Skip to main content
Log in

Answering six questions in extracting children’s mismatch negativity through combining wavelet decomposition and independent component analysis

  • Research Article
  • Published:
Cognitive Neurodynamics Aims and scope Submit manuscript

Abstract

This study combines wavelet decomposition and independent component analysis (ICA) to extract mismatch negativity (MMN) from electroencephalography (EEG) recordings. As MMN is a small event-related potential (ERP), a systematic ICA based approach is designed, exploiting MMN’s temporal, frequency and spatial information. Moreover, this study answers which type of EEG recordings is more appropriate for ICA to extract MMN, what kind of the preprocessing is beneficial for ICA decomposition, which algorithm of ICA can be chosen to decompose EEG recordings under the selected type, how to determine the desired independent component extracted by ICA, how to improve the accuracy of the back projection of the selected independent component in the electrode field, and what can be finally obtained with the application of ICA. Results showed that the proposed method extracted MMN with better properties than those estimated by difference wave only using temporal information or ICA only using spatial information. The better properties mean that the deviant with larger magnitude of deviance to repeated stimuli in the oddball paradigm can elicit MMN with larger peak amplitude and shorter latency. As other ERPs also have the similar information exploited here, the proposed method can be used to study other ERPs.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Basar E, Schurmann M, Demiralp T, Basar-Eroglu C, Ademoglu A (2001) Event-related oscillations are ‘real brain responses’—wavelet analysis and new strategies. Int J Psychophysiol 39:91–127

    Article  PubMed  CAS  Google Scholar 

  • Chen Z, Cao J, Cao Y, Zhang Y, Gu F, Zhu G, Hong Z, Wang B, Cichocki A (2008) An empirical EEG analysis in brain death diagnosis for adults. Cogn Neurodyn 2:257–271

    Article  PubMed  Google Scholar 

  • Cichocki A, Amari S (2003) Adaptive blind signal and image processing: learning algorithms and applications. Wiley, Chichester

    Google Scholar 

  • Cong F, Sipola T, Huttunen-Scott T, Xu X, Ristaniemi T, Lyytinen H (2009) Hilbert-Huang versus Morlet wavelet transformation on mismatch negativity of children in uninterrupted sound paradigm. Nonlinear Biomed Phys 3:1

    Article  PubMed  Google Scholar 

  • Cong F, Kalyakin I, Huang Y, Huttunen-Scott T, Li H, Lyytinen H, Ristaniemi T (2010a) Frequency response based wavelet decomposition to extract mismatch negativity of children. No.B8/2010, Series B. Scientific Computing: Reports of Department Mathematical Information Technology, University of Jyväskylä, Finland. http://users.jyu.fi/~fecong/TechnicalReport.html

  • Cong F, Kalyakin I, Phan AH, Cichocki A, Huttunen-Scott T, Lyytinen H,Ristaniemi T (2010b) Extract mismatch negativity and P3a through two-dimensional nonnegative decomposition on time-frequency represented event-related potentials. In: Zhang L, Kwok J, Lu B-L (eds) ISNN 2010, Part II. Lect Notes Comput Sci 6064:385–391

  • Cong F, Kalyakin I, Ristaniemi T (2010c) Can back-projection fully resolve polarity indeterminacy of ICA in study of ERP? Biomed Signal Process Control. doi:10.1016/j.bspc.2010.05.006

  • Cong F, Phan AH, Cichocki A, Lyytinen H, Ristaniemi T (2010d) Identical fits of nonnegative matrix/tensor factorization may correspond to different extracted event-related potentials. In: Proceedings of international joint conference on neural networks 2010 (IEEE world congress on computational intelligence 2010), pp 2260–2264

  • Cong F, Leppänen PHT, Astikainen P, Hämäläinen J, Hietanen JK,Ristaniemi T (2011) Dimension reduction: additional benefit of an optimal filter for independent component analysis to extract event-related potentials. No. B4/2011, Series B. Scientific Computing: Reports of Department Mathematical Information Technology, University of Jyväskylä, Finland. http://users.jyu.fi/~fecong/TechnicalReport.html

  • Daubechies I, Roussos E, Takerkart S, Benharrosh M, Golden C, D’Ardenne K, Richter W, Cohen JD, Haxby J (2009) Independent component analysis for brain fMRI does not select for independence. Proc Natl Acad Sci USA 106:10415–10422

