Abstract
There is a need to develop bioassessment tools that can diagnose the effects of individual stressors that can have multiple ecological effects. Using nuclear magnetic resonance (NMR)-based metabolomics, our experiments aimed to identify the sensitivity of metabolites to changes in food availability and dissolved oxygen (DO) concentrations, and compare these results to identify metabolites that may differentiate between the effects of these two stressors. Forty-eight, laboratory-raised, red swamp crayfish (Procambarus clarkii) were randomly assigned and exposed to one of three food availability or DO treatment levels (high, normal, low). Starved crayfish had lower amounts of amino acids than fed crayfish, suggesting catabolic effects of starvation on tail muscle tissue for energy requirements. In contrast, crayfish exposed to hypoxic conditions experienced changes in abundance of metabolites primarily associated with energy metabolism. Tail muscle was the only tissue sensitive to food and DO stress, suggesting the need to select tissues for monitoring appropriately. Our evaluation of environmental metabolomics as a tool for bioassessment indicates that several identified metabolites in crayfish tail muscle may be able to diagnose food and oxygen stress. Further study is required to determine if these metabolic effects are linked with changes of individual fitness and higher levels of biological organization, such as population size.




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Aich P, Jalal S, Czuba C, Schatte G, Herzog K, Olson DJ, Ross AR, Potter A, Babiuk LA, Griebel P (2007) Comparative approaches to the investigation of responses to stress and viral infection in cattle. OMICS 11:413–434
Albert JL, Ellington WR (1985) Patterns of energy metabolism in the stone crab, Menippe mercenaria, during severe hypoxia and subsequent recovery. J Exp Zool 234:175–183
Alcorlo P, Otero M, Crehuet M, Baltanás A, Montes C (2006) The use of the red swamp crayfish (Procambarus clarkii, Girard) as indicator of the bioavailability of heavy metals in environmental monitoring in the river Guadiamar (SW, Spain). Sci Total Environ 366:380–390
Bollard ME, Stanley EG, Lindon JC, Nicholson JK, Holmes E (2005) NMR-based metabonomic approaches for evaluating physiological influences on biofluid composition. NMR Biomed 18:143–162
Bonvillain CP, Rutherford DA, Kelso WE, Green CC (2012) Physiological biomarkers of hypoxic stress in red swamp crayfish Procambarus clarkii from field and laboratory experiments. Comp Biochem Physiol A Mol Integr Physiol 163:15–21
Campillo JA, Sevilla A, Albentosa M, Bernal C, Lozano AB, Cánovas M, León VM (2015) Metabolomic responses in caged clams, Ruditapes decussatus, exposed to agricultural and urban inputs in a Mediterranean coastal lagoon (Mar Menor, SE Spain). Sci Total Environ 524-525:136–147
Carpenter SR, Caraco NF, Correll DL, Howarth RW, Sharpley AN, Smith VH (1998) Nonpoint pollution of surface waters with phosphorus and nitrogen. Ecol Appl 8:559–568
Correll DL (1998) The role of phosphorus in the eutrophication of receiving waters: a review. J Environ Qual 27:261–266
Dall W, Smith DM (1987) Changes in protein-bound and free amino acids in the muscle of the tiger prawn Penaeus esculentus during starvation. Mar Biol 95:509–520
Davis JM, Collette TW, Villeneuve DL, Cavallin JE, Teng Q, Jensen KM, Kahl MD, Mayasich JM, Ankley GT, Ekman DR (2013) Field-based approach for assessing the impact of treated pulp and paper mill effluent on endogenous metabolites of fathead minnows (Pimephales promelas). Environ Sci Technol 47:10628–10636
Dawson NJ, Storey KB (2012) An enzymatic bridge between carbohydrate and amino acid metabolism: regulation of glutamate dehydrogenase by reversible phosphorylation in a severe hypoxia-tolerant crayfish. J Comp Physiol B 182:331–340
