Skip to main content

Advertisement

Log in

How to model and simulate the effects of cropping systems on population dynamics and gene flow at the landscape level: example of oilseed rape volunteers and their role for co-existence of GM and non-GM crops

  • IMPLICATIONS OF GM-CROP CULTIVATION • SERIES • RESEARCH ARTICLE
  • Published:
Environmental Science and Pollution Research Aims and scope Submit manuscript

Abstract

Background, aim and scope

Agricultural landscapes comprise cultivated fields and semi-natural areas. Biological components of these compartments such as weeds, insect pests and pathogenic fungi can disperse sometimes over very large distances, colonise new habitats via insect flight, spores, pollen or seeds and are responsible for losses in crop yield (e.g. weeds, pathogens) and biodiversity (e.g. invasive weeds). The spatiotemporal dynamics of these biological components interact with crop locations, successions and management as well as the location and management of semi-natural areas such as roadverges. The objective of this investigation was to establish a modelling and simulation methodology for describing, analysing and predicting spatiotemporal dynamics and genetics of biological components of agricultural landscapes. The ultimate aim of the models was to evaluate and propose innovative cropping systems adapted to particular agricultural concerns. The method was applied to oilseed rape (OSR) volunteers playing a key role for the coexistence of genetically modified (GM) and non-GM oilseed rape crops, where the adventitious presence of GM seeds in non-GM harvests (AGMP) could result in financial losses for farmers and cooperatives.

Material and methods

A multi-year, spatially explicit model was built, using field patterns, climate, cropping systems and OSR varieties as input variables, focusing on processes and cultivation techniques crucial for plant densities and pollen flow. The sensitivity of the model to input variables was analysed to identify the major cropping factors. These should be modified first when searching for solutions limiting gene flow. The sensitivity to model processes and species life-traits were analysed to facilitate the future adaptation of the model to other species. The model was evaluated by comparing its simulations to independent field observations to determine its domain of validity and prediction error.

Results

The cropping system study determined contrasted farm types, simulated the current situation and tested a large range of modifications compatible with each farm to identify solutions for reducing the AGMP. The landscape study simulated gene flow in a large number of actual and virtual field patterns, four combinations of regional OSR and GM proportions and three contrasted cropping systems. The analysis of the AGMP rate at the landscape level determined a maximum acceptable GM OSR area for the different cropping systems, depending on the regional OSR volunteer infestation. The analysis at the field level determined minimum distances between GM and non-GM crops, again for different cropping systems and volunteer infestations.

Discussion

The main challenge in building spatially explicit models of the effects of cropping systems and landscape patterns on species dynamics and gene flow is to determine the spatial extent, the time scale, the major processes and the degree of mechanistic description to include in the model, depending on the species characteristics and the model objective.

Conclusions

These models can be used to study the effects of cropping systems and landscape patterns over a large range of situations. The interactions between the two aspects make it impossible to extrapolate conclusions from individual studies to other cases. The advantage of the present method was to produce conclusions for several contrasted farm types and to establish recommendations valid for a large range of situations by testing numerous landscapes with contrasted cropping systems. Depending on the level of investigation (region or field), these recommendations concern different decision-makers, either farmers and technical advisors or cooperatives and public decision-makers.

Recommendations and perspectives

The present simulation study showed that gene flow between coexisting GM and non-GM varieties is inevitable. The management of OSR volunteers is crucial for containing gene flow, and the cropping system study identified solutions for reducing these volunteers and ferals in and outside fields. Only if these are controlled can additional measures such as isolation distances between GM and non-GM crops or limiting the proportion of the region grown with GM OSR be efficient. In addition, particular OSR varieties contribute to limit gene flow. The technical, organisational and financial feasibility of the proposed measures remains to be evaluated by a multi-disciplinary team.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+
from $39.99 /Month
  • Starting from 10 chapters or articles per month
  • Access and download chapters and articles from more than 300k books and 2,500 journals
  • Cancel anytime
View plans

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Adamczyk K, Angevin F, Colbach N, Lavigne C, Le Ber F, Mari JF (2007) GenExP, un logiciel simulateur de paysages agricoles pour l’étude de la diffusion de transgènes. Rev Int Géomatique 17:469–487

    Article  Google Scholar 

  • Angevin F, Colbach N, Meynard JM, Roturier C (2002) Analysis of necessary adjustments of farming practices. In: Bock A-K, Lheureux K, Libeau-Dulos M, Nilsagard H, Rodriguez-Cerezo E (eds) Scenarios for co-existence of genetically modified, conventional and organic crops in European agriculture. Technical Report Series of the Joint Research Center of the European Commission, EUR 20394 EN, Sevilla, Spain

    Google Scholar 

  • Angevin F, Klein EK, Choimet C, Gauffreteau A, Lavigne C, Messean A, Meynard JM (2008) Modelling impacts of cropping systems and climate on maize cross-pollination in agricultural landscapes: The MAPOD model. Eur J Agron 28:471–484

    Article  Google Scholar 

  • Aubry C, Papy F, Capillon A (1998) Modelling decision-making processes for annual crop management. Agric Syst 56:45–65

    Article  Google Scholar 

  • Beckie HJ, Hall LM (2008) Simple to complex: modelling crop pollen-mediated gene flow. Plant Sci 175:615–628

    Article  CAS  Google Scholar 

  • Bilsborrow PE, Evans EJ, Bowman J, Bland BF (1998) Contamination of edible double-low oilseed rape crops via pollen transfer from high erucic cultivars. J Sci Food Agr 76:17–22

    Article  CAS  Google Scholar 

  • Bouvier A, Adamczyk K, Kiêu K, Monod H (2008) Computation of integrated flow of particles between polygons. Environ Model Softw (in press)

  • Brown JKM, Hovmøller MS (2002) Aerial dispersal of pathogens on the global and continental scales and its impact on plant disease. Science 297:537–541

    Article  CAS  Google Scholar 

  • Chèvre AM, Eber F, Baranger A, Renard M (1997) Gene flow from transgenic crops. Nature 389:924

    Article  Google Scholar 

  • Colbach N, Debaeke P (1998) Integrating crop management and crop rotation effects into models of weed population dynamics: a review. Weed Sci 46:717–728

    CAS  Google Scholar 

  • Colbach N, Meynard JM (1995) Soil tillage and eyespot: influence of crop residue distribution on disease development and infection cycles. Eur J Plant Pathol 101:601–611

    Article  Google Scholar 

  • Colbach N, Clermont-Dauphin C, Meynard JM (2001a) GENESYS: a model of the influence of cropping system on gene escape from herbicide tolerant rapeseed crops to rape volunteers. II. Genetic exchanges among volunteer and cropped populations in a small region. Agric Ecosyst Environ 83:255–270

    Article  Google Scholar 

  • Colbach N, Clermont-Dauphin C, Meynard JM (2001b) GENESYS: a model of the influence of cropping system on gene escape from herbicide tolerant rapeseed crops to rape volunteers. I. Temporal evolution of a population of rapeseed volunteers in a field. Agric Ecosyst Environ 83:235–253

    Article  Google Scholar 

  • Colbach N, Angevin F, Meynard JM, Messéan A (2004a) Using the GENESYS model quantifying the effect of cropping systems on gene escape from GM rape varieties to evaluate and design cropping systems. OCL 11:11–20

    Google Scholar 

  • Colbach N, Molinari N, Clermont-Dauphin C (2004b) Sensitivity analyses for a model simulating demography and genotype evolutions with time. Application to GENESYS modelling gene flow between rapeseed varieties and volunteers. Ecol Modelling 179:91–113

    Article  Google Scholar 

  • Colbach N, Dürr C, Roger-Estrade J, Caneill J (2005a) How to model the effects of farming practices on weed emergence. Weed Res 45:2–17

    Article  Google Scholar 

  • Colbach N, Fargue A, Sausse C, Angevin F (2005b) Evaluation and use of a spatio-temporal model of cropping system effects on gene flow. Example of the GENESYS model applied to three co-existing herbicide tolerance transgenes. Eur J Agron 22:417–440

    Article  Google Scholar 

  • Colbach N, Molinari N, Meynard JM, Messéan A (2005c) Spatial aspects of gene flow between rapeseed varieties and volunteers: an application of the GENESYS model based on a spatio-temporal sensitivity analysis. Agron Sustain Dev 25:355–368

    Article  CAS  Google Scholar 

  • Colbach N, Dürr C, Roger-Estrade J, Chauvel B, Caneill J (2006) ALOMYSYS: modelling blackgrass (Alopecurus myosuroides Huds.) germination and emergence, in interaction with seed characteristics, tillage and soil climate. I. Construction. Eur J Agron 24:95–112

