Skip to main content
Log in

Inferring community properties of benthic macroinvertebrates in streams using Shannon index and exergy

  • Research Article
  • Published:
Frontiers of Earth Science Aims and scope Submit manuscript

Abstract

Definition of ecological integrity based on community analysis has long been a critical issue in risk assessment for sustainable ecosystem management. In this work, two indices (i.e., Shannon index and exergy) were selected for the analysis of community properties of benthic macroinvertebrate community in streams in Korea. For this purpose, the means and variances of both indices were analyzed. The results found an extra scope of structural and functional properties in communities in response to environmental variabilities and anthropogenic disturbances. The combination of these two parameters (four indices) was feasible in identification of disturbance agents (e.g., industrial pollution or organic pollution) and specifying states of communities. The four-aforementioned parameters (means and variances of Shannon index and exergy) were further used as input data in a self-organizing map for the characterization of water quality. Our results suggested that Shannon index and exergy in combination could be utilized as a suitable reference system and would be an efficient tool for assessment of the health of aquatic ecosystems exposed to environmental disturbances.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Armitage P D, Moss D, Wright J F, Furse M T (1983). The performance of a new biological water quality score system based on macroinvertebrates over a wide range of unpolluted running-water sites. Water Res, 17(3): 333–347

    Article  Google Scholar 

  • Bae M J, Li F, Verdonschot P F M, Park Y S (2013). Characterization of ecological exergy based on benthic macroinvertebrates in lotic ecosystems. Entropy, 15(6): 2319–2339

    Article  Google Scholar 

  • Barbour M T, Gerritsen J, Griffith G E, Frydenborg R, McCarron E, White J S, Bastian M L (1996). A framework for biological criteria for Florida streams using benthic macroinvertebrates. J N Am Benthol Soc, 15(2): 185–211

    Article  Google Scholar 

  • Bastianoni S, Facchini A, Susani L, Tiezzi E (2007). Emergy as a function of exergy. Energy, 32(7): 1158–1162

    Article  Google Scholar 

  • Bendoricchio G, Jørgensen S E (1997). Exergy as goal function of ecosystems dynamic. Ecol Modell, 102(1): 5–15

    Article  Google Scholar 

  • Benedetti-Cecchi L (2003). The importance of the variance around the mean effect size of ecological processes. Ecology, 84(9): 2335–2346

    Article  Google Scholar 

  • Blocksom K A, Kurtenbach J P, Klemm D J, Fulk F A, Cormier S M (2002). Development and evaluation of the lake macroinvertebrate integrity index (LMII) for New Jersey lakes and reservoirs. Environ Monit Assess, 77(3): 311–333

    Article  Google Scholar 

  • Chao A, Shen T J (2003). Nonparametric estimation of Shannon’s index of diversity when there are unseen species in sample. Environ Ecol Stat, 10(4): 429–443

    Article  Google Scholar 

  • Chon T S (2011). Self-organizing maps applied to ecological sciences. Ecol Inform, 6(1): 50–61

    Article  Google Scholar 

  • Chon T S, Qu X, Cho W S, Hwang H J, Tang H, Liu Y, Choi J H, Jung M, Chung B S, Lee H Y, Chung Y R, Koh S C (2013). Evaluation of stream ecosystem health and species association based on multi-taxa (benthic macroinvertebrates, algae, and microorganisms) patterning with different levels of pollution. Ecol Inform, 17: 58–72

    Article  Google Scholar 

  • Dai J, Fath B, Chen B (2012). Constructing a network of the socialeconomic consumption system of China using extended exergy analysis. Renew Sustain Energy Rev, 16(7): 4796–4808

    Article  Google Scholar 

  • Greene W H (2003). Econometric Analysis (5th ed). New Jersey: Pearson Education, Inc., 958pp

    Google Scholar 

  • Hellawell J M (1986). Biological Indicators of Freshwater Pollution and Environmental Management. London and New York: Elsevier Applied Science Publishers, 546 pp

    Book  Google Scholar 

  • Herendeen R (1989). Energy intensity, residence time, exergy, and ascendency in dynamic ecosystems. Ecol Modell, 48(1–2): 19–44

