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Shewanella spp. from wastewater treatment plant-affected environment: isolation and characterization

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Abstract

Bacteria from the genus Shewanella are inhabitants of marine and freshwater ecosystems, recognized fish spoilage bacteria, but less known as fish disease agents. Shewanella spp. isolated from fish living in waters close to effluents of a wastewater treatment plant (WWTP) were not previously characterized. We have tested Shewanella isolates from WWTP-affected waters and related fish. Genotypic characterization identified most strains as S. baltica and S. oneidensis. In order to investigate the sensibility and accuracy of their MALDI-TOF MS identification, they were grown on two culture media enriched by various NaCl concentrations, incubated at different temperatures and duration. We analyzed their antimicrobial susceptibility on a panel of antimicrobial drugs and capacity for biofilm production. With a view to demonstrate their capacity to produce fatty acids, we assessed the impact of different culture media on their lipid profile. We performed zebrafish embryotoxicity tests to simulate the environmental infection of the earliest life stages in S. baltica-contaminated waters. The best MALDI-TOF MS identification scores were for strains cultivated on TSA for 24 h at 22 °C and with supplementation of 1.5% NaCl. Less than 17% of isolates demonstrated antimicrobial resistance. Most isolates were weak biofilm producers. Strain-to-strain variation of MIC and MBC was low. The major fatty acids were C15:0, C16:0, C16:1, C17:1, and iC15:0. Exposure of Danio rerio to different S. baltica concentrations induced severe effects on zebrafish development: decreased heartbeat rate, locomotor activity, and melanin pigmentation. S. baltica passed through chorionic pores of zebrafish.

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Abbreviations

AMC:

Amoxicillin

AW:

Artificial water

BCFA:

Branched chain fatty acid

CFU:

Colony-forming unit

E:

Erythromycin

EPA:

Eicosapentaenoic fatty acid

FAME:

Fatty acid methyl ester

FFC:

Florfenicol

MALDI-TOF MS:

Matrix-assisted laser desorption/ionization time of flight mass spectrometry

MBC:

Minimal bactericidal concentration

MBIC:

Minimal biofilm inhibitory concentration

MCA:

MacConkey agar

MH:

Mueller-Hinton agar

MIC:

Minimal inhibitory concentration

MUFA:

Monounsaturated fatty acid

NOR:

Norfloxacin

OA:

Oxolinic acid

OD:

Optical density

ODc:

Optical density cut-off

OTC:

Oxytetracycline

PUFA:

Polyunsaturated fatty acid

PVF:

Perivitelline fluid

SFA:

Saturated fatty acid

SMX:

Sulfamethoxazole

TSA:

Tryptic soy agar

UB:

Flumequine

WWTP:

Wastewater treatment plant

ZET:

Zebrafish embryotoxicity test

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Data availability

Data will be available on reasonable request.

Funding

This study was supported by the Scientific Center of Excellence for Marine Bioprospecting – BioProCro, a project co-financed by the Croatian Government and the European Union through the European Regional Development Fund — the Competitiveness and Cohesion Operational Programme (KK.01.1.1.01). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Authors

Contributions

NTP: conceptualization; writing original draft; writing, review and editing; data curation; formal analysis; investigation; and methodology. SK: writing, review and editing; data curation; formal analysis; investigation; and methodology. BB, SB, KB, MB, ITB: data curation, formal analysis, investigation; and methodology. MJ, ISP: data curation, formal analysis, and investigation. SlK: formal analysis and investigation. RČR: writing, review and editing; funding acquisition; and investigation. All the authors read and approved the final manuscript.

Corresponding author

Correspondence to Snježana Kazazić.

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Competing interests

The authors declare no competing interests.

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Responsible Editor: Gerald Thouand

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Topić Popović, N., Kazazić, S., Bilić, B. et al. Shewanella spp. from wastewater treatment plant-affected environment: isolation and characterization. Environ Sci Pollut Res 29, 82986–83003 (2022). https://doi.org/10.1007/s11356-022-21573-4

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  • DOI: https://doi.org/10.1007/s11356-022-21573-4

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