Abstract
Digital object identifiers (DOIs) were launched in 1997 to facilitate the long-term access and identification of objects in digital environments. The objective of the present investigation is to assess the DOI availability of articles in biomedical journals indexed in the PubMed database and to complete this investigation with a geographical analysis of journals by the country of publisher. Articles were randomly selected from PubMed using their PubMed identifier and were downloaded from and processed through developed Hypertext Preprocessor language scripts. The first part of the analysis focuses on the period 1966–2015 (50 years). Of the 496,665 articles studied over this period, 201,055 have DOIs (40.48%). Results showed that the percentage of articles with DOIs began to increase for articles published in the 2000s, with spectacular growth in the years 2002–2003, then reached a peak in 2015. Data on countries showed that some countries gradually implemented DOIs over the period 1966 to 2015 (the United States, the United Kingdom, and the Netherlands), while some did not (Russia, the Czech Republic, and Romania). The second part of the analysis focuses on the year 2015 and includes 268,790 articles published in 2015, randomly selected to evaluate the current implementation of DOIs. In 2015, 86.42% of articles had DOIs. The geographical analysis of countries of publishers showed that some countries (Russia, Thailand, and Ukraine) still assigned few DOIs to articles in 2015. Thus, if the scientific community aims to increase the number and the usefulness of services rendered by DOIs, efforts must be made to generalize their use by all persons involved in scientific publication, particularly publishers.
Similar content being viewed by others
References
ALM. (2016). Retrieved from http://alm.plos.org/.
Altmetric. (2016). Retrieved from https://www.altmetric.com/.
Boudry, C., Denion, E., Mortemousque, B., & Mouriaux, F. (2016). Trends and topics in eye disease research in PubMed from 2010 to 2014. PeerJ, 4, e1557. doi:10.7717/peerj.1557.
Boudry, C., & Mouriaux, F. (2015). Eye neoplasms research: A bibliometric analysis from 1966 to 2012. European Journal of Ophthalmology, 25(4), 357–365. doi:10.5301/ejo.5000556.
Braile, D. M. (2011). After the impact factor, the DOI. Brazilian Journal of Cardiovascular Surgery, 26(3), 1–2. doi:10.5935/1678-9741.20110001.
Brase, J., Lautenschlager, M., & Sens, I. (2015). The tenth anniversary of assigning DOI names to scientific data and a five year history of DataCite. D-Lib Magazine. doi:10.1045/january2015-brase.
Carnevale, R., & Aronsky, D. (2007). The life and death of URLs in five biomedical informatics journals. International Journal of Medical Informatics, 76(4), 269–273. doi:10.1016/j.ijmedinf.2005.12.001.
Chandrakar, R. (2006). Digital object identifier system: An overview. The Electronic Library, 24(4), 445–452. doi:10.1108/02640470610689151.
Crossref Event Data. (2016). Retrieved from http://eventdata.crossref.org/.
Crossref initiatives will support reporting to funders|Research Information. (2016). Retrieved from https://www.researchinformation.info/news/analysis-opinion/crossref-initiatives-will-support-reporting-funders.
crossref.org. (2016). Retrieved from http://www.crossref.org/.
crossref.org: :publisher fees. (2016). Retrieved from http://www.crossref.org/02publishers/20pub_fees.html.
CrossRef’s DOI Event Tracker Pilot—Crossref Blog. (2015). Retrieved from http://blog.crossref.org/2015/03/crossrefs-doi-event-tracker-pilot.html.
DeRisi, S., Kennison, R., & Twyman, N. (2003). The what and whys of DOIs. PLoS Biology, 1(2), e57. doi:10.1371/journal.pbio.0000057.
Digital Object Identifier System Handbook. (2016). