread of SARS-CoV both pre-infection (24 h prior) and post-infection (3 to 5 h after) in Vero E6 cells in a dose-dependent manner [46]. This group-theorized CQ accomplished this through terminal glycosylation of ACE2, thus reducing its affinity to bind the S protein and interfering with onset of infection [46]. It is worth noting that Vero E6 cells are kidney epithelial cells from the African Green Monkey which are interferon deficient; these cells are ideal clones for achieving high viral nucleic acid copies but do not necessarily mimic the physiologic conditions of the respiratory epithelium in vivo [48]. By mid-2003, SARS was felt to be contained, somewhat slowing further investigation into new therapeutic agents and preventative vaccines [49].

Hydroxychloroquine as an Antiviral in the COVID-19 Era

As of mid-September 2020, COVID-19 is proving to be a far more formidable disease than SARS, approaching nearly 30 million cases and 1 million deaths worldwide [50]. Based on prior data supporting its use in SARS-CoV virus as well as the hypotheses that HCQ could inhibit viral replication due to lysosomal deacidification and the ability to prevent progression into cytokine storm, HCQ was repurposed as an investigational therapy to treat the SARS-CoV-2 virus.

Early in vitro studies attempted to identify the effective concentration of HCQ needed to inhibit half (EC50) of SARS-COV-2 viral replication [51, 52]. These in vitro targets were then used for pharmacokinetic/pharmacodynamic (PK/PD) modeling to establish the target HCQ doses needed to achieve antiviral activity against SARS-CoV-2 infection [51]. However, the researchers likely did not account for the differences between the in vitro assay and the in vivo target tissue [53, 54]. Specifically, the in vitro assay mimics the amount of free HCQ in plasma or extracellular fluid, whereas HCQ’s in vivo antiviral activity requires adequate intracellular concentrations within target tissues, which for coronaviruses is thought to be respiratory tract epithelial cells [53, 55]. Accounting for these discrepancies, investigators from the FDA published an analysis demonstrating that free intracellular HCQ concentrations in lung tissue is predicted to be 10 to 100 times lower than in vitro EC50 targets, and therefore, it is unlikely that we can safely administer the doses of HCQ necessary to achieve antiviral activity against SARS-CoV-2 in vivo [53••].

During one of the earliest prospective cohort analyses of COVID-19 patients in February of 2020, Huang et al. noted that patients infected with SARS-CoV-2 virus had a highly proinflammatory cytokine profile and that elevations in some of these cytokines, such as granulocyte colony-stimulating factor (G-CSF) and tumor necrosis factor-alpha (TNF-α), were predictive of more severe disease [56]. Shortly thereafter, Chen et al. performed a retrospective review of COVID-19 patients, noting significantly higher levels of proinflammatory molecules, including interleukin-2 receptor (IL-2R) and interleukin-6 (IL-6), significantly lower CD4+ T cells and CD8+ T cells, significantly lower naïve CD45RA+ T regulatory cells, and a trend toward lower natural killer cells in severe cases as compared to moderate cases [57•]. These studies highlight the ways in which hyperinflammation and immune system dysfunction contribute to the pathogenesis of COVID-19 [58]. In theory, immune-modulating therapies such as HCQ could help tip the immune response toward a less inflammatory state, curb production of proinflammatory cytokines, and prevent progression to a deadly cytokine storm.

Following initial in vitro studies suggesting the possible utility of HCQ against COVID-19, numerous observational and clinical trials began to explore its efficacy and safety in humans (Table 1). A pivotal initial study published on March 20, 2020, by Gautret et al. reported on 42 patients with or without exposure to HCQ, suggesting lower viral carriage in those treated with HCQ and particularly low viral carriage in those treated with both HCQ and azithromycin. Importantly, clinical efficacy endpoints beyond nasal carriage were not discussed [59]. Many raised concerns about methodological flaws in this study, including the lack of randomization and the exclusion of 6 patients treated with HCQ who were lost to follow-up due to ICU transfer (3 patients), death (1 patient), leaving the hospital (1 patient), and treatment discontinuation (1 patient). Despite these concerns, this study received international attention and spurred many to use this medication despite the absence of a randomized, placebo-controlled clinical trial.

Table 1 Major pre-clinical, observational, and randomized controlled trial data studying hydroxychloroquine in COVID-19

Over the next several months, numerous pre-print studies that had not yet undergone peer review were rapidly posted to open-access servers such as MedRxiv.org. These pre-prints allowed the rapid dispersion of study results but also led to many questions regarding each report’s methodology and accuracy, especially in light of their often-conflicting findings. Some of the most highly cited articles were pre-print studies, including a randomized controlled trial in 62 patients suggesting efficacy of HCQ for COVID-19 [71] and a very recently published observational study from the US Veterans Health Administration health system that suggested an association between HCQ and increased overall mortality in hospitalized patients with COVID-19 [72]. Observational studies published in peer-reviewed journals also reported conflicting findings, and further confusion ensued after the infamous retraction of a major observational study published in The Lancet, following concerns about the credibility of the data used in its analysis.

