Skip to main content
Log in

Quantification and Molecular Characterization of Norovirus After Two Wastewater Treatment Procedures

  • Published:
Water, Air, & Soil Pollution Aims and scope Submit manuscript

Abstract

Detection, molecular characterization, and quantification of Norovirus (NoVs) in a semi-industrial pilot plant were performed in order to assess the efficiency of the secondary biological treatment using two different procedures: natural oxidation ponds and biodisks. A total of 102 wastewater samples were collected from two biological treatment processes in a semi-industrial pilot plant. NoVs GII and NoVs GI were detected and quantified in 65 % (n = 66) and in 1 % (n = 1) of the samples of wastewater from the plant, respectively. The average values of viral content (genome copies/μl) obtained in the effluent of the two lines of treatment showed a substantial reduction in the prevalence and in the viral content of NoVs GII detected from one basin to another of the five watersheds of the oxidation ponds and at the expiration of the biodisk line. The predominant genogroup of NoVs was NoVs GII (65 %), followed by NoVs GI (1 %). The predominant genotype of NoVs GII was GGII.12 (n = 11), followed by GGII.b (n = 1), GGII.1 (n = 1), and GGII.16 (n = 1) and two mixed combinations: GGI.2/GGII.12 (n = 5) and GGI.2/GGII.b (n = 1) were identified. The results obtained in this study represent the first documentation in Tunisia on the effectiveness of biological treatment for the removal of NoVs in the area of the capital of Tunis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Al-Mashhadani, M. N., Nakagomi, O., Dove, W., Ahmed, H., Nakagomi, T., Hart, C. A., & Cunliffe, N. A. (2008). Norovirus gastroenteritis among children in Iraqi Kurdistan. Journal of Medical Virology, 80, 506–509.

    Article  CAS  Google Scholar 

  • Atmar, R. L. (2010). Noroviruses-State of the Art. Food Environmental Virology, 2(3), 117–126.

    Article  Google Scholar 

  • Atmar, R. L., Neil, F. H., & Le Guyader, F. C. (2011). Detection of human Caliciviruses in fecal samples by RT-PCR. Methods in Molecular Biology, 665, 39–50.

    CAS  Google Scholar 

  • Bellilot, G., Kamel, A. H., Estinney, M., Ambert-Balay, K., & Pothier, P. (2010). Evidence of emergence of new GII.4 norovirus variants from gastroenteritis outbreak survey in France during the 2007-to-2008 and 2008-to-2009 winter seasons. Journal of Clinical Microbiology, 48(3), 994–998.

    Article  Google Scholar 

  • Calqua, B., Fumian, T., Russiñol, M., Rodriguez-Manzano, J., Mbayed, V. A., Bofill-Mas, S., Miagostovich, M., & Girones, R. (2013). Detection and quantification of classic and emerging viruses by skimmed-milk flocculation and PCR in river water from two geographical areas. Water Research, 47(8), 2797–2810.

    Article  Google Scholar 

  • CDC. (2013). Emergence of new norovirus strain GII.4 Sydney—United States 2012. MMWR. Morbidity and Mortality Weekly Report, 62(3), 55.

    Google Scholar 

  • Da Silva, A. K., Le Saux, J. C., Parnaudeau, S., Pommepuy, M., Elimelech, M., & Le Guyader, F. S. (2007). Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: different behaviors of genogroups I and II. Applied and Environmental Microbiology, 73, 7891–7897.

    Article  Google Scholar 

  • Desai, R., Henbree, C. D., Handel, A., Mattwess, J. E., Dickey, B. W., McDonald, S., Hall, A. J., Parashar, U. D., Leon, J. S., & Lopman, B. (2012). Severe outcomes are associated with genogroup 2 genotype 4 norovirus outbreaks: a systematic literature review. Clinical Infectious Diseases, 55(2), 189–193.

    Article  Google Scholar 

  • El-Amri, D. E., Aouni, M., Panaudeau, S., & Le Guyader, F. S. (2006). Detection of human enteric viruses in selfish collected in Tunisia. Letters in Applied Microbiology, 43(4), 399–404.