    Article  Google Scholar 

  • Hering D, Feld C, Moog O, Ofenböck T (2006). Cook book for the development of a multimetric index for biological condition of aquatic ecosystems: experiences from the European AQEM and STAR projects and related initiatives. Hydrobiologia, 566(1): 311–324

    Article  Google Scholar 

  • Hilsenhoff W L (1987). An improved biotic index of organic stream pollution. Great Lakes Entomol, 20: 31–39

    Google Scholar 

  • Inouye B D (2005). The importance of the variance around the mean effect size of ecological processes. Ecology, 86(1): 262–265 (comment)

    Article  Google Scholar 

  • Jørgensen S E (1992). The shifts in species composition and ecological modelling in hydrobiology. Hydrobiologia, 239(2): 115–129

    Article  Google Scholar 

  • Jørgensen S E, Fath B D (2004). Application of thermodynamic principles in ecology. Ecol Complex, 1(4): 267–280

    Article  Google Scholar 

  • Jørgensen S E, Ladegaard N, Debeljak M, Marques J C (2005a). Calculations of exergy for organisms. Ecol Modell, 185(2–4): 165–175

    Article  Google Scholar 

  • Jørgensen S E, Nielsen S N, Mejer H (1995). Emergy, environ, exergy and ecological modelling. Ecol Modell, 77(2–3): 99–109

    Article  Google Scholar 

  • Jørgensen S E, Nors Nielsen S (2007). Application of exergy as thermodynamic indicator in ecology. Energy, 32(5): 673–685

    Article  Google Scholar 

  • Jørgensen S E, Odum H T, Brown M T (2004). Emergy and exergy stored in genetic information. Ecol Modell, 178(1–2): 11–16

    Article  Google Scholar 

  • Jørgensen S E, Xu F L, Salas F, Marques J (2005b). Application of indicators for the assessment of ecosystem health. In: Jørgensen S E, Costanza R, Xu F L, eds. Handbook of Ecological Indicators for Assessment of Ecosystem Health. Florida: CRC Press, 464pp

    Chapter  Google Scholar 

  • Kohonen T (1988). Self-organization and Associative Memory. New York: Springer-Verlag Berlin Heidelberg New York, Inc., 332pp

    Book  Google Scholar 

  • Lenat D R (1988). Water quality assessment of streams using a qualitative collection method for benthic macroinvertebrates. J N Am Benthol Soc, 7(3): 222–233

    Article  Google Scholar 

  • Li F, Bae M J, Kwon Y S, Chung N, Hwang S J, Park S J, Park H K, Kong D S, Park Y S (2013). Ecological exergy as an indicator of land-use impacts on functional guilds in river ecosystems. Ecol Modell, 252: 53–62

    Article  Google Scholar 

  • Libralato S, Torricelli P, Pranovi F (2006). Exergy as ecosystem indicator: an application to the recovery process of marine benthic communities. Ecol Modell, 192(3–4): 571–585

    Article  Google Scholar 

  • Link W A, Nichols J D (1994). On the importance of sampling variance to investigations of temporal variation in animal population size. Oikos, 69(3): 539–544

    Article  Google Scholar 

  • Magurran A E (2004). Measuring Biological Diversity. Oxford: Blackwell Publishing, 264pp

    Google Scholar 

  • Marchi M, Jørgensen S E, Bécares E, Fernández-Aláez C, Rodríguez C, Fernández-Aláez M, Pulselli F M, Marchettini N, Bastianoni S (2012). Effects of eutrophication and exotic crayfish on health status of two Spanish lakes: a joint application of ecological indicators. Ecol Indic, 20: 92–100

    Article  Google Scholar 

  • Mejer H, Jørgensen S E (1979). Energy and ecological buffer capacity. In: State-of-the-Art of Ecological Modelling. Proceeding of the conference on ecological modeling, Copenhagen, Denmark, 829–846

    Google Scholar 

  • Nayak T K (1985). On diversity measures based on entropy functions. Communication in Statistics—Theory and Methods, 141(1): 203–215

    Google Scholar 

  • Niemi G J, McDonald M E (2004). Application of ecological indicators. Annu Rev Ecol Evol Syst, 35(1): 89–111

    Article  Google Scholar 

  • Odum H T (1988). Self-organization, transformity, and information. Science, 242(4882): 1132–1139

