Skip to main content
Log in

Eumitrins I–K: three new xanthone dimers from the lichen Usnea baileyi

  • Note
  • Published:
Journal of Natural Medicines Aims and scope Submit manuscript

Abstract

In the continuing discovery and structure elucidation of natural xanthone dimers, which are still rarely reported in absolute configuration, three new xanthone dimers, eumitrins I–K (13) were isolated from the lichen Usnea baileyi, a rich source of natural xanthone dimers. Their structures were elucidated unambiguously by spectroscopic analyses, including high-resolution electrospray ionization mass spectrometry (HRESIMS), 1D and 2D nuclear magnetic resonance spectroscopy (1D and 2D NMR). The absolute configuration of all three compounds was established through DP4 probability and ECD calculation. All compounds revealed weak activity for their enzymatic inhibition against α-glucosidase and tyrosinase, as well as antibacterial activity.

Graphical abstract

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Data availability

All data generated or analysed during this study are included in this published article (and its supplementary information files).

References

  1. Masters KS, Bräse S (2012) Xanthones from fungi, lichens, and bacteria: the natural products and their synthesis. Chem Rev 112(7):3717–3776. https://doi.org/10.1021/cr100446h

    Article  CAS  PubMed  Google Scholar 

  2. Wezeman T, Bräse S, Masters K-S (2015) Xanthone dimers: a compound family which is both common and privileged. Nat Prod Rep 32(1):6–28. https://doi.org/10.1039/C4NP00050A

    Article  CAS  PubMed  Google Scholar 

  3. Le Pogam P, Boustie J (2016) Xanthones of lichen source: a 2016 update. Molecules 21(3):294–323. https://doi.org/10.3390/molecules21030294

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Cai S, King JB, Du L, Powell DR, Cichewicz RH (2014) Bioactive sulfur-containing sulochrin dimers and other metabolites from an Alternaria sp. isolate from a Hawaiian soil sample. J Nat Prod 77(10):2280–2287. https://doi.org/10.1021/np5005449

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Kikuchi H, Isobe M, Kurata S, Katou Y, Oshima Y (2012) New dimeric and monomeric chromanones, gonytolides D-G, isolated from the fungus Gonytrichum sp. Tetrahedron 68(31):6218–6223. https://doi.org/10.1016/j.tet.2012.05.064

    Article  CAS  Google Scholar 

  6. Ehrlich KC, Lee L, Ciegler A, Palmgren M (1982) Secalonic acid D: natural contaminant of corn dust. Appl Environ Microbiol 44(4):1007–1008. https://doi.org/10.1128/aem.44.4.1007-1008.1982

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Tuong TL, Aree T, Do LTM, Nguyen PKP, Wongana P, Chavasiri W (2019) Dimeric tetrahydroxanthones from the lichen Usnea aciculifera. Fitoterapia 137:104194. https://doi.org/10.1016/j.fitote.2019.104194

    Article  CAS  PubMed  Google Scholar 

  8. Nguyen V-K, Nguyen-Si H-V, Devi AP, Poonsukkho P, Sangvichien E, Tran T-N, Yusuke H, Mitsunaga T, Chavasiri W (2021) Eumitrins FH: three new xanthone dimers from the lichen Usnea baileyi and their biological activities. Nat Prod Res. https://doi.org/10.1080/14786419.2021.2023143

    Article  PubMed  Google Scholar 

  9. Tuong TL, Do LT, Aree T, Wonganan P, Chavasiri W (2020) Tetrahydroxanthone–chromanone heterodimers from lichen Usnea aciculifera and their cytotoxic activity against human cancer cell lines. Fitoterapia 147:104732. https://doi.org/10.1016/j.fitote.2020.104732

    Article  CAS  PubMed  Google Scholar 

  10. Wu G, Yu G, Kurtan T, Mandi A, Peng J, Mo X, Liu M, Li H, Sun X, Li J (2015) Versixanthones A-F, cytotoxic xanthone–chromanone dimers from the marine-derived fungus Aspergillus versicolor HDN1009. J Nat Prod 78(11):2691–2698. https://doi.org/10.1021/acs.jnatprod.5b00636

    Article  CAS  PubMed  Google Scholar 

  11. Yang D-M, Takeda N, Iitaka Y, Sankawa V, Shibata S (1973) The structures of eumitrins A1, A2 and B. Tetrahedron 29(3):519–528. https://doi.org/10.1016/0040-4020(73)80003-1

    Article  CAS  Google Scholar 

  12. Nguyen V-K, Genta-Jouve G, Duong T-H, Beniddir MA, Gallard J-F, Ferron S, Boustie J, Mouray E, Grellier P, Chavasiri W (2020) Eumitrins CE: Structurally diverse xanthone dimers from the vietnamese lichen Usnea baileyi. Fitoterapia 141:104449. https://doi.org/10.1016/j.fitote.2019.104449

