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Distinct community assembly processes underlie significant spatiotemporal dynamics of abundant and rare bacterioplankton in the Yangtze River

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Abstract

The rare microbial biosphere provides broad ecological services and resilience to various ecosystems. Nevertheless, the biogeographical patterns and assembly processes of rare bacterioplankton communities in large rivers remain uncertain. In this study, we investigated the biogeography and community assembly processes of abundant and rare bacterioplankton taxa in the Yangtze River (China) covering a distance of 4300 km. The results revealed similar spatiotemporal patterns of abundant taxa (AT) and rare taxa (RT) at both taxonomic and phylogenetic levels, and analysis of similarities revealed that RT was significantly influenced by season and landform than AT. Furthermore, RT correlated with more environmental factors than AT, whereas environmental and spatial factors explained a lower proportion of community shifts in RT than in AT. The steeper distance-decay slopes in AT indicated higher spatial turnover rates of abundant subcommunities than rare subcommunities. The null model revealed that both AT and RT were mainly governed by stochastic processes. However, dispersal limitation primarily governed the AT, whereas the undominated process accounted for a higher fraction of stochastic processes in RT. River flow and suspended solids mediated the balance between the stochastic and deterministic processes in RT. The spatiotemporal dynamics and assembly processes of total taxa were more similar as AT than RT. This study provides new insights into both significant spatiotemporal dynamics and inconsistent assembly processes of AT and RT in large rivers.

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Acknowledgements

This work was supported by National Natural Science Foundation of China (Grant No. 41907203) and China Postdoctoral Science Foundation (2021T140010). Supports from High-performance Computing Platform of Peking University (China) and Majorbio Company (Shanghai, China) are acknowledged. The authors declared no competing financial interests.

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Authors and Affiliations

  1. College of Environmental Sciences and Engineering, Peking University, Key Laboratory of Water and Sediment Sciences (Ministry of Education), Beijing, 100871, China

    Malan Yi, Yao Fang, Shufeng Liu & Jinren Ni

  2. Fluid Science and Resources Division, Department of Chemical Engineering, The University of Western Australia, Crawley, WA, 6009, Australia

    Guoping Hu

  3. College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, 518060, China

    Tang Liu

  4. State Environmental Protection Key Laboratory of All Material Fluxes in River Ecosystems, Peking University, Beijing, 100871, China

    Tang Liu

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  1. Malan Yi
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  2. Yao Fang
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  3. Guoping Hu
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  4. Shufeng Liu
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  5. Jinren Ni
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  6. Tang Liu
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Correspondence to Tang Liu.

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Highlights

• Season and landform influenced spatiotemporal patterns of abundant and rare taxa.

• Different stochastic processes dominated abundant and rare subcommunity assembly.

• River flow and suspended solids regulated assembly processes of rare taxa.

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11783_2021_1513_MOESM1_ESM.pdf

Distinct community assembly processes underlie significant spatiotemporal dynamics of abundant and rare bacterioplankton in the Yangtze River

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Yi, M., Fang, Y., Hu, G. et al. Distinct community assembly processes underlie significant spatiotemporal dynamics of abundant and rare bacterioplankton in the Yangtze River. Front. Environ. Sci. Eng. 16, 79 (2022). https://doi.org/10.1007/s11783-021-1513-4

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