    Article  Google Scholar 

  • Osborne L L, Davies R W, Linton K J (1980). Use of hierarchical diversity indices in lotic community analysis. J Appl Ecol, 17(3): 567–580

    Article  Google Scholar 

  • Park Y S, Céréghino R, Compin A, Lek S (2003). Applications of artificial neural networks for patterning and predicting aquatic insect species richness in running waters. Ecol Modell, 160(3): 265–280

    Article  Google Scholar 

  • Park Y S, Kwak I S, Chon T S, Kim J K, Jørgensen S E (2001). Implementation of artificial neural networks in patterning and prediction of exergy in response to temporal dynamics of benthic macroinvertebrate communities in streams. Ecol Modell, 146(1–3): 143–157

    Article  Google Scholar 

  • Park Y S, Lek S, Scardi M, Verdonschot P F M, Jørgensen S E (2006a). Patterning exergy of benthic macroinvertebrate communities using self-organizing maps. Ecol Modell, 195(1–2): 105–113

    Article  Google Scholar 

  • Park Y S, Song M Y, Park Y C, Oh K H, Cho E, Chon T S (2007). Community patterns of benthic macroinvertebrates collected on the national scale in Korea. Ecol Modell, 203(1–2): 26–33

    Article  Google Scholar 

  • Park Y S, Tison J, Lek S, Giraudel J L, Coste M, Delmas F (2006b). Application of a self-organizing map to select representative species in multivariate analysis: a case study determining diatom distribution patterns across France. Ecol Inform, 1(3): 247–257

    Article  Google Scholar 

  • Pielou E C (1977). Mathematical Ecology. New York-London-Sydney-Toronto: John Wiley and Sons, 385pp

    Google Scholar 

  • Pusceddu A, Danovaro R (2009). Exergy, ecosystem functioning and efficiency in a coastal lagoon: the role of auxiliary energy. Estuar Coast Shelf Sci, 84(2): 227–236

    Article  Google Scholar 

  • Qu X D, Song M Y, Park Y S, Oh Y N, Chon T S (2008). Species abundance patterns of benthic macroinvertebrate communities in polluted streams. Ann Limnol-Int J Lim, 44(2): 119–133

    Article  Google Scholar 

  • Ramezani H, Holm S, Allard A, Ståhl G (2010). Monitoring landscape metrics by point sampling: accuracy in estimating Shannon’s diversity and edge density. Environ Monit Assess, 164(1–4): 403–421 PMID:19415517

    Article  Google Scholar 

  • Reynoldson T B, Norris R H, Resh V H, Day K E, Rosenberg D M (1997). The reference condition: a comparison of multimetric and multivariate approaches to assess water-quality impairment using benthic macroinvertebrates. J N Am Benthol Soc, 16(4): 833–852

    Article  Google Scholar 

  • Shannon C E (1948). A mathematical theory of communication. Bell Syst Tech J, 27(3): 379–423

    Article  Google Scholar 

  • Silow E A, Mokry A V (2010). Exergy as a tool for ecosystem health assessment. Entropy, 12(4): 902–925

    Article  Google Scholar 

  • Silow E A, In-Hye O (2004). Aquatic ecosystem assessment using exergy. Ecol Indic, 4(3): 189–198

    Article  Google Scholar 

  • Song M Y, Hwang H J, Kwak I S, Ji C W, Oh Y N, Youn B J, Chon T S (2007). Self-organizing mapping of benthic macroinvertebrate communities implemented to community assessment and water quality evaluation. Ecol Modell, 203(1–2): 18–25

    Article  Google Scholar 

  • Straškraba M, Jørgensen S E, Patten B C (1999). Ecosystems emerging: 2. Dissipation. Ecol Modell, 117(1): 3–39

    Article  Google Scholar 

  • Suzuki M, Sagehashi M, Sakoda A (2000). Modelling the structural dynamics of a shallow and eutrophic water ecosystem based on mesocosm observations. Ecol Modell, 128(2–3): 221–243

    Article  Google Scholar 

  • Svirezhev Y M (2000). Thermodynamics and ecology. Ecol Modell, 132(1–2): 11–22

    Article  Google Scholar 

  • Svirezhev Y M, Steinborn W H, Pomaz V L (2003). Exergy of solar radiation: global scale. Ecol Modell, 169(2–3): 339–346

