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Rigorous Mapping of Data to Qualitative Properties of Parameter Values and Dynamics: A Case Study on a Two-Variable Lotka–Volterra System

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Abstract

In this work, we describe mostly analytical work related to a novel approach to parameter identification for a two-variable Lotka–Volterra (LV) system. Specifically, this approach is qualitative, in that we aim not to determine precise values of model parameters but rather to establish relationships among these parameter values and properties of the trajectories that they generate, based on a small number of available data points. In this vein, we prove a variety of results about the existence, uniqueness, and signs of model parameters for which the trajectory of the system passes exactly through a set of three given data points, representing the smallest possible data set needed for identification of model parameter values. We find that in most situations such a data set determines these values uniquely; we also thoroughly investigate the alternative cases, which result in nonuniqueness or even nonexistence of model parameter values that fit the data. In addition to results about identifiability, our analysis provides information about the long-term dynamics of solutions of the LV system directly from the data without the necessity of estimating specific parameter values.

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References

  • Aster RC, Borchers B, Thurber CH (2018) Parameter estimation and inverse problems. Elsevier, Amsterdam

    MATH  Google Scholar 

  • Broomhead DS, King GP (1986) Extracting qualitative dynamics from experimental data. Physica D 20(2–3):217–236

    Article  MathSciNet  MATH  Google Scholar 

  • Calvetti D, and Somersalo E (2007) An introduction to bayesian scientific computing: ten lectures on subjective computing (Vol. 2). Springer Science & Business Media

  • Calvetti D, Somersalo E (2018) Inverse problems: from regularization to Bayesian inference. Wiley Interdiscip Rev Comput Stat 10(3):e1427

    Article  MathSciNet  Google Scholar 

  • Cao J, Wang L, Xu J (2011) Robust estimation for ordinary differential equation models. Biometrics 67(4):1305–1313

    Article  MathSciNet  MATH  Google Scholar 

  • Dalgaard P, and Larsen M (1990) Fitting numerical solutions of differential equations to experimental data: a case study and some general remarks. Biometrics, 1097–1109

  • Duan X, Rubin J, Swigon D (2020) Identification of affine dynamical systems from a single trajectory. Inverse Prob 36(8):085004

    Article  MathSciNet  MATH  Google Scholar 

  • Duan X, Rubin JE, Swigon D (2023) Qualitative inverse problems: mapping data to the features of trajectories and parameter values of an ODE model. Inverse Prob, 39:075002

  • Evensen G (2009) Data assimilation: the ensemble kalman filter. Springer Science & Business Media

  • Fort H (2018) On predicting species yields in multispecies communities: quantifying the accuracy of the linear Lotka-Volterra generalized model. Ecol Modell 387:154–162

    Article  Google Scholar 

  • Khan T, Chaudhary H (2020) Estimation and identifiability of parameters for generalized Lotka-Volterra biological systems using adaptive controlled combination difference anti-synchronization. Differ Eq Dyn Syst 28(3):515–526

    Article  MathSciNet  MATH  Google Scholar 

  • Kloppers P, Greeff J (2013) Lotka-Volterra model parameter estimation using experiential data. App Math Comput 224:817–825

    Article  MathSciNet  MATH  Google Scholar 

  • Kunze H, Hicken J, Vrscay E (2004) Inverse problems for odes using contraction maps and suboptimality of the? Collage method? Inverse Probl 20(3):977

    Article  MathSciNet  MATH  Google Scholar 

  • Lazzus JA, Vega-Jorquera P, Lopez-Caraballo CH, Palma-Chilla L, Salfate I (2020) Parameter estimation of a generalized Lotka-Volterra system using a modified PSO algorithm. Appl Soft Comput 96:106606

    Article  Google Scholar 

  • MacKay RS, Meiss JD (2020) Hamiltonian dynamical systems: a reprint selection. CRC Press, Boca Raton, FL

    Book  MATH  Google Scholar 

  • May RM (ed) (1976) Theoretical ecology: principles and applications. Elsevier - Health Sciences Division, Amsterdam

    Google Scholar 

  • Meshkat N, Sullivant S, Eisenberg M (2015) Identifiability results for several classes of linear compartment models. Bull Math Biol 77(8):1620–1651

    Article  MathSciNet  MATH  Google Scholar 

  • Packard NH, Crutchfield JP, Farmer JD, Shaw RS (1980) Geometry from a time series Geometry from a time series. Phys Rev Lett 45(9):712

    Article  Google Scholar 

  • Perko L (2013) Differential equations and dynamical systems, vol 7. Springer Science & Business Media, New York, NY

    MATH  Google Scholar 

  • Ramsay JO, Hooker G, Campbell D, Cao J (2007) Parameter estimation for differential equations: a generalized smoothing approach. J Royal Stat Soci Series B (Stat Methodol) 69(5):741–796

    Article  MathSciNet  MATH  Google Scholar 

  • Smith RC (2013) Uncertainty quantification: theory, implementation, and applications, vol 12. SIAM, Philadelphia, PA

    Google Scholar 

  • Stanhope S, Rubin J, Swigon D (2014) Identifiability of linear and linear-in-parameters dynamical systems from a single trajectory. SIAM J Appl Dyn Syst 13(4):1792–1815

    Article  MathSciNet  MATH  Google Scholar 

  • Stanhope S, Rubin J, Swigon D (2017) Robustness of solutions of the inverse problem for linear dynamical systems with uncertain data. SIAM/ASA J Uncertain Quantif 5(1):572–597

    Article  MathSciNet  MATH  Google Scholar 

  • Stuart AM (2010) Inverse problems: a Bayesian perspective. Acta Numer 19:451–559

    Article  MathSciNet  MATH  Google Scholar 

  • Swigon D, Stanhope SR, Zenker S, Rubin JE (2019) On the importance of the Jacobian determinant in parameter inference for random parameter and random measurement error models. SIAM/ASA J Uncertain Quantif 7(3):975–1006

    Article  MathSciNet  MATH  Google Scholar 

  • Takens F (1981) Dynamical systems and turbulence, Warwick 1980. Heidelberg, Springer, Berlin, pp 366–381

    Book  Google Scholar 

  • Tarantola A (2005) Inverse problem theory and methods for model parameter estimation. SIAM

  • Wangersky PJ (1978) Lotka-Volterra population models. Annu Rev Ecol Syst 9:189–218

    Article  Google Scholar 

  • Wu L, Wang Y (2011) Estimation the parameters of Lotka-Volterra model based on grey direct modelling method and its application. Expert Syst Appl 38(6):6412–6416

    Article  Google Scholar 

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Correspondence to David Swigon.

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Duan, X., Rubin, J.E. & Swigon, D. Rigorous Mapping of Data to Qualitative Properties of Parameter Values and Dynamics: A Case Study on a Two-Variable Lotka–Volterra System. Bull Math Biol 85, 64 (2023). https://doi.org/10.1007/s11538-023-01165-0

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