    Article  Google Scholar 

  • Colbach N, Devaux C, Angevin F (2008a) Comparative study of the efficiency of buffer zones and harvest discarding on gene flow containment in oilseed rape. A modelling approach. Eur J Agron. doi:10.1016/j.eja.2008.09.007

  • Colbach N, Dürr C, Gruber S, Pekrun C (2008b) Modelling the seed bank evolution and emergence of oilseed rape volunteers for managing co-existence of GM and non-GM varieties. Eur J Agron 28:19–32

    Article  CAS  Google Scholar 

  • Colbach N, Monod H, Lavigne C (2009) A simulation study of the effects of field patterns on cross-pollination rates in oilseed rape. J Appl Ecol (in press)

  • Debeljak M, Squire GR, Demsar D, Young MW, Dzeroski S (2008) Relations between the oilseed rape volunteer seedbank, and soil factors, weed functional groups and geographical location in the UK. Ecol Model 212:138–146

    Article  Google Scholar 

  • Devaux C, Lavigne C, Falentin-Guyomarc’h H, Vautrin S, Lecomte J, Klein EK (2005) High diversity of oilseed rape pollen clouds over an agro-ecosystem indicates long-distance dispersal. Mol Ecol 14:2269–2280

    Article  CAS  Google Scholar 

  • Devaux C, Lavigne C, Austerlitz F, Klein EK (2007) Modelling and estimating pollen movement in oilseed rape (Brassica napus) at the landscape scale using genetic markers. Mol Ecol 16:487–499

    Article  CAS  Google Scholar 

  • Devaux C, Klein EK, Lavigne C, Sausse C, Messéan A (2008) Environmental and landscape effects on cross-pollination rates observed at long-distance among French oilseed rape (Brassica napus) commercial fields. J Appl Ecol 45:803–812

    Article  Google Scholar 

  • Eastham K, Sweet JB (2002) Genetically modified organisms (GMOs) the significance of gene flow through pollen transfer. European Environment Agency, Luxembourg

    Google Scholar 

  • Eber F, Chèvre AM, Baranger A, Vallée P, Tanguy X, Renard M (1994) Spontaneous hybridization between a male-sterile oilseed rape and two weeds. Theor Appl Genet 88:362–368

    Article  Google Scholar 

  • EC (2001) Scientific Committee on Plants, opinion from 13 March 2001

  • EC (2003a) Regulation (EC) n° 1830/2003 of the European Parliament and of the Council of 22 September 2003 concerning the traceability and labelling of genetically modified organisms and the traceability of food and feed products produced from genetically modified organisms and amending Directive 200/18/EC. JOCE L268:24–28

  • EC (2003b) La Commission publie des recommandations visant à assurer la co-existence des cultures génétiquement modifiées et des autres cultures. IP/03/1096

  • EC (2003c) Regulation (EC) N° 1829/2003 of the European Parliament and of the Council of 22 September 2003 on genetically modified food and feed. Official Journal of the European Union L268:1–23

  • Fargue A, Colbach N, Meynard JM (2005) Introduction of genotypic effects into GENESYS-RAPE: the example of height and male sterility. Agric Ecosyst Environ 108:318–328

    Article  Google Scholar 

  • Fargue A, Colbach N, Pierre J, Picault H, Renard M, Meynard JM (2006) Predictive study of the advantages of cleistogamy in rapeseed. Euphitica 151:1–13

    Article  Google Scholar 

  • Fortin MJ, Boots B, Csillag F, Remmel TK (2003) On the role of spatial stochastic models in understanding landscape indices in ecology. Oikos 102:203–213

    Article  Google Scholar 

  • Garnier A, Pivard S, Lecomte J (2008) Measuring and modelling anthropogenic secondary seed dispersal along roadverges for feral oilseed rape. Basic Appl Ecol 9:533–541

    Article  Google Scholar 

  • Gilligan CA (1995) Modeling soil-borne pathogens—reaction-diffusion models. Can J Plant Pathol 17:96–108

    Google Scholar 

  • Gruber S, Pekrun C, Claupein W (2005) Life cycle and potential gene flow of volunteer oilseed rape in different tillage systems. Weed Res 45:83–93

    Article  Google Scholar 

  • Holst N, Rasmussen IA, Bastiaans L (2007) Field weed population dynamics: a review of model approaches and applications. Weed Res 47:1–14

    Article  Google Scholar 

  • Hornberger GM, Spear RC (1981) An approach to the preliminary analysis of environmental systems. J Environ Management 12:7–18