    Article  CAS  Google Scholar 

  • EPA. (1992). Environmental protection agency: standard for the disposal of sewage sludge. In Federal Register part 503, 9387–9404

  • Fernández, M. D., Torres, C., Poma, H. R., Riviello-López, G., Martinez, L. C., Cisterna, D. M., Rajal, V. B., Nates, S. V., & Mbayed, V. A. (2012). Environmental surveillance of norovirus in Argentina revealed distinct viral diversity patterns, seasonality and spatio-temporal diffusion processes. Science of the Total Environment, 15(437), 262–269.

    Article  Google Scholar 

  • Fuentes, C., Guix, S., Pérez-Rodriguez, F. J., Fuster, N., Carol, M., Pintó, R. M., & Bosch, A. (2014). Standardized multiplex one-step qRT-PCR for hepatitis A virus, norovirus GI and GII quantification in Bivalve mollusks and water. Food Microbiology, 40, 55–63.

    Article  CAS  Google Scholar 

  • Franck, K. T., Fonager, J., Ersbøll, A. K., & Böttiger, B. (2014). Norovirus epidemiology in community and health care settings and association with patient age, denmark. Emerging Infectious Diseases, 20(7), 1123–1131.

    Article  Google Scholar 

  • Gould, L. H., Walsh, K. A., Vieira, A. R., Herman, K., Williams, I. T., Hall, A. J., Cole, D., & Division of Foodborne, Waterborne and Environmental Diseases, National Center for Emerging and Zoonotic Infectious Diseases. (2013). Surveillance for foodborne disease outbreaks—United States, 1998–2008. M M W R Surveillance Summaries, 62(2), 1–34.

    Google Scholar 

  • Hassen, A., Jedidi, N., Kallali, H., Ferchichi, M., Ghrabi, A., Chebbi, F., Saidi, N., Shayeb, H., & Ennabli, M. (1994). Elimination des indicateurs et des métaux lourds au cours de traitement des eaux usées domestiques dans une station pilote semi-industrielle. Science Technology de l’Eau, 27(4), 34–41.

    CAS  Google Scholar 

  • Hassine-Zaafrane, M., Sdiri-Loulizi, K., Kaplon, J., Ben Salem, I., Pothier, P., Aouni, M., & Ambert-Balay, K. (2014). Molecular detection of human Noroviruses in influent and effluent samples from two biological sewage treatment plants in the region of Monastir, Tunisia. Food Environmental Virology, 6, 125–131.

    Article  CAS  Google Scholar 

  • Hassine-Zaafrane, M., Sdiri-Loulizi, K., Kaplon, J., Salem, I. B., Pothier, P., Aouni, M., & Ambert-Balay, K. (2013). Prevalence and genetic diversity of norovirus infection in Tunisian children (2007–2010). Journal of Medical Virology, 85(6), 1100–1110.

    Article  CAS  Google Scholar 

  • He, X. Q., Cheng, L., Zhang, D. Y., Xie, X. M., Wang, D. H., & Wang, Z. (2011). One-year monthly survey of rotavirus, astrovirus and norovirus in three sewage treatment plants (STPs) in Beijing, China and associated health risk assessment. Water Science and Technology, 64(6), 1202–1210.

    Article  CAS  Google Scholar 

  • Iwai, M., Hasegawa, S., Obara, M., Nakamura, K., Horimoto, E., Takizawa, T., Kurata, T., Sogen, S., & Shiraki, K. (2009). Continuous presence of noroviruses and saporoviruses in raw sewage reflects infections among inhabitants of Toyama, Japan (2006 to 2008). Applied and Environmental Microbiology, 75(5), 1264–1270.

    Article  CAS  Google Scholar 

  • Jothikumar, N., Lowther, J. A., Henshilwood, K., Lees, D. N., Hill, V. R., & Vinjé, J. (2005). Rapid and sensitive detection of noroviruses by using TaqMan based one-step reverse transcription-PCR assays and application to naturally contaminated shellfish samples. App Environmental Microbiology, 71(4), 1870–1875.

    Article  CAS  Google Scholar 

  • Kageyama, T., Shinohara, M., Uchida, K., Fukushi, S., Hoshino, F. B., Kojima, S., Takai, R., Oka, T., Takeda, N., & Katayama, K. (2004). Coexistence of multiple genotypes, including newly identified genotypes, in outbreaks of gastroenteritis due to norovirus in Japan. Journal of Clinical Microbiology, 42, 2988–2995.

