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Characterization and complete genome sequence analysis of Staphylococcus aureus bacteriophage SA12

Abstract

Staphylococcus aureus is a well-known pathogen that causes several serious diseases in humans and animals. As part of the efforts to control this pathogen, a newly isolated bacteriophage, SA12, which specifically targets S. aureus, was characterized, and its genome was completely sequenced. Host range and bacteriophage challenge tests demonstrated its specific and efficient host lysis of S. aureus. The genome of phage SA12 consists of 42,902 bp length double-stranded DNA with 58 predicted ORFs-encoding phage structure, DNA manipulation, packaging, host lysis, and regulation proteins. The characterization and genome study of phage SA12 in this report is useful for understanding S. aureus-targeting bacteriophages and provides basic information for the further development of phage-based biocontrol agents against S. aureus.

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References

  1. S. ÓFlaherty, R.P. Ross, W. Meaney, G.F. Fitzgerald, M.F. Elbreki, A. Coffey, Appl. Environ. Microb. 71, 1836–1842 (2005)

    Article  Google Scholar 

  2. M.M. Dinges, P.M. Orwin, P.M. Schlievert, Clin. Microbiol. Rev. 13, 16–34 (2000)

    PubMed  Article  CAS  Google Scholar 

  3. Bowersox J., NIH 1999-05-27 (2007)

  4. M. Barber, J. Clin. Pathol. 14, 385–393 (1961)

    PubMed  Article  CAS  Google Scholar 

  5. S.E. Hsieh, H.H. Lo, S.T. Chen, M.C. Lee, Y.H. Tseng, Appl. Environ. Microb. 77, 756–761 (2011)

    Article  CAS  Google Scholar 

  6. P.R. Hsueh, C.Y. Liu, K.T. Luh, Emerg. Infect. Dis. 8, 132–137 (2002)

    PubMed  Article  Google Scholar 

  7. P.R. Hsueh, L.J. Teng, W.H. Chen, H.J. Pan, M.L. Chen, S.C. Chang, K.T. Luh, F.Y. Lin, Antimicrob. Agents 48, 1361–1364 (2004)

    Article  CAS  Google Scholar 

  8. J.L. Wang, S.P. Tseng, P.R. Hsueh, K. Hiramatsu, Emerg. Infect. Dis. 10, 1702–1704 (2004)

    PubMed  Article  Google Scholar 

  9. G. Xia, R.M. Corrigan, V. Winstel, C. Goerke, A. Grundling, A. Peschel, J. Bacteriol. 193, 4006–4009 (2011)

    PubMed  Article  CAS  Google Scholar 

  10. C. Weidenmaier, J.F. Kokai-Kun, S.A. Kristian, T. Chanturiya, H. Kalbacher, M. Gross, G. Nicholson, B. Neumeister, J.J. Mond, A. Peschel, Nat. Med. 10, 243–245 (2004)

    PubMed  Article  CAS  Google Scholar 

  11. B. Becker, N. de la Fuente, M. Gassel, D. Gunther, P. Tavares, R. Lurz, T.A. Trautner, J.C. Alonso, J. Mol. Biol. 268, 822–839 (1997)

    PubMed  Article  CAS  Google Scholar 

  12. A.C. Steven, B.L. Trus, J.V. Maizel, M. Unser, D.A. Parry, J.S. Wall, J.F. Hainfeld, F.W. Studier, J. Mol. Biol. 200, 351–365 (1988)

    PubMed  Article  CAS  Google Scholar 

  13. G.E. Christie, A.M. Matthews, D.G. King, K.D. Lane, N.P. Olivarez, S.M. Tallent, S.R. Gill, R.P. Novick, Virology 407, 381–390 (2010)

    PubMed  Article  CAS  Google Scholar 

  14. A. Guasch, A. Parraga, J. Pous, J.M. Valpuesta, J.L. Carrascosa, M. Coll, FEBS Lett. 430, 283–287 (1998)

    PubMed  Article  CAS  Google Scholar 

  15. L.W. Black, Annu. Rev. Microbiol. 43, 267–292 (1989)

    PubMed  Article  CAS  Google Scholar 

  16. A. Bateman, N.D. Rawlings, Trends Biochem. Sci. 28, 234–237 (2003)

    PubMed  Article  CAS  Google Scholar 

  17. B. Son, J. Yun, J.A. Lim, H. Shin, S. Heu, S. Ryu, BMC Microbiol. 12, 33 (2012)

    PubMed  Article  CAS  Google Scholar 

  18. R. Young, U. Blasi, FEMS Microbiol. Rev. 17, 191–205 (1995)

    PubMed  Article  CAS  Google Scholar 

  19. Z.H. Ye, C.Y. Lee, J. Bacteriol. 175, 1095–1102 (1993)

    PubMed  CAS  Google Scholar 

  20. M. Ptashne, K. Backman, M.Z. Humayun, A. Jeffrey, R. Maurer, B. Meyer, R.T. Sauer, Science 194, 156–161 (1976)

    PubMed  Article  CAS  Google Scholar 

  21. R.A. Schubert, I.B. Dodd, J.B. Egan, K.E. Shearwin, G. Dev. 21, 2461–2472 (2007)

    Article  CAS  Google Scholar 

  22. K. McNair, B.A. Bailey, R.A. Edwards, Bioinformatics 28, 614–618 (2012)

    PubMed  Article  CAS  Google Scholar 

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Acknowledgements.

This research was supported by the R&D Convergence Center Support Program, Ministry for Food, Agriculture, Forestry and Fisheries, Republic of Korea. Y. Chang and H. Shin were the recipients of a graduate fellowship provided by the MEST through the Brain Korea 21 Project. Nucleotide sequence accession number. The nucleotide sequence has been deposited in GenBank under accession number KC677663.

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Correspondence to Sangryeol Ryu.

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Y.C and J-H.L. contributed equally to this study.

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Chang, Y., Lee, JH., Shin, H. et al. Characterization and complete genome sequence analysis of Staphylococcus aureus bacteriophage SA12. Virus Genes 47, 389–393 (2013). https://doi.org/10.1007/s11262-013-0938-7

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  • DOI: https://doi.org/10.1007/s11262-013-0938-7

Keywords

  • Staphylococcus aureus
  • Bacteriophage
  • Siphoviridae
  • Host lysis
  • Genome