    Google Scholar 

  • Ingram J (2000) The separation distances required to ensure cross-pollination is below specified limits in non-seed crops of sugar beet, maize and oilseed rape. Plant Var Seeds 13:181–199

    Google Scholar 

  • Klein EK, Lavigne C, Picault H, Renard M, Gouyon PH (2006) Pollen dispersal of oilseed rape: estimation of the dispersal function and effects of field dimensions. J Appl Ecol 43:1141–151

    Article  Google Scholar 

  • Lavigne C (1994) Les risques associés à la culture de plantes transgéniques résistantes aux herbicides. Thèse de Doctorat Thesis, INA PG, Paris, 98 pp

  • Lavigne C, Klein EK, Vallée P, Pierre J, Godelle B, Renard M (1998) A pollen-dispersal experiment with transgenic oilseed rape. Estimation of the average pollen dispersal of an individual plant within a field. Theor Appl Genetics 96:886–896

    Article  Google Scholar 

  • Le Ber F, Lavigne C, Mari JF, Adamczyk K, Angevin F (2006) GenExP, un logiciel pour simuler des paysages agricoles, en vue de l’étude de la diffusion de transgènes. In: Weber C, Gançarski P (eds), Actes du Colloque International de Géomatique et d’Analyse Spatiale (SAGEO 2006), Strasbourg, pp. Cdrom, 2006. ISBN: 2-9526014-1-0

  • Legay JM (1996) L’expérience et le modèle. Un discours sur la méthode. Sciences en questions. INRA, Paris 111 pp

    Google Scholar 

  • Leslie PH (1945) On the use of matrices in population mathematics. Biometrika 33:183–212

    Article  Google Scholar 

  • Lipsius K, Richter O, Schmalstied K (2007) Integration of landscape discontinuities into gene-flow models. In: Stein AJ, Rodríguez-Cerezo E (eds), GMCC07—Third International Conference on Coexistence between Genetically Modified (GM) and non-GM based Agricultural Supply Chains, Seville, Spain, pp 127–130

  • Lô-Pelzer E, Aubertot JN, Bousset L, Salam MU, M.H. J (2008) SIPPOM-WOSR: a Simulator for integrated pathogen population management to design control strategies against phoma stem canker on winter oilseed rape. Maintaining the efficiency of specific resistances, Xth Congress of the European Society of Agronomy, Bologna, Italy

  • Lutman PJW (1993) The occurrence and persistence of volunteer oilseed rape (Brassica napus). Aspects Appl Biol 35:29–36

    Google Scholar 

  • Messéan A, Sausse C, Gasquez J, Darmency H (2007) Occurrence of genetically modified oilseed rape seeds in the harvest of subsequent conventional oilseed rape over time. Eur J Agron 27:115–122

    Article  Google Scholar 

  • Minogue KP (1989) Diffusion and spatial probability models for disease spread. In: Jeger MJ (ed), Spatial components of plant disease epidemics, pp 127–143

  • Nagarajan S, Singh DV (1990) Long-distance dispersion of rust pathogens. Ann Rev Phytopathol 28:139–153

    Article  Google Scholar 

  • Parysow P, Gertner G (1997) Virtual experimentation: conceptual models and hypothesis testing of ecological scenarios. Ecol Modelling 98:59–71

    Article  Google Scholar 

  • Pekrun C, Lane PW, Lutman PJW (2005) Modelling seedbank dynamics of volunteer oilseed rape (Brassica napus). Agric Syst 84:1–20

    Article  Google Scholar 

  • Pessel FD, Lecomte J, Emeriau V, Krouti M, Messean A, Gouyon PH (2001) Persistence of oilseed rape (Brassica napus L.) outside of cultivated fields. Theor Appl Genetics 102:841–846

    Article  Google Scholar 

  • Pivard S, Adamczyk K, Lecomte J, Lavigne C, Bouvier A, Deville A, Gouyon PH, Huet S (2008a) Where do the feral oilseed rape populations come from? A large-scale study of their possible origin in a farmland area. J Appl Ecol 45:476–485

    Article  Google Scholar 

  • Pivard S, Demsar D, Lecomte J, Debeljak M, Dzeroski S (2008b) Characterizing the presence of oilseed rape feral populations on field margins using machine learning. Ecol Modelling 212:147–154

