Abstract
The molecular and physiological work related to cold hardiness in Eucalyptus globulus and the cold-responsive dehydrins is reported. The identification and full-length gene sequence of three dehydrins of 10, 20, and 30 kDa and the comparison of their promoters regarding to potential stress and hormone response elements in E. globulus are shown. The categorization of cold-responsive proteins as dehydrin was based on the similarity in amino acid composition with selected sequenced peptides from chilling-responsive dehydrin reported for other woody plants and the increasing of gene expression level during cold acclimation. The transcript accumulation for these three dehydrin genes increased with cold acclimation and decreased with deacclimation in leaf and stem tissues, being higher in a freezing-resistant genotype of E. globulus compared to a sensitive genotype. By western blot, five dehydrin peptides were identified which increased their expression, under cold stress in leaf and stem tissues. These results provide valuable information about cold acclimation and gene regulation in eucalypt genotypes that differ in their ability to tolerate frost temperature.
Similar content being viewed by others
References
Arora R, Wisniewski ME (1994) Cold acclimation in genetically related (sibling) deciduous and evergreen peach (Prunus persica (L.) Batsch). II. A 60-kilodalton bark protein in cold-acclimated tissues of peach are heat stable and related to the dehydrin family of proteins. Plant Physiol 105:95–101
Arora R, Wisniewski ME, Scorza R (1992) Cold acclimation in genetically related (sibling) deciduous and evergreen peach (Prunus persica [L.] Batsch). I. Seasonal changes in cold hardiness and polypeptides of bark and xylem tissues. Plant Physiol 99:1562–1568
Artlip T, Wisniewski ME (1997) Tissue-specific expression of a dehydrin gene in one-year-old ‘Rio Oso Gem’ peach trees. J Am Soc Hortic Sci 122:784–787
Bassett CL, Wisniewski ME, Artlip TS, Norelli JL, Renaut J, Farell RE Jr (2006) Global analysis of genes regulated by low temperature and photoperiod in peach bark. J Am Soc Hortic Sci 131:551–563
Bassett CL, Wisniewski ME, Artlip TS, Richart G, Norelli JL, Farrell RE Jr (2009) Comparative expression and transcript initiation of three peach dehydrin genes. Planta 230:107–118
Bomal C, van Quy Le, Tremblay FM (2002) Induction of tolerance to fast desiccation in black spruce (Picea mariana) somatic embryos: relationship between partial water loss, sugars, and dehydrins. Physiol Plant 115:523–530
Bravo LA, Gallardo J, Navarrete A, Olave N, Martínez J, Alberdi M, Close TJ, Corcuera LJ (2003) Cryoprotective activity of a cold induced dehydrin purified from barley. Physiol Plant 118:262–269
Campbell SA, Close TJ (1997) Dehydrins: genes, proteins, and associations with phenotypic traits. New Phytol 137:61–74
Chang S, Puryear J, Cairney J (1993) A simple method for isolating RNA from pine trees. Plant Mol Biol Rep 11:113–116
Chinusamy V, Zhu J, Zhu JK (2007) Cold stress regulation of gene expression in plants. Trends Plant Sci 10:444–451
Close TJ (1996) Dehydrins: emergence of a biochemical role of a family of plant dehydration proteins. Physiol Plant 97:795–803
Close TJ, Artlip TS, Callahan AM, Bassett CL, Wisniewski ME (1997) Seasonal expression of a dehydrin gene in sibling deciduous and evergreen genotypes of peach (Prunus persica (L.) Batsch). Plant Mol Biol 33:61–70
Costa e Silva F, Shvaleva A, Broetto F, Ortuño MF, Rodrigues ML, Almeida MH, Chaves MM, Pereira JS (2008) Acclimation to short-term low temperatures in two Eucalyptus globulus clones with contrasting drought resistance. Tree Physiol 29:77–86
Danyluk J, Perron A, Houde M, Limin A, Fowler B, Benhamou N, Sarhan F (1998) Accumulation of an acidic dehydrin in the vicinity of the plasma membrane during cold acclimation of wheat. Plant Cell 10:623–638
Dhanaraj AL, Slovin JP, Rowland LJ (2004) Analysis of gene expression associated with cold acclimation in blueberry floral buds using expressed sequence tags. Plant Sci 166:863–872
Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure from small quantities of fresh leaf tissues. Phytochem Bull 19:11–15
Dunn MA, White AJ, Vural S, Hughes MA (1998) Identification of promoter elements in a low-temperature-responsive gene (blt4.9) from barley (Hordeum vulgare L.). Plant Mol Biol 38:551–564
Esen A (1978) A simple method for quantitative, semi-quantitative and qualitative assay of protein. Anal Biochem 80:264–273
Fernández M, Valenzuela S, Balocchi C (2006) RAPD and freezing resistance in Eucalyptus globulus. Electron J Biotechnol 9:303–309
Fernández M, Villarroel C, Balbontín C, Valenzuela S (2010) Validation of reference genes for real-time qRT-PCR normalization during cold acclimation in Eucalyptus globulus. Trees 24:1109–1116
Gaspar MM, Ferreira RB, Chaves MM, Teixeira AR (1997) Improved method for the extraction of proteins from Eucalyptus leaves. Application in leaf response to temperature. Phytochem Anal 8(279):285
Golan-Goldhirsh A, Shachak A (1998) Immunological cross-reaction between bud and bark proteins of dormant deciduous trees. Sci Hortic 73:165–173
Hara M, Fujinaga M, Kuboi T (2005) Metal binding by citrus dehydrin with histidine-rich domains. J Exp Bot 56:2695–2703
Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27:297–300
Hinniger C, Caillet V, Michoux F, Ben Amor M, Tanksley S, Lin C, McCarthy J (2006) Isolation and characterization of cDNA encoding three dehydrins expressed during Coffea canephora (Robusta) grain development. Ann Bot 97:755–765
Ishige N, Kondo K, Furujyo A, Hibino T (2004) Genetic improvement for environmental stress resistance in Eucalyptus. In: Proc Plant and Animal Genome 12th Conf, San Diego, California, 10–14 January, http://www.intl-pag.org/12/abstracts
Iwasaki T, Yamaguchi-Shinozaki K, Shinozaki K (1995) Identification of a cis-regulatory region of a gene in Arabidopsis thaliana whose induction by dehydration is mediated by abscisic acid and requires protein synthesis. Mol Gen Genet 247:391–398
Joosen RVL, Lammers M, Balk PA, Brønnum P, Konings MC, Perks M, Stattin E, Van Wordragen MF, Van der Geest AL (2006) Correlating gene expression programs to physiological parameters and environmental conditions during cold acclimation of pine (Pinus sylvestris). Tree Physiol 26:1297–1313
Keller G, Marchal T, SanClemente H, Navarro M, Ladouce N, Wincker P, Couloux A, Teulières C, Marque C (2009) Development and functional annotation of an 11,303-EST collection from Eucalyptus for studies of cold stress. Tree Genet Genomes 5:317–327
Koag MC, Fenton RD, Wilens S, Close TJ (2003) The binding of maize DHN1 to lipid vesicles. Gain of structure and lipid specificity. Plant Physiol 131:309–316
Koag MC, Wilkens S, Fenton RD, Resnik J, Vo E, Close TJ (2009) The K-segment of maize DHN1 mediates binding to anionic phospholipid vesicles and concomitant structural changes. Plant Physiol 150:1503–1514
Kosová K, Vítámvás P, Práŝil IT (2007) The role of dehydrins in plant response to cold. Biol Plant 51:601–617
Krüger C, Berkowitz O, Stephan UW, Hell R (2002) A metal-binding member of the late embryogenesis abundant protein family transports iron in the phloem of Ricinus communis L. J Biol Chem 277:25062–25069
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685
Layton B, Boyd M, Tripepi M, Bitonti B, Norman M, Dollahon R, Balsamo R (2010) Dehydration-induced expression of a 31-kDa dehydrin in Polypodium polypodioides (Polypodiaceae) may enable large, reversible deformation of cell walls. Am J Bot 97:535–544
Lescot M, Déhais P, Moreau Y, De Moor B, Rouzé P, Rombauts S (2002) PlantCARE: a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res 30:325–327
Levi A, Panta GR, Parmentier CM, Muthalif MM, Arora R, Shanker S, Rowland LJ (1999) Complementary DNA cloning, sequencing and expression of an unusual dehydrin from blueberry floral buds. Physiol Plant 107:98–109
Lim CC, Krebs SL, Arora R (1999) A 25-kDa dehydrin associated with genotype- and age-dependent leaf freezing-tolerance in Rhododendron: a genetic marker for cold hardiness? Theor Appl Genet 99:912–928
