Skip to main content

Advertisement

Log in

Intérêt de la spectrométrie de masse de type MALDI-TOF pour l’identification des champignons filamenteux

Interest of MALDI-TOF mass spectrometry for the identification of filamentous fungi

  • Mise au Point
  • Published:
Bio tribune magazine

Résumé

L’identification des champignons filamenteux, moisissures et dermatophytes, repose actuellement sur l’étude morphologique macroscopique et microscopique des colonies et, par conséquence, sur l’expérience du mycologue. Cette approche longue et fastidieuse, souvent imprécise, est incompatible avec les exigences actuelles de diagnostic des infections fongiques. L’identification des champignons filamenteux par MALDI-TOF est un champ d’innovation en pleine expansion. Bien que très peu d’études soient encore disponibles, les premiers travaux ont montré que la spectrométrie de masse MALDI-TOF permet d’obtenir une identification précise des espèces de champignons filamenteux, y compris au sein des complexes d’espèces. La spectrométrie de masse MALDI-TOF représente ainsi le premier outil permettant une identification rapide, précise et standardisée des champignons filamenteux. Les bases de données actuellement disponibles doivent être désormais évaluées dans les différents laboratoires de mycologie cliniques et complétées afin d’élargir le spectre des espèces identifiées.

Abstract

Identification of filamentous fungi, molds and dermatophytes, is currently based on the morphological study of colonies and therefore the experience of the mycologist. These techniques are not sufficiently precise to distinguish between different species within the same section. Furthermore, identification can be delayed for several weeks due to subcultures on specific media. MALDI-TOF MS allows correct identification of filamentous fungi until the species level in more than 95% of cases in most studies. MALDI-TOF MS is a fast and precise identification technique for filamentous fungi; however most of the different databases need to be further evaluated in routine and completed to broaden the spectrum of species identified.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Références

  1. Chamilos G, Lewis RE, Kontoyiannis DP (2008) Delaying amphotericin B-based frontline therapy significantly increases mor tality among patients with hematologic malignancy who have zygomycosis. Clin Infect Dis 47: 503–509

    Article  PubMed  Google Scholar 

  2. Garey KW, Rege M, Pai MP, et al. (2006) Time to initiation of fluconazole therapy impacts mortality in patients with candidemia: a multi-institutional study. Clin Infect Dis 43: 25–31

    Article  PubMed  CAS  Google Scholar 

  3. Parkins MD, Sabuda DM, Elsayed S, Laupland KB (2007) Adequacy of empirical antifungal therapy and effect on outcome among patients with invasive Candida species infections. J Antimicrob Chemother 60: 613–618

    Article  PubMed  CAS  Google Scholar 

  4. Lortholary O, Gangneux JP, Sitbon K, et al. (2011) Epidemiological trends in invasive aspergillosis in France: the SAIF network (2005–2007). Clin Microbiol Infect [Epub ahead of print]

  5. Pagano L, Akova M, Dimopoulos G, et al. (2011) Risk assessment and prognostic factors for mould-related diseases in immunocompromised patients. J Antimicrob Chemother 66Suppl 1: i5–14

    Article  PubMed  CAS  Google Scholar 

  6. Balajee SA, Houbraken J, Verweij PE, et al. (2007) Aspergillus species identification in the clinical setting. Stud Mycol 59: 39–46

    Article  PubMed  CAS  Google Scholar 

  7. Samson RA, Hong S, Peterson SW, et al. (2007) Polyphasic taxonomy of Aspergillus section Fumigati and its teleomorph Neosartorya. Stud Mycol 59: 147–203

    Article  PubMed  CAS  Google Scholar 

  8. Samson RA, Varga J (2009) What is a species in Aspergillus? Med Mycol 47Suppl 1: S13–20

    Article  PubMed  CAS  Google Scholar 

  9. Gilgado F, Cano J, Gené J, Guarro J (2005) Molecular phylogeny of the Pseudallescheria boydii species complex: proposal of two new species. J Clin Microbiol 43: 4930–4942

    Article  PubMed  CAS  Google Scholar 

  10. Gilgado F, Cano J, Gené J, et al. (2008) Molecular and phenotypic data supporting distinct species statuses for Scedosporium apiospermum and Pseudallescheria boydii and the proposed new species Scedosporium dehoogii. J Clin Microbiol 46: 766–771

    Article  PubMed  Google Scholar 

  11. Lackner M, Klaassen CH, Meis JF, et al. (2011) Molecular identification tools for sibling species of Scedosporium and Pseudallescheria. Med Mycol Oct 17

  12. Theel ES, Hall L, Mandrekar J, Wengenack NL (2011) Dermatophyte Identification Using Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry. J Clin Microbiol Sep 28

  13. Alanio A, Beretti JL, Dauphin B, et al. (2011) Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species. Clin Microbiol Infect 17: 750–755

    Article  PubMed  CAS  Google Scholar 

  14. De Carolis E, Posteraro B, Lass-Flörl C, et al. (2011) Species identification of Aspergillus, Fusarium and Mucorales with direct surface analysis by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin Microbiol Infect Jul 27

  15. Marinach-Patrice C, Lethuillier A, Marly A, et al. (2009) Use of mass spectrometry to identify clinical Fusarium isolates. Clin Microbiol Infect 15: 634–642

    Article  PubMed  CAS  Google Scholar 

  16. Hettick JM, Green BJ, Buskirk AD, et al. (2008) Discrimination of Aspergillus isolates at the species and strain level by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry fingerprinting. Anal Biochem 380: 276–281

    Article  PubMed  CAS  Google Scholar 

  17. Coulibaly O, Marinach-Patrice C, Cassagne C, et al. (2011) Pseudallescheria / Scedosporium complex species identification by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Med Mycol 49: 621–626

    PubMed  CAS  Google Scholar 

  18. Erhard M, Hipler UC, Burmester A, et al. (2008) Identification of dermatophyte species causing onychomycosis and tinea pedis by MALDI-TOF mass spectrometry. Exp Dermatol 17: 356–361

    Article  PubMed  Google Scholar 

  19. Alshawa K, Beretti J-L, Lacroix C, et al. (2010) Usefulness of MALDITOF-MS for routine identification of clinical dermatophyte isolates. ICAAC Boston

  20. Sitterlé E, Bouchara JP, Dauphin B, et al. (2011) Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Scedosporium species. Second Meeting of the ECMM/ISHAM Working Group Fungal respiratory infections in Cystic Fibrosis (Fri-CF) Angers (France)

  21. Bizzini A, Greub G (2010) Matrix-assisted laser desorption ionization time-of-flight mass spectrometry, a revolution in clinical microbial identification. Clin Microbiol Infect 16: 1614–1619

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. -É. Bougnoux.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Bougnoux, M.É., Lacroix, C., Hassouni, N. et al. Intérêt de la spectrométrie de masse de type MALDI-TOF pour l’identification des champignons filamenteux. Bio trib. mag. 40, 45–49 (2011). https://doi.org/10.1007/s11834-011-0064-6

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11834-011-0064-6

Mots-clés

Keywords

Navigation