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Robust multi-label transfer feature learning for early diagnosis of Alzheimer’s disease

  • Bo Cheng
  • Mingxia Liu
  • Daoqiang Zhang
  • Dinggang Shen
  • Alzheimer’s Disease Neuroimaging Initiative
ORIGINAL RESEARCH

Abstract

Transfer learning has been successfully used in the early diagnosis of Alzheimer’s disease (AD). In these methods, data from one single or multiple related source domain(s) are employed to aid the learning task in the target domain. However, most of the existing methods utilize data from all source domains, ignoring the fact that unrelated source domains may degrade the learning performance. Also, previous studies assume that class labels for all subjects are reliable, without considering the ambiguity of class labels caused by slight differences between early AD patients and normal control subjects. To address these issues, we propose to transform the original binary class label of a particular subject into a multi-bit label coding vector with the aid of multiple source domains. We further develop a robust multi-label transfer feature learning (rMLTFL) model to simultaneously capture a common set of features from different domains (including the target domain and all source domains) and to identify the unrelated source domains. We evaluate our method on 406 subjects from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database with baseline magnetic resonance imaging (MRI) and cerebrospinal fluid (CSF) data. The experimental results show that the proposed rMLTFL method can effectively improve the performance of AD diagnosis, compared with several state-of-the-art methods.

Keywords

Transfer learning Multi-label learning Feature learning Alzheimer’s disease (AD) 

Notes

Acknowledgements

Data collection and sharing for this project was funded by the Alzheimer’s Disease Neuroimaging Initiative (ADNI) (National Institutes of Health Grant U01 AG024904). ADNI is funded by the National Institute on Aging, the National Institute of Biomedical Imaging and Bioengineering, and through generous contributions from the following: Abbott, AstraZeneca AB, Bayer Schering Pharma AG, Bristol-Myers Squibb, Eisai Global Clinical Development, Elan Corporation, Genentech, GE Healthcare, GlaxoSmithKline, Innogenetics, Johnson and Johnson, Eli Lilly and Co., Medpace, Inc., Merck and Co., Inc., Novartis AG, Pfizer Inc, F. Hoffman-La Roche, Schering-Plough, Synarc, Inc., as well as non-profit partners the Alzheimer’s Association and Alzheimer’s Drug Discovery Foundation, with participation from the U.S. Food and Drug Administration. Private sector contributions to ADNI are facilitated by the Foundation for the National Institutes of Health (http://www.fnih.org). The grantee organization is the Northern California Institute for Research and Education, and the study is coordinated by the Alzheimer’s Disease Cooperative Study at the University of California, San Diego. ADNI data are disseminated by the Laboratory for Neuron Imaging at the University of California, Los Angeles. This work was supported by the National Natural Science Foundation of China (Nos. 61602072, 61573023, 61732006, and 61473149), Chongqing Cutting-edge and Applied Foundation Research Program (Grant No. cstc2016jcyjA0063), Scientific and Technological Research Program of Chongqing Municipal Education Commission (Grant Nos. KJ1401010, KJ1601003, KJ1601015, KJ1710248, KJ1710257), NIH grants (AG041721, AG049371, AG042599, AG053867), Key Laboratory of Chongqing Municipal Institutions of Higher Education (Grant No. [2017]3), and Program of Chongqing Development and Reform Commission (Grant No. 2017[1007]).

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Authors and Affiliations

  • Bo Cheng
    • 1
    • 2
  • Mingxia Liu
    • 3
  • Daoqiang Zhang
    • 4
  • Dinggang Shen
    • 3
    • 5
  • Alzheimer’s Disease Neuroimaging Initiative
  1. 1.Key Laboratory of Intelligent Information Processing and Control of Chongqing Municipal Institutions of Higher EducationChongqing Three Gorges UniversityChongqingChina
  2. 2.Chongqing Engineering Research Center of Internet of Things and Intelligent Control TechnologyChongqing Three Gorges UniversityChongqingChina
  3. 3.Department of Radiology and BRICUniversity of North CarolinaChapel HillUSA
  4. 4.Department of Computer Science and EngineeringNanjing University of Aeronautics and AstronauticsNanjingChina
  5. 5.Department of Brain and Cognitive EngineeringKorea UniversitySeoulRepublic of Korea

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