    Article  Google Scholar 

  • Tang H, Song M Y, Cho W S, Park Y S, Chon T S (2010). Species abundance distribution of benthic chironomids and other macroinvertebrates across different levels of pollution in streams. Ann Limnol-Int J Lim, 46(1): 53–66

    Article  Google Scholar 

  • Ward J H Jr (1963). Hierarchical grouping to optimize an objective function. J Am Stat Assoc, 58(301): 236–244

    Article  Google Scholar 

  • Xu F L, Jørgensen S E, Tao S (1999). Ecological indicators for assessing freshwater ecosystem health. Ecol Modell, 116(1): 77–106

    Article  Google Scholar 

  • Xu F L, Wang J J, Chen B, Qin N, Wu W J, He W, Wang Y (2011). The variations of exergies and structural exergies along eutrophication gradients in Chinese and Italian lakes. Wetlands in China, 222(2): 337–350

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tae-Soo Chon.

Additional information

Tuyen Van Nguyen received his Bachelor’s degree in Theoretical Physics from the Honors Program for Talented Students of Hanoi National University of Education in 2006. He then completed the Master’s Program in Mathematical Ecology at the Department of Biological Sciences of Pusan National University (PNU) in 2009. In 2011, he attended a three-month summer program at the International Institute for Applied System Analysis (IIASA). He is currently a Ph.D candidate at the Department of Mathematics, PNU. His scientific interests include the development of spatially explicit models, eco-evolutionary individual-based simulation, hidden Markov models, and the application of statistical physics to analysis of macroinvertebrate behavioral and ecological data.

Woon-Seok Cho completed his M.S. at the Department of Biological Sciences, PNU. He is currently a Ph.D candidate at the Department of Biological Sciences, PNU. He has published three scientific papers as first author and four as a co-author. His scientific interests include development of individual-based models to address the individual-population-community relationship and analysis of community data by using self-organizing map (SOM) and speciesabundance distribution in response to natural and anthropogenic variability.

Hungsoo Kim earned his Ph.D in theoretical physics from the Korea Advanced Institute of Science and Technology (KAIST) in 1999. He published several papers in the field of quantum information and statistical physics. He is currently involved in analysis of complex ecological data and application of the computational method to adaptive dynamics in behavior and ecology. His scientific interests include statistical physics applied to the hidden Markov model, stochastic processes, and development of biologically inspired machine learning.

Il Hyo Jung earned his Ph.D in mathematics from the KAIST, Korea, in 1997. His major fields include applied analysis, partial differential equations, ordinary differential equations, and mathematical biology. He has published about 40 scientific papers as first and co-author. He is currently a Professor and Director of the Institute of Mathematical Sciences at the Department of Mathematics, PNU.

YongKuk Kim is a Professor in mathematics at Kyungpook National University. He obtained his M.S. degree from Pusan National University in 1991. Additionally, he received his Ph.D from the University of Tennessee, Knoxville in 1998. His research interests include mathematical modeling and computation in biosciences; specifically, epidemiology and medical problems. He has been involved in collaborative research with the Korean Control Diseases and Prevention Center for development of epidemic models in Korea.

Tae-Soo Chon earned his Ph.D from the University of Hawaii at Manoa in 1982 and has been a Professor of Ecology and Behavior Systems, Department of Biological Sciences, PNU, since 1983. He held a 1989 research fellowship on artificial neural networks supported by the National Science Foundation, USA, at the Department of Biomedical Engineering, Rutgers University, USA. He has been involved in interdisciplinary studies covering ecology/behavior, mathematical biology, and electrical engineering. He has published more than 120 papers on biologically-inspired computational methods applied to ecological data, individual based models for movement and dispersal, pattern recognition, and detection of response behaviors of indicator species for water quality monitoring. He served as the first president of the Korean Society for Mathematical Biology from 2005 to 2007. He currently serves an associate editor of Ecological Informatics and is a member of the editorial advisory board for Ecological Modelling, International Journal of Limnology, and Encyclopedia of Ecology.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Nguyen, T.V., Cho, WS., Kim, H. et al. Inferring community properties of benthic macroinvertebrates in streams using Shannon index and exergy. Front. Earth Sci. 8, 44–57 (2014). https://doi.org/10.1007/s11707-013-0420-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11707-013-0420-9

Keywords

Navigation