    Article  PubMed  CAS  Google Scholar 

  • Delorme A, Makeig S (2004) EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis. J Neurosci Methods 134:9–21

    Article  PubMed  Google Scholar 

  • Duncan CC, Barry RJ, Connolly JF, Fischer C, Michie PT, Näätänen R, Polich J, Reinvang I, Van Petten C (2009) Event-related potentials in clinical research: guidelines for eliciting, recording, and quantifying mismatch negativity, P300, and N400. Clin Neurophysiol 120:1883–1908

    Article  PubMed  Google Scholar 

  • Garrido MI, Kilner JM, Stephan KE, Friston KJ (2009) The mismatch negativity: a review of underlying mechanisms. Clin Neurophysiol 120:453–463

    Article  PubMed  Google Scholar 

  • Görsev GY, Basar E (2010) Sensory evoked and event related oscillations in Alzheimer’s disease: a short review. Cogn Neurodyn 4:263–274

    Article  Google Scholar 

  • Hämäläinen M, Hari R, Ilmoniemi R, Knuutila J, Lounasmaa O (1993) Magnetoencephalography—theory, instrumentation, and applications to noninvasive studies of the working human brain. Rev Mod Phys 65:413–497

    Article  Google Scholar 

  • Harmony T (1984) Neurometric assessment of brain dysfunction in neurological patients: functional neuroscience. Lawrence Erlbaum Associates Publishers, Hillsdale, NJ

    Google Scholar 

  • Himberg J, Hyvarinen A, Esposito F (2004) Validating the independent components of neuroimaging time series via clustering and visualization. Neuroimage 22:1214–1222

    Article  PubMed  Google Scholar 

  • Huovinen T, Ristaniemi (2006) Independent component analysis using successive interference cancellation for oversaturated data. Eur Trans Telecomm 17:577–589

  • Huttunen T, Halonen A, Kaartinen J, Lyytinen H (2007) Does mismatch negativity show differences in reading-disabled children compared to normal children and children with attention deficit? Dev Neuropsychol 31:453–470

    Article  PubMed  Google Scholar 

  • Huttunen-Scott T, Kaartinen J, Tolvanen A, Lyytinen H (2008) Mismatch negativity (MMN) elicited by duration deviations in children with reading disorder, attention deficit or both. Int J Psychophysiol 69:69–77

    Article  PubMed  Google Scholar 

  • Hyvarinen A (1999) Fast and robust fixed-point algorithms for independent component analysis. IEEE Trans Neural Netw 10:626–634

    Article  PubMed  CAS  Google Scholar 

  • Hyvarinen A, Karhunen J, Oja E (2001) Independent component analysis. Wiley, New York

    Book  Google Scholar 

  • Iyer D, Zouridakis G (2007) Single-trial evoked potential estimation: comparison between independent component analysis and wavelet denoising. Clin Neurophysiol 118:495–504

    Article  PubMed  Google Scholar 

  • Kalyakin I, Gonzalez N, Joutsensalo J, Huttunen T, Kaartinen J, Lyytinen H (2007) Optimal digital filtering versus difference waves on the mismatch negativity in an uninterrupted sound paradigm. Dev Neuropsychol 31:429–452

    Article  PubMed  Google Scholar 

  • Kalyakin I, Gonzalez N, Karkkainen T, Lyytinen H (2008) Independent component analysis on the mismatch negativity in an uninterrupted sound paradigm. J Neurosci Methods 174:301–312

    Article  PubMed  Google Scholar 

  • Kalyakin I, Gonzalez M, Ivannikov I, Lyytinen H (2009) Extraction of the mismatch negativity elicited by sound duration decrements: a comparison of three procedures. Data Knowl Eng 68:1411–1426

    Article  Google Scholar 

  • Koldovský Z, Tichavský P (2011) Time-domain blind separation of audio sources on the basis of a complete ICA decomposition of an observation space. IEEE Trans Audio Speech Lang Process 19:406–416

    Article  Google Scholar 

  • Koldovsky Z, Tichavsky P, Oja E (2006) Efficient variant of algorithm FastICA for independent component analysis attaining the Cramer-Rao lower bound. IEEE Trans Neural Netw 17:1265–1277

    Article  PubMed  Google Scholar 

  • Koldovský Z, Málek J, Tichavský P, Deville Y, Hosseini S (2009) Blind separation of piecewise stationary non-Gaussian sources. Signal Process 89:2570–2584