Ekman DR, Teng Q, Villeneuve DL, Kahl MD, Jensen KM, Durhan EJ, Ankley GT, Collette TW (2008) Investigating compensation and recovery of fathead minnow (Pimephales promelas) exposed to 17α-ethynylestradiol with metabolite profiling. Environ Sci Technol 42:4188–4194
Fan TWM (1996) Metabolite profiling by one- and two-dimensional NMR analysis of complex mixtures. Prog Nucl Magn Reson Spectrosc 28:161–219
Fasulo S, Iacono F, Cappello T, Corsaro C, Maisano M, D’Agata D, Giannetto A, De Domenico E, Parrino V, Lo Paro G, Mauceri A (2012) Metabolomic investigation of Mytilus galloprovincialis (Lamarck 1819) caged in aquatic environments. Ecotox Environ Safe 84:139–146
Fujimori T, Abe H (2002) Physiological roles of free D- and L-alanine in the crayfish Procambarus clarkii with special reference to osmotic and anoxic stress responses. Comp Biochem Physiol A Mol Integr Physiol 131:893–900
Hellawell JM (1986) Biological indicators of freshwater pollution and environmental management. Elsevier Applied Science Publishers, New York
Hines A, Staff FJ, Widdows J, Compton RM, Falciani F, Viant MR (2010) Discovery of metabolic signatures for predicting whole organism toxicology. Toxicol Sci 115:369–378
Ji C, Cao L, Li F (2015) Toxicological evaluation of two pedigrees of clam Ruditapes philippinarum as bioindicators of heavy metal contaminants using metabolomics. Environ Toxicol Pharmacol 39:545–554
Johnson RK, Weiderholm T, Rosenberg DM (1993) Freshwater biomonitoring using individual organisms, populations, and species assemblages of benthic macroinvertebrates. In: Rosenberg DM, Resh VH (1993) Freshwater biomonitoring and benthic macroinvertebrates. Chapman and Hall, New York, pp 40–125
Jones OA, Spurgeon DJ, Svendsen C, Griffin JL (2008) A metabolomics based approach to assessing the toxicity of the polyaromatic hydrocarbon pyrene to the earthworm Lumbricus rubellus. Chemosphere 71:601–609
Koop JH, Winkelmann C, Becker J, Hellmann C, Ortmann C (2011) Physiological indicators of fitness in benthic invertebrates: a useful measure for ecological health assessment and experimental ecology. Aquat Ecol 45:547–559
Lankadurai BP, Nagato EG, Simpson MJ (2013) Environmental metabolomics: an emerging approach to study organism responses to environmental stressors. Environ Rev 21:180–205
Lee AC, Lee MC, Lee YH, Lee YC (2008) Candidates for a hypoxia-stress indicator in the hard clam, Meretrix lusoria. Aquaculture 278:150–155
Li MH, Ruan LY, Liu Y, Xu HD, Chen T, Fu YH, Jiang L, Wang JS (2015) Insight into biological system responses in goldfish (Carassius auratus) to multiple doses of avermectin exposure by integrated 1H NMR-based metabolomics. Toxicol Res 4:1374–1388
Lin CY, Viant MR, Tjeerdema RS (2006) Metabolomics: methodologies and applications in the environmental sciences. J Pest Sci 31:245–251
Liu X, Zhang L, You L, Yu J, Cong M, Wang Q, Li F, Li L, Zhao J, Li C, Wu H (2011) Assessment of clam Ruditapes philippinarum as heavy metal bioindicators using NMR-based metabolomics. CLEAN-Soil, Air, Water 39:759–766
Miller MG (2007) Environmental metabolomics: a SWOT analysis (strengths, weaknesses, opportunities, and threats). J Proteome Res 6:540–545
Miltner RJ, Rankin ET (1998) Primary nutrients and the biotic integrity of rivers and streams. Freshw Biol 40:145–158
Nyström P (2002) (Ecology). In: Holdich D (ed) Biology of freshwater crayfish. Blackwell Science, Oxford, pp 192–235
Okama E, Abe H (1998) Effects of starvation and D- or L-alanine administration on the free D- and L-alanine levels in the muscle and hepatopancreas of the crayfish, Procambarus clarkii. Comp Biochem Physiol A Mol Integr Physiol 120:681–686
Reddy MS, Sailaja M (1996) Changes in hemolymph amino acid profiles during starvation in the penaeid prawn, Penaeus monodon. Proc Indian Natl Sci Acad Part B Biol Sci 62:239–246