Marian CO, Krebs SL, Arora R (2004) Dehydrin variability among Rhododendron species: a 25-kDa dehydrin is conserved and associated with cold acclimation across diverse species. New Phytol 161:773–780
Moraga P, Escobar R, Valenzuela S (2006) Resistance to freezing in three Eucalyptus globulus Labill subspecies. Electron J Biotechnol 9:310–314
Mouillon J-M, Gustafsson P, Harryson P (2006) Structural investigation of disordered stress proteins. Comparison of full-length dehydrins with isolated peptides of their conserved segments. Plant Physiol 141:638–650
Muthalif MM, Rowland LJ (1994) Identification of dehydrin-like proteins responsive to chilling in floral buds of blueberry (Vaccinium, section Cyanococcus). Plant Physiol 104:1439–1447
Navarro M, Ayax C, Martinez Y, Laur J, Kayal WE, Marque C, Teulieres C (2010) Two EguCBF1 genes overexpressed in Eucalyptus display a different impact on stress tolerance and plant development. Plant Biotechnol J 9:50–63
Ohno R, Takumi S, Nakamura C (2003) Kinetics of transcript and protein accumulation of a low-molecular-weight wheat LEA D-11 dehydrin in response to low temperature. J Plant Physiol 160:193–200
Peng Y, Reyes JL, Wei H, Yang Y, Karlson D, Covarrubias AA, Krebs SL, Fessehaie A, Arora R (2008) RcDhn5, a cold acclimation- responsive dehydrin from Rhododendron catawbiense rescues enzyme activity from dehydration effects in vitro and enhances freezing tolerance in RcDhn5-overexpressing Arabidopsis plants. Physiol Plant 134:583–597
Porat R, Pavoncello D, Lurie S, McCollum GT (2002) Identification of a grapefruit cDNA belonging to a unique class of citrus dehydrins and characterization of its expression patterns under temperature stress conditions. Physiol Plant 115:598–603
Porat R, Pasentsis K, Rozentzvieg D, Gerasopoulos D, Falara V, Samach A, Lurie S, Kanellis AK (2004) Isolation of a dehydrin cDNA from orange and grapefruit citrus fruit that is specifically induced by the combination of heat followed by chilling temperatures. Physiol Plant 120:256–264
Rasmussen-Poblete S, Valdés J, Gamboa M, Valenzuela P, Krauskopf E (2008) Generation and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditions. Electron J Biotechnol 11:2
Raynal M, Gaubier P, Grellet F, Delseny M (1990) Nucleotide sequence of a radish cDNA clone coding for a late embryogenesis abundant (LEA) protein. Nucleic Acids Res 18:6132
Reyes JL, Campos F, Wei H, Arora R, Yang Y, Karlson DT, Covarrubias AA (2008) Functional dissection of hydrophilins during in vitro freeze protection. Plant Cell Environ 31:1781–1790
Rinne PL, Kaikuranta PL, van der Plas LH, van der Schoot C (1999) Dehydrins in cold-acclimated apices of birch (Betula pubescens Ehrh.): production, localization and potential role in rescuing enzyme function during dehydration. Planta 209:377–388
Rorat T, Grygorowicz WJ, Irzykowski W, Rey P (2004) Expression of KS-type dehydrins is primarily regulated by factors related to organ type and leaf developmental stage during vegetative growth. Planta 218:878–885
Rowland LJ, Panta GR, Mehra S, Parmentier-Line C (2004) Molecular genetic and physiological analysis of the cold-responsive dehydrins of blueberry. J Crop Improv 10:53–76
Sarnighausen E, Karlson DT, Zeng Y, Goldsvrough PB, Raghothama KG, Ashworth EN (2004) Characterization of novel YnSKn class of dehydrin-like cDNAs from cold acclimated red-osier dogwood (Cornus sericea L.) xylem. In: Arora R (ed) Adaptations and responses of woody plants to environmental stresses. The Haworth Press, Binghamton, pp 17–35
Teulieres C, Marque C (2007) Eucalyptus. Biotechnol Agric For 60(Section II):387–406
Thomashow MF (1999) Plant cold acclimation: freezing tolerance genes and regulatory mechanisms. Annu Rev Plant Physiol Plant Mol Biol 50:571–599
Travert S, Valeria L, Fourasté I, Boudet AM, Teuliéres C (1997) Enrichment in specific soluble sugars of two Eucalyptus cell suspension cultures by various treatments enhances their frost tolerance via a non colligative mechanism. Plant Physiol 114:1433–1442
Tunnacliffe A, Wise MJ (2007) The continuing conundrum of the LEA proteins. Naturwissenschaften 94:791–812