The first major randomized controlled trial examining HCQ in COVID-19 published in the peer-reviewed literature appeared on May 6, 2020, by Tang et al [65]. This study compared HCQ with standard of care in 150 hospitalized patients with COVID-19 across 16 medical centers in China, finding no difference in the negative conversion rate of SARS-CoV-2 by 28 days [65]. Subsequently, multiple additional randomized-controlled trials have replicated these findings in hospitalized patients, while also demonstrating lack of efficacy for post-exposure prophylaxis or in outpatients with mild infections. Other major studies have been halted due to lack of efficacy, including the HCQ arm of the World Health Organization SOLIDARITY trial, the UK National Institute for Health Research RECOVERY trial, and the US National Institutes of Health ORCHID trial. On June 15, 2020, the US FDA revoked the Emergency Use Authorization that permitted the use of chloroquine and hydroxychloroquine from the national stockpile for hospitalized patients. Overall, though many ongoing trials have yet to report results, clinical evidence is rapidly accumulating that HCQ is not effective for the treatment or prevention of COVID-19.


As rheumatologists, we have few remedies in our armamentarium that can match the therapeutic utility, safety profile, and accessibility of HCQ. Patients of all ages and ethnicities with an array of underlying autoimmune conditions take HCQ with a high level of tolerability; this ultimately allows for long-term dosing, maximizing its immunomodulatory yet non-immunosuppressive effects. Despite clinical use for nearly three quarters of a century, the exact mechanisms of HCQ in autoimmune and viral diseases remain uncertain. In autoimmune disease, HCQ has been shown to impair TLR and cGAS-STING signaling pathways, disrupt endosome-lysosome fusion, and disturb autoantigen presentation by MHC class II to T cells. A number of antiviral mechanisms have been suggested, postulating that both CQ and HCQ are able to interfere with nearly every step of the viral life cycle. The long-standing dogma that HCQ primarily functions through pH gradient-dependent lysosomotropism and endolysosomal alkalinization has come into question as lysosomal acidification may be transient and lysosomes are now regarded as maestros of the cell’s response to stress [29, 30]. Lysosomes are dynamic mediators of cell homeostasis, partly due to their role in maintaining a steady rate of autophagy; lysosomal dysfunction therefore causes imbalances in homeostatic processes and is implicated in a number of conditions including neurodegenerative disease, cardiovascular disease, and autoimmunity [73].

With cases and deaths due to SARS-CoV-2 virus rising exponentially across the globe, both the desperation to determine an effective treatment and the success of utilizing antimalarials against coronaviruses in vitro contributed to HCQ being proffered as a leading therapeutic option. Following anecdotal evidence of possible clinical efficacy, a sudden deluge of studies exploring the safety and efficacy of HCQ against COVID-19 infection became readily available for public consumption, both in scientific spheres and across lay news outlets. Despite initial uncontrolled and non-peer reviewed studies that suggested possible efficacy, multiple randomized controlled trials have now demonstrated that HCQ is not effective in preventing or treating COVID-19 infection in vivo.

The reasons for this failure are complex and multifactorial. We suggest that marked pharmacokinetic variability between patients results in unpredictable responses to the same HCQ regimen, leading to both low drug levels in some patients and acute toxicities in other patients. We also offer that oversimplification of the underlying mechanisms of HCQ and the way it engages with the lysosome may partly be responsible for its lack of clinical efficacy. Importantly, we assert that the inability to achieve sufficient tissue concentrations of HCQ in the lung epithelium, particularly with short-term dosing, is a major reason for the drug’s failure in treating infection with COVID-19. Using HCQ in high doses in an effort to rapidly achieve high plasma concentrations, unfortunately, likely results in unacceptable gastrointestinal and cardiac toxicities that are not commonly seen at typical rheumatologic dosing [74]. This emphasizes the important role for PK/PD models, implemented correctly, to investigate whether optimal dosing is feasible prior to undertaking clinical studies. Moreover, due to the months needed to reach maximum lung concentrations, we highlight that further research is needed to clarify the target intracellular HCQ EC50 against SARS-CoV-2 and whether chronic dosing used to treat rheumatic diseases can achieve these concentrations [75] with the potential for benefit as a prophylactic agent.

In conclusion, despite decades of dependable use and predictable results in the treatment of rheumatic disease, HCQ remains a drug with an ever-expanding number of underlying mechanisms. Reappropriation of HCQ to treat other disease states like COVID-19, irrespective of whether or not it is deemed a triumph, furthers our appreciation for HCQ and how it works, underscoring the importance of ongoing research.


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Udupa, A., Leverenz, D., Balevic, S.J. et al. Hydroxychloroquine and COVID-19: a Rheumatologist’s Take on the Lessons Learned. Curr Allergy Asthma Rep 21, 5 (2021). https://doi.org/10.1007/s11882-020-00983-9

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  • Hydroxychloroquine
  • COVID-19
  • SARS-CoV-2
  • Immunomodulation