    Article  CAS  PubMed  Google Scholar 

  13. Li T-X, Yang M-H, Wang Y, Wang X-B, Luo J, Luo J-G, Kong L-Y (2016) Unusual dimeric tetrahydroxanthone derivatives from Aspergillus lentulus and the determination of their axial chiralities. Sci Rep 6:38958. https://doi.org/10.1038/srep38958

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Nguyen V-K, Duong T-H, Nguyen KPP, Sangvichien E, Wonganan P, Chavasiri W (2018) Chemical constituents of the lichen Usnea baileyi (Stirt.) Zahlbr. Tetrahedron Lett 59(14):1348–1351. https://doi.org/10.1016/j.tetlet.2018.02.007

    Article  CAS  Google Scholar 

  15. Din LB, Zakaria Z, Samsudin MW, Elix JA (2010) Chemical profile of compounds from Lichens of Bukit Larut, Peninsular Malaysia. Sains Malays 39(6):901–908

    CAS  Google Scholar 

  16. Giralt M (2010) New morphological and chemical data for Buellia imshaugii. Lichenologist 42(6):763–765. https://doi.org/10.1017/S0024282910000472

    Article  Google Scholar 

  17. Bungartz F, Elix JA, Nash TH III (2004) The genus Buellia sensu lato in the Greater Sonoran Desert Region: saxicolous species with one-septate ascospores containing xanthones. Bryologist 107(4):459–547. https://doi.org/10.1639/0007-2745(2004)107[459:TGBSLI]2.0.CO;2

    Article  Google Scholar 

  18. Lendemer JC, Sheard JW, Göran T, Tønsberg T (2012) Rinodina chrysidiata, a new species from far eastern Asia and the Appalachian Mountains of North America. Lichenologist 44(2):179–187. https://doi.org/10.1017/S0024282911000764

    Article  Google Scholar 

  19. Zhang W, Krohn K, Flörke U, Pescitelli G, Di Bari L, Antus S, Kurtán T, Rheinheimer J, Draeger S, Schulz B (2008) New mono-and dimeric members of the secalonic acid family: blennolides A-G isolated from the fungus Blennoria sp. Chem Eur J 14(16):4913–4923. https://doi.org/10.1002/chem.200800035

    Article  CAS  PubMed  Google Scholar 

  20. El-Elimat T, Figueroa M, Raja HA, Graf T, Swanson SM, Falkinham JO III, Wani MC, Pearce CJ, Oberlies NH (2015) Biosynthetically distinct cytotoxic polyketides from Setophoma terrestris. Eur J Org Chem 2015(1):109–121. https://doi.org/10.1002/ejoc.201402984

    Article  CAS  Google Scholar 

  21. Grimme S (2019) Exploration of chemical compound, conformer, and reaction space with meta-dynamics simulations based on tight-binding quantum chemical calculations. J Chem Theory Comput 15(5):2847–2862. https://doi.org/10.1021/acs.jctc.9b00143

    Article  CAS  PubMed  Google Scholar 

  22. Pracht P, Bohle F, Grimme S (2020) Automated exploration of the low-energy chemical space with fast quantum chemical methods. Phys Chem Chem Phys 22(14):7169–7192. https://doi.org/10.1039/C9CP06869D

    Article  CAS  PubMed  Google Scholar 

  23. Neese F, Wennmohs F, Becker U, Riplinger C (2020) The ORCA quantum chemistry program package. J Chem Phys 152(22):224108. https://doi.org/10.1063/5.0004608

    Article  CAS  PubMed  Google Scholar 

  24. Smith SG, Goodman JM (2010) Assigning stereochemistry to single diastereoisomers by GIAO NMR calculation: the DP4 probability. J Am Chem Soc 132(37):12946–12959. https://doi.org/10.1021/ja105035r

    Article  CAS  PubMed  Google Scholar 

  25. Grimblat N, Gavín JA, Hernández Daranas A, Sarotti AM (2019) Combining the power of J coupling and DP4 analysis on stereochemical assignments: the J-DP4 methods. Org Lett 21(11):4003–4007. https://doi.org/10.1021/acs.orglett.9b01193

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

Nguyen V-K would like to thank N. Dangphui for the authentication of the lichen material. Thanks are also extended to the graduate school of Chulalongkorn University to provide 90th year anniversary scholarship.

Funding

Chulalongkorn University to provide 90th year anniversary scholarship.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Van-Kieu Nguyen or Warinthorn Chavasiri.

Ethics declarations

Conflict of interest

No potential conflict of interest was reported by the authors.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary file1 (DOCX 12681 KB)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Nguyen, VK., Dong, PSN., Nguyen-Si, HV. et al. Eumitrins I–K: three new xanthone dimers from the lichen Usnea baileyi. J Nat Med 77, 403–411 (2023). https://doi.org/10.1007/s11418-023-01681-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11418-023-01681-2

Keywords

Navigation