    Article  Google Scholar 

  • Prew RD (1977) Studies of the spread, survival and control of take-all and other foot and root disease of wheat and barley. Ph.D. Thesis, University of London

  • Price JS, Hobson RN, Neale MA, Bruce DM (1996) Seed losses in commercial harvesting of oilseed rape. J agric Engng Res 65:183–191

    Article  Google Scholar 

  • Reau R, Meynard JM, Robert D, Gitton C (1996) Des essais factoriels aux essais ‘conduite de culture’, Expérimenter sur les conduites de cultures: un nouveau savoir-faire au service d’une agriculture en mutation. DERF-ACTA, Paris, pp 52–62

    Google Scholar 

  • Reboud X (2003) Effect of a gap on gene flow between otherwise adjacent transgenic Brassica napus crops. Theor Appl Genetics 106:1048–1058

    CAS  Google Scholar 

  • Richter O, Seppelt R (2004) Flow of genetic information through agricultural ecosystems: a generic modelling framework with application to pesticide-resistance weeds and genetically modified crops. Ecol Modelling 174:55–66

    Article  Google Scholar 

  • Roger-Estrade J, Colbach N, Leterme P, Richard G, Caneill J (2001) Modelling vertical and lateral weed seed movements during moulboard ploughing with a skim-coulter. Soil Tillage Res 63:35–49

    Article  Google Scholar 

  • Saltelli A, Chan K, Scott EME (2000) Sensitivity analysis. Wiley series in probability and statistics. Wiley, Chichester

    Google Scholar 

  • Schröder B, Seppelt R (2006) Analysis of pattern–process interactions based on landscape models—overview, general concepts, and methodological issues. Ecol Modelling 199:505–516

    Article  Google Scholar 

  • Sebillotte M (1990) Système de culture, un concept opératoire pour les agronomes. In: Combe L, Picard D (eds) Les systèmes de culture. INRA, Paris, pp 165–196

    Google Scholar 

  • Sester M, Dürr C, Darmency H, Colbach N (2007) Modelling the effects of cropping systems on the seed bank dynamics and emergence of weed beet. Ecol Modelling 204:47–58

    Article  Google Scholar 

  • Sester M, Tricault Y, Darmency H, Colbach N (2008) GENESYS-BEET: a model of the effects of cropping systems on gene flow between sugar beet and weed beet. Field Crops Res 107:245–256

    Article  Google Scholar 

  • Sweet J (2002) Analysis of potential risks of contamination. In: Bock A-K, Lheureux K, Libeau-Dulos M, Nilsagard H, Rodriguez-Cerezo E (eds), Scenarios for co-existence of genetically modified, conventional and organic crops in European agriculture. Technical Report Series of the Joint Research Center of the European Commission, EUR 20394 EN, Sevilla, Spain

  • Thompson CJ, Thompson BJP, Ades PK, Cousens R, Garnier-Gere P, Landman K, Newbigin E, Burgman MA (2003) Model-based analysis of the likelihood of gene introgression from genetically modified crops into wild relatives. Ecol Model 162:199–209

    Article  Google Scholar 

  • von der Lippe M, Kowarik I (2007) Crop seed spillage along roads: a factor of uncertainty in the containment of GMO. Ecography 30:483–490

    Google Scholar 

  • Weekes R, Deppe C, Allnutt T, Boffey C, Morgan D, Morgan S, Bilton M, Daniels R, Henry C (2005) Crop-to-crop gene flow using farm scale sites of oilseed rape (Brassica napus) in the UK. Transgenic Res 14:749–759

    Article  CAS  Google Scholar 

Download references

Acknowledgement

We are grateful to Claire Lavigne (INRA Avignon), Frédérique Angevin (INRA Grignon) and Yann Tricault (INRA Dijon) for their help in improving the present manuscript. Over the years, the GENESYS project was financed by INRA, CETIOM, the French Ministry of Research (AIP Impact des OGM), the European Project SIGMEA (contract n502981).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nathalie Colbach.

Additional information

Responsible editors: Winfried Schröder and Gunther Schmidt

Rights and permissions

Reprints and permissions

About this article

Cite this article

Colbach, N. How to model and simulate the effects of cropping systems on population dynamics and gene flow at the landscape level: example of oilseed rape volunteers and their role for co-existence of GM and non-GM crops. Environ Sci Pollut Res 16, 348–360 (2009). https://doi.org/10.1007/s11356-008-0080-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11356-008-0080-6

Keywords

Profiles

  1. Nathalie Colbach