    Article  CAS  Google Scholar 

  • Kim, A.N., Park, S.Y., Bae, S.C., Oh, M.H., Ha, S.D. (2014). Survival of Norovirus surrogate on various food-contact surfaces. Food Environ Virol PMID:24919545

  • Kittigul, L., Panjangampatthana, A., Pombubpa, K., Taweekate, Y., Pungchitton, S., Diraphat, P., & Siripanichgon, K. (2012). Detection and genetic characterization of norovirus in environmental water samples in Thailand. Southeast Asian Journal of Tropical Medicine and Public Health, 43(2), 323–332.

    CAS  Google Scholar 

  • Kojima, S., Kageyama, T., Fukushi, S., Hoshino, F. B., Shinohara, M., Uchida, K., Natori, K., Takeda, N., & Katayama, K. (2002). Genogroup-specific PCR primers for detection of Norwalk-like viruses. Journal of Virological Methods, 100(1–2), 107–114.

    Article  CAS  Google Scholar 

  • Kokkinos, P., Ziros, P., Meri, D., Filippidou, S., Kolla, S., Galanis, A., Vantarakis, A., & Environmental surveillance. (2011). An additional/alternative approach for virological surveillance in Greece? International Journal of Environmental Research and Public Health, 8(6), 1914–22.

    Article  Google Scholar 

  • La Rosa, G., Laconelli, M., Pourshaban, M., & Muscillo, M. (2010a). Detection and molecular characterization of noroviruses from five sewage treatment plants in central Italy. Water Research, 44(6), 1777–84.

    Article  Google Scholar 

  • La Rosa, G., Pourshaban, M., Iaconelli, M., & Muscillo, M. (2010b). Quantitative real-time of enteric viruses in influent and effluent samples from wastewater treatment plants in Italy. Annals Ist Super Sanita, 46(3), 266–273.

    Google Scholar 

  • Layman, W. H., Walsh, J. F., Kotch, J. B., Weber, D. J., Gunn, E., & Vinjé, J. (2009). Prospective study of etiologic agents of acute of gastroenteritis outbreaks in child care centers. Journal de Pediatria, 154(2), 253–257.

    Article  Google Scholar 

  • Lee, G. C., Jheonq, W. H., Junq, G. S., Oh, S. A., Kim, M. J., Rhee, O. J., ParK, S., & Lee, C. H. (2012). Detection and molecular characterization of human noroviruses in Korean groundwater between 2008 and 2010. Food Environmental Virology, 4(3), 115–23.

    Article  CAS  Google Scholar 

  • Lewis, G. D., & Melcaft, T. G. (1988). Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and Human Rotavirus, from oyster, water and sediment samples. Applied and Environmental Microbiology, 54, 1983–1988.

    CAS  Google Scholar 

  • Lopman, B., Gastañaduy, P., Park, G. W., Hall, A. J., Parashar, U. D., & Vinjé, J. (2012). Environmental transmission of norovirus gastroenteritis. Current Opinion Virology, 2(1), 96–102.

    Article  Google Scholar 

  • Martella, V., Lorusso, E., Decaro, N., Elia, G., Radogna, A., D’Abramo, M., Desario, C., Cavalli, A., Corrente, M., Camero, M., Germinanio, C. A., Banyai, K., Di Martino, B., Marsilio, F., Carmichael, L. E., & Buonavoglia, C. (2008). Detection and molecular characterization of a canine norovirus. Emerging Infectious Diseases, 14, 1306–1308.

    Article  Google Scholar 

  • Maunula, L., Söderberg, K., Vahtera Vuorilehto, V. P., von Bonsdorff, C. H., Valtari, M., Laakso, T., & Lahti, K. (2012). Presence of Human noro-and adenoviruses in river and treated wastewater, a longitudinal study and method comparison. Journal of Water and Health, 10(1), 87–99.

    Article  Google Scholar 

  • Miagostovisch, M. P., Ferreira, F. F., Guimaraes, F. R., Fumian, T. M., Dniz-Mends, L., Luz, S. L., Silvia, L. A., & Leite, J. P. (2008). Molecular detection and characterization of gastroenteritis viruses occurring naturally in the stream waters of Manaus, central Amazonia, Brazil. Applied and Environmental Microbiology, 74(2), 375–82.

    Article  Google Scholar 

  • Moyo, S., Hanevik, K., Blomberg, B., Kommedal, O., Vainio, K., Maselle, S., & Langeland, N. (2014). Genetic diversity of norovirus in hospitalized diarrhoeic children and asymptomatic controls in Dar Es Salaam, Tanzania. Infection, Genetics and Evolution, 26C, 340–347.