Ueda EKM, Gout PW, Morganti L (2003) Current and prospective applications of metal ion-protein binding. J Chromatogr 988:1–23
Wachowiak W, Balk P, Savolainen O (2009) Search for nucleotide diversity patterns of local adaptation in dehydrins and other cold-related candidate genes in Scots pine (Pinus sylvestris L.). Tree Genet Genomes 5:117–132
Wang W, Vignani R, Scali M, Cresti M (2006) A universal and rapid protocol for protein extraction from recalcitrant plant tissues for proteomic analysis. Electrophoresis 27:2782–2786
Wei H, Dhanaraj AL, Rowland LJ, Fu Y, Krebs SL, Arora R (2005) Comparative analysis of expressed sequence tags (ESTs) from cold-acclimated and non-acclimated leaves of Rhododendron catawbiense Michx. Planta 221:406–416
Welling A, Rinne P, Vihera-Aarnio A, Kontunen-Soppela S, Heino P, Palva ET (2004) Photoperiod and temperature differentially regulate the expression of two dehydrin genes during overwintering of birch (Betula pubescens Ehrh.). J Exp Bot 55:507–516
Wisniewski M, Close TJ, Artlip T, Arora R (1996) Seasonal patterns of dehydrins and 70-kDa heat-shock proteins in bark tissues of eight species of woody plants. Physiol Plant 96:496–505
Wisniewski ME, Webb R, Balsamo R, Close TJ, Yu-Xiao M, Griffith M (1999) Purification, immunolocalization, cryoprotective, and antifreeze activity of PCA60: a dehydrin from peach (Prunus persica). Physiol Plant 105:600–608
Wisniewski ME, Bassett C, Renaut J et al (2006) Differential regulation of two dehydrin genes from peach (Prunus persica) by photoperiod, low temperature and water deficit. Tree Physiol 26:575–584
Wisniewski M, Bassett C, Norelli J, Macarisin D, Artlip T, Gasic K, Korban S (2008) Expressed sequence tag analysis of the response of apple (Malus × domestica ‘Royal Gala’) to low temperature and water deficit. Physiol Plant 133:298–317
Yakubov B, Barazani O, Shachack A, Rowland LJ, Shoseyov O, Golan-Goldhirsh A (2005) Cloning and expression of a dehydrin-like protein from Pistacia vera L. Trees 19:224–230
Acknowledgments
The authors would like to thank Dr. Leon Bravo, Valeria Neira, Claudia Flores, and Daniela Salgado for their assistance in the establishment of growth chambers assays. The authors would also like to express their appreciation to Forestal Mininco S.A for providing the plant material, a grant from MECESUP, and a scholarship from Conicyt for the financial support to MF, including a research visit to Dr. Rajeev Arora's lab at Iowa State University. This research was supported by Genomica Forestal, grant from CORFO 05CTE04-03 and partially by Conicyt (grant no. 24100220).
Author information
Authors and Affiliations
Corresponding author
Additional information
Communicated by R. Sederoff
Electronic supplementary material
Below is the link to the electronic supplementary material.
Table S1
Description of three DHN sequences found in the cDNA library prepared from plants of E. globulus subjected to low temperature (nonfreezing) condition. Accession numbers of EuglDHNs nucleotide sequences are listed. The number of deduced amino acids residue, the protein pI, and the molecular weight of each EuglDHN protein are shown (DOC 31 kb)
Table S2
The collection of cis-regulatory elements in the promoter of three dehydrin genes of E. globulus (DOC 33.0 kb)
Supplementary Fig. S1
SDS-PAGE (12.5%) of protein extract from freezing-resistant and -sensitive genotypes during NA nonacclimated, CABF cold acclimated before night frost, CAAF cold acclimated after night frost, and DA deacclimated. Arrows indicate the relative migration of five peptides identified by western blot analysis. a Protein extract from leaf tissue in the upper panel and stem. b Protein extract from stem tissue in the lower panel (DOC 226 kb)
Rights and permissions
About this article
Cite this article
Fernandez, M., Valenzuela Águila, S., Arora, R. et al. Isolation and characterization of three cold acclimation-responsive dehydrin genes from Eucalyptus globulus . Tree Genetics & Genomes 8, 149–162 (2012). https://doi.org/10.1007/s11295-011-0429-8
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11295-011-0429-8