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Molecular basis for antifreeze activity difference of two insect antifreeze protein isoforms

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Abstract

The insect spruce budworm (Choristoneura fumiferana) produces antifreeze protein (AFP) to assist in the protection of the over-wintering larval stage and contains multiple isoforms. Structures for two isoforms, known as CfAFP-501 and CfAFP-337, show that both possess similar left-handed β-helical structure, although thermal hysteresis activity of the longer isoform CfAFP-501 is three times that of CfAFP-337. The markedly enhanced activity of CfAFP-501 is not proportional to, and cannot be simply accounted for, by the increased ice-binding site resulting from the two extra coils in CfAFP-501. In order to investigate the molecular basis for the activity difference and gain better understanding of AFPs in general, we have employed several different computational methods to systematically study the structural properties and ice interactions of the AFPs and their deletion models. In the context of intact AFPs, a majority of the coils in CfAFP-501 has better ice interaction and causes stronger ice lattice disruption than CfAFP-337, strongly suggesting a cooperative or synergistic effect among β-helical coils. The synergistic effect would play a critical role and make significant contributions to the antifreeze activity β-helical antifreeze proteins. This is the first time that synergistic effect and its implication for antifreeze activity are reported for β-helical antifreeze proteins.

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References

  1. Raymond J A, Devries A L. Adsorption inhibition as a mechanism of freezing resistance in polar fish. P Natl Acad Sci USA, 1977, 74: 2589–2593

    Article  CAS  Google Scholar 

  2. Doucet D, Tyshenko M G, Davies P L, Walker V K. A family of expressed antifreeze protein genes from the moth, Choristoneura fumiferana. Eur J Biochem, 2002, 269: 38–46

    Article  CAS  Google Scholar 

  3. Graether S P, Kuiper M J, Gagne S M, Walker V K, Jia Z, Sykes B D, Davies P L. β-helix structure and ice-binding properties of a hyperactive antifreeze protein from an insect. Nature, 2000, 401: 325–328

    Google Scholar 

  4. Leinala E K, Davies P L, Jia Z. Crystal structure of β-helical antifreeze protein points to a general ice binding model. Structure, 2002, 10: 619–627

    Article  CAS  Google Scholar 

  5. Leinala E K, Davies P L, Doucet D, Tyshenko M G, Walker V K, Jia Z. A β-helical antifreeze protein isoform with increased activity. J. Biol Chem, 2002, 277: 33349–33352

    Article  CAS  Google Scholar 

  6. Cornell W D, Cleplak P, Bayly C I, Gould I R, Merz K M, Ferguson D M, Spellmeyer D C, Fox T, Caldwell J W, Kollman P A. A second generation force field for the simulation of proteins and nucleic acids. J Am Chem Soc, 1995, 117: 5179–5197

    Article  CAS  Google Scholar 

  7. Dewar M J S, Zoebisch E G, Healy E F, Stewart J J P. AM1: a new general purpose quantum mechanical model. J Am Chem Soc, 1985, 107: 3902–3909

    Article  CAS  Google Scholar 

  8. Stewart J J P. Optimization of parameters for semi-empirical methods I-method. J Comp Chem, 1989, 10: 209–220

    Article  CAS  Google Scholar 

  9. Chen G J, Jia Z. Ice-binding surface of fish type III antifreeze. Biophys J, 1999, 77: 1602–1608

    CAS  Google Scholar 

  10. Cheng Y H, Yang Z Y, Tan H W, Liu R Z, Chen G J, Jia Z. Analysis of ice-binding sites in fish type II antifreeze protein by quantum mechanics. Biophys J, 2002, 83: 2202–2210

    CAS  Google Scholar 

  11. Yang Z, Zhou Y, Liu K, Cheng Y, Liu R, Chen G, Jia Z. Computational study on the function of water within a beta-helix antifreeze protein dimer and in the process of ice-protein binding. Biophys J, 2003, 85: 2599–2605

    Article  CAS  Google Scholar 

  12. Liu K, Jia Z, Chen G J, Tung C H, Liu R Z. Systematic size study of an insect antifreeze protein and its interaction with ice. Biophys J, 2005, 88: 953–958

    Article  CAS  Google Scholar 

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Correspondence to Chen GuangJu.

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Supported by the National Natural Science Foundation of China (Grant Nos. 26073011, 20231010, 20503002 and 20631020) and the Major State Basic Research Development Programs (Grant No. G2004CB719900)

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Zhou, Y., Tan, H., Yang, Z. et al. Molecular basis for antifreeze activity difference of two insect antifreeze protein isoforms. SCI CHINA SER B 50, 266–271 (2007). https://doi.org/10.1007/s11426-007-0027-7

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  • DOI: https://doi.org/10.1007/s11426-007-0027-7

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