    Article  Google Scholar 

  • Nordgren, J., Matussek, A., Mattsson, A., Svensson, L., & Lindgren, P. E. (2009). Prevalence of norovirus and factors influencing virus concentrations during 1 year in a full-scale wastewater treatment plant. Water Research, 43(4), 1117–1125.

    Article  CAS  Google Scholar 

  • Papaventsis, D. C., Dove, W., Cunliffe, N. A., Nakagomi, O., Combe, P., Grosjean, P., & Hart, C. A. (2007). Norovirus infection in children with acute gastroenteritis, Madagascar, 2004–2005. Emerging Infectious Diseases, 13, 908–911.

    Article  CAS  Google Scholar 

  • Patel, M. M., Widdowson, M. A., Glass, R. I., Akazawa, K., Vinjé, J., & Parashar, U. D. (2008). Systematic literature review of the role of noroviruses in sporadic gastroenteritis. Emerging Infectious Diseases, 14, 1224–1231.

    Article  Google Scholar 

  • Prado, T., Silva, D. M., Guilayn, W. C., Rose, T. L., Gaspar, A. M., & Miagostovish, M. P. (2011). Quantification and molecular characterization of enteric viruses detected in effluents from two hospital wastewater treatment plants. Water Research, 45(3), 1287–1297.

    Article  CAS  Google Scholar 

  • Rodier, (1978). L’analyse de l’eau. Eaux naturelles, eaux résiduaires, eaux de mer. 6th Édn, Dunod, Paris, ISBN: 2100496360, 1383.

  • Rodriguez-Diaz, J., Querales, L., Caraballo, L., Vizzi, E., Liprandi, F., Takiff, H., & Betancourt, W. Q. (2009). Detection and characterization of waterborne gastroenteritis viruses in urban sewage and sewage polluted river waters in Caracas, Venezuela. Application Environmental Microbiology, 75(2), 387–94.

    Article  CAS  Google Scholar 

  • Rutjes, S. A., Van Der Berg, H. H., Lodder, W. J., & de Roda Husman, A. M. (2006). Real-time detection of noroviruses in surface water by use of a broadly reactive nucleic acid-sequence-based amplification assay. Applied and Environmental Microbiology, 72(8), 5349–58.

    Article  CAS  Google Scholar 

  • Sdiri-Loulizi, K., Hassine, M., Ouni, Z., Gharbi-Khelifi, H., Chouchane, S., Sakly, N., Neji-Guédiche, M., Pothier, P., Ouni, M., & Ambert-Balay, K. (2010). Detection and molecular characterization of enteric viruses in environmental samples in Monastir, Tunisia, between January 2003 and April 2007. Journal of Applied Microbiology, 109, 1093–1104.

    Article  CAS  Google Scholar 

  • Sdiri-Loulizi, K., Ambert-Balay, K., Gharbi-Khelifi, H., Sakly, N., Hassine, M., Chouchane, S., Guediche, M. N., Pothier, P., & Aouni, M. (2009). Molecular epidemiology of Norovirus gastroenteritis investigated using samples collected from children in Tunisia during a 4-year period: detection of the Norovirus variant GGII.4 as early as January 2003. Journal of Clinical Microbiology, 47(2), 421––429.

    Article  Google Scholar 

  • Sdiri-Loulizi, K., Gharbi-Khelifi, H., De Rougemont, A., Ouni, Z., Chouchane, S., Sakly, N., Ambert-Balay, K., Hassine, M., Neji-Guédiche, M., Ouni, M., & Pothier, P. (2008). Acute infantile gastroenteritis associated with human enteric viruses in Tunisia. Journal of Clinical Microbiology, 46(4), 1349–1355.

    Article  Google Scholar 

  • Sima, L. C., Schaefffer, J., Le Saux, J. C., Parnaudeau, S., Elimelech, M., & Le Guyader, F. S. (2011). Calicivirus removal in a membrane bioreactor wastewater treatment plant. Applied and Environmental Microbiology, 77(15), 5170–5177.

    Article  CAS  Google Scholar 

  • Stals, A., Uyttendaele, M., Baert, L., & Van Coilie, E. (2013). Norovirus transfer between foods and food contact materials. Journal Food Production, 76(7), 1202–1209.

    Article  Google Scholar 

  • Thongprachum, A., Khamrin, P., Chan-It, W., Malasao, R., Chaimangkol, N., Okitsu, S., Mizuguchi, M., Maneekarn, N., Hayakawa, S., & Ushijima, H. (2013). Emergence of norovirus GII/4 2006a and 2006b variants in hospitalized children with acute gastroenteritis in Thailand. Clinical Laboratory, 59(3–4), 271–276.

    CAS  Google Scholar 

  • Tian, G., Jin, M., Li, H., Li, Q., Wang, J., & Duan, Z. J. (2014). Clinical characteristics and genetic diversity of noroviruses in adults with acute gastroenteritis in Beijing, China in 2008–2009. Journal of Medical Virology, 86(7), 1235–1242.

    Article  Google Scholar 

  • Van Beek, J., Ambert-Balay, K., Botteldoorn, N., Eden, J., Fonager, J., Hewitt, J., Iritani, N., Kroneman, A., Vennema, H., Vinjé, J., White, P. A., Koopmans, M., & NoroNet. (2013). Indications for worldwide increased norovirus activity associated with the emergence of a new variant of genotype II.4 late 2012. Euro Surveillance, 18(1), 8–9.

    Google Scholar 

  • Van den Berg, H., Lodder, W., van der Poel, W., Vennema, H., & de Roda Husman, A. M. (2005). Genetic diversity of noroviruses in raw and treated sewage water. Research in Microbiology, 156(4), 532–540.

    Article  Google Scholar 

  • Vinjé, J., Hamidjaja, R. A., & Sobsey, M. D. (2004). Development and application of a capsid VP1 (region D) based reverse transcription PCR assay for genotyping of genogroupe I and II noroviruses. Journal of Medical Virology, 116, 109–117.

    Google Scholar 

  • Vinjé, J., & Koopmans, M. P. (1996). Molecular detection and epidemiology of small round-structured viruses in outbreaks of gastroenteritis in the Netherlands. Journal of Infectious Diseases, 174, 610–615.

    Article  Google Scholar 

  • Wilkes, G., Brassard, J., Edge, T. A., Gannon, V., Gottschall, N., Jokinen, C. C., Jones, T. H., Khan, I. U., Marti, R., Sunohara, M. D., Topp, E., & Lapen, D. R. (2014). Long-Term monitoring of waterborne pathogens and microbial source tracking markers in paired agricultural watersheds under controlled and conventional tile drainage management. Applied and Environmental Microbiology, 80(12), 3708–3720.

    Article  CAS  Google Scholar 

  • Wyn-Jones, A. P., Carducci, A., Cook, N., D’Agostino, M., Divizia, M., Fleischer, J., Gantzer, C., Gawler, A., Girones, R., Höller, C., de Roda Husman, A. M., Kay, D., Kozyra, I., López-Pila, J., Muscillo, M., Nascimento, M. S., Papageorgiou, G., Rutjets, S., Sellwood, J., Szewzyk, R., & Wyer, M. (2011). Surveillance of adenoviruses and noroviruses in European recreational waters. Water Research, 45(3), 1025–1038.

    Article  CAS  Google Scholar 

  • Yang, N., Qi, H., Wong, M. M., Wu, R. S., & Kong, R. Y. (2012). Prevalence and diversity of norovirus genogroups I and II in Hong Kong marine waters and detection by real-time PCR. Marine Pollution Bulletin, 64(1), 164–168.

    Article  CAS  Google Scholar 

  • Zheng, D. P., Ando, T., Fankhauser, R. L., Beard, R. S., Glass, R. I., & Monroe, S. S. (2006). Norovirus classification and proposed strain nomenclature. Virology, 346, 312–323.

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This study is jointly supported by the Laboratory of National Center of Enteric Viruses (Dijon, France) and by the Tunisian Ministry of Higher Education and Scientific Research within the contract program (2010–2013). We are also grateful to our friends and colleagues, French and Tunisian, for their encouragement and support during the progress of this study.

Conflict of Interest

The authors declare that they have no conflicts of interests.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Chourouk Ibrahim.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Ibrahim, C., Cherif, N., Hammami, S. et al. Quantification and Molecular Characterization of Norovirus After Two Wastewater Treatment Procedures. Water Air Soil Pollut 226, 187 (2015). https://doi.org/10.1007/s11270-015-2402-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s11270-015-2402-x

Keywords

Navigation