Rosenberg DM, Wiens AP (1976) Community and species responses of Chironomidae (Diptera) to contamination of fresh waters by crude oil and petroleum products, with special reference to the Trail River, Northwest Territories. J Fish Board Canada 33:1955–1963
Samuelsson LM, Björlenius B, Förlin L, Larsson DJ (2011) Reproducible 1H NMR-based metabolomic responses in fish exposed to different sewage effluents in two separate studies. Environ Sci Technol 45:1703–1710
Schirf VR, Turner P, Selby L, Hannapel C, De La Cruz P, Dehn PF (1987) Nutritional status and energy metabolism of crayfish (Procambarus clarkii, Girard) muscle and hepatopancreas. Comp Biochem Physiol A Physiol 88:383–386
Schwoch G (1972) Some studies on biosynthesis and function of trehalose in the crayfish Orconectes limosus. Comp Biochem Physiol B Comp Biochem 43:905–917
Shen H, Hu Y, Ma Y, Zhou X, Xu Z, Shui Y, Li C, Xu P, Sun X (2014) In-depth transcriptome analysis of the red swamp crayfish Procambarus clarkii. PLoS One 9:e110548
Skelton DM, Ekman DR, Martinović-Weigelt D, Ankley GT, Villeneuve DL, Teng Q, Collette TW (2014) Metabolomics for in situ environmental monitoring of surface waters impacted by contaminants from both point and nonpoint sources. Environ Sci Technol 48:2395–2403
Southam AD, Lange A, Hines A, Hill EM, Katsu Y, Iguchi T, Tyler CR, Viant MR (2011) Metabolomics reveals target and off-target toxicities of a model organophosphate pesticide to roach (Rutilus rutilus): implications for biomonitoring. Environ Sci Technol 45:3759–3767
Stokes TM, Awapara J (1968) Alanine and succinate as end-products of glucose degradation in the clam Rangia cuneata. Comp Biochem Physiol 25:883–892
Tuffnail W, Mills GA, Cary P, Greenwood R (2009) An environmental 1H NMR metabolomic study of the exposure of the marine mussel Mytilus edulis to atrazine, lindane, hypoxia and starvation. Metabolomics 5:33–43
Viant MR (2003) Improved methods for the acquisition and interpretation of NMR metabolomic data. Biochem Biophys Res Commun 310:943–948
Viant MR (2007a) Metabolomics of aquatic organisms: the new “omics” on the block. Marine Ecol Prog Ser 332:301–306
Viant MR (2007b) Revealing the metabolome of animal tissues using 1H nuclear magnetic resonance spectroscopy. In: Weckwerth W (ed) (2007) Methods in Molecular Biology, vol. 358: Metabolomics: methods and protocols. Humana Press Inc., Totowa, pp 229–246
Wagner ND, Lankadurai BP, Simpson MJ, Simpson AJ, Frost PC (2015) Metabolomic differentiation of nutritional stress in an aquatic invertebrate. Physiol Biochem Zool 88:43–52
Wei K, Yang J (2015) Oxidative damage induced by copper and beta-cypermethrin in gill of the freshwater crayfish Procambarus clarkii. Ecotox Environ Safe 113:446–453
Xia J, Mandal R, Sinelnikov IV, Broadhurst D, Wishart DS (2012) MetaboAnalyst 2.0—a comprehensive server for metabolomic data analysis. Nucleic Acids Res 40:W127–W133
Acknowledgments
We thank Daryl Halliwell for assistance with laboratory logistics and sample processing. We thank Karen Machin from the Veterinary Biomedical Sciences, Western College of Veterinary Medicine, University of Saskatchewan and Keith Brown of the University of Saskatchewan Structural Science Centre for NMR spectroscopy assistance.
Funding
Research funding was provided by Environment Canada’s Lake Winnipeg Basin Initiative, the Canadian Water Network Tobacco Creek Model Watershed Consortia Grant, and separate NSERC Discover Grants to J.M.C. and A.G.Y.
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Izral, N.M., Brua, R.B., Culp, J.M. et al. Developing metabolomics-based bioassessment: crayfish metabolome sensitivity to food and dissolved oxygen stress. Environ Sci Pollut Res 25, 36184–36193 (2018). https://doi.org/10.1007/s11356-018-3518-5
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DOI: https://doi.org/10.1007/s11356-018-3518-5