    Article  Google Scholar 

  • Lee TW, Girolami M, Sejnowski TJ (1999) Independent component analysis using an extended infomax algorithm for mixed SubGaussian and SuperGaussian sources. Neural Comput 11:417–441

    Article  PubMed  CAS  Google Scholar 

  • Makeig S (2002) Frequently asked questions about ICA applied to EEG and MEG data. http://www.sccn.ucsd.edu/~scott/icafaq.html. Swartz Center for Computational Neuroscience, Institute for Neural Computation, University of California, San Diego

  • Makeig S, Jung TP, Bell AJ, Ghahremani D, Sejnowski TJ (1997) Blind separation of auditory event-related brain responses into independent components. Proc Natl Acad Sci USA 94:10979–10984

    Article  PubMed  CAS  Google Scholar 

  • Makeig S, Westerfield M, Jung TP, Covington J, Townsend J, Sejnowski TJ, Courchesne E (1999) Functionally independent components of the late positive event-related potential during visual spatial attention. J Neurosci 19:2665–2680

    PubMed  CAS  Google Scholar 

  • Marco-Pallares J, Grau C, Ruffini G (2005) Combined ICA-LORETA analysis of mismatch negativity. Neuroimage 25:471–477

    Article  PubMed  CAS  Google Scholar 

  • Näätänen R (1992) Attention and brain functions. Lawrence Erlbaum Associates, Hillsdale, NJ

    Google Scholar 

  • Näätänen R, Gaillard AW, Mantysalo S (1978) Early selective-attention effect on evoked potential reinterpreted. Acta Psychol (Amst) 42:313–329

    Article  Google Scholar 

  • Nunez P, Srinivasan R (2005) Electric fields of the brain: the neurophysics of EEG. Oxford University Press, New York

    Google Scholar 

  • Picton TW, Bentin S, Berg P, Donchin E, Hillyard SA, Johnson R Jr, Miller GA, Ritter W, Ruchkin DS, Rugg MD, Taylor MJ (2000) Guidelines for using human event-related potentials to study cognition: recording standards and publication criteria. Psychophysiology 37:127–152

    Article  PubMed  CAS  Google Scholar 

  • Pockett S, Whalen S, McPhail AV, Freeman WJ (2007) Topography, independent component analysis and dipole source analysis of movement related potentials. Cogn Neurodyn 1:327–340

    Article  PubMed  Google Scholar 

  • Sinkkonen J, Tervaniemi M (2000) Towards optimal recording and analysis of the mismatch negativity. Audiol Neurootol 5:235–246

    Article  PubMed  CAS  Google Scholar 

  • Tichavský P, Koldovský Z (2011) Weight adjusted tensor method for blind separation of underdetermined mixtures of nonstationary sources. IEEE Trans Signal Process 59:1037–1047

    Article  Google Scholar 

  • Tichavsky P, Yeredor A (2009) Fast approximate joint diagonalization incorporating weight matrices. IEEE Trans Signal Process 57:878–891

    Article  Google Scholar 

  • Tichavsky P, Koldovsky Z, Yeredor A, Gomez-Herrero G, Doron E (2008) A hybrid technique for blind separation of non-Gaussian and time-correlated sources using a multicomponent approach. IEEE Trans Neural Netw 19:421–430

    Article  PubMed  Google Scholar 

  • Tie Y, Whalen S, Suarez RO, Golby AJ (2008) Group independent component analysis of language fMRI from word generation tasks. Neuroimage 42:1214–1225

    Article  PubMed  Google Scholar 

  • Vigario R, Oja E (2008) BSS and ICA in neuroinformatics: from current practices to open challenges. IEEE Rev Biomed Eng 1:50–61

    Article  Google Scholar 

Download references

Acknowledgments

The first and second authors gratefully thank COMAS, a postgraduate school in computing and mathematical sciences offered by the University of Jyväskylä, Finland, for supporting this study. Cong F is also grateful to professor Amir Averbuch for his invaluable suggestions on wavelet analysis.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Fengyu Cong.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Cong, F., Kalyakin, I., Li, H. et al. Answering six questions in extracting children’s mismatch negativity through combining wavelet decomposition and independent component analysis. Cogn Neurodyn 5, 343–359 (2011). https://doi.org/10.1007/s11571-011-9161-1

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11571-011-9161-1

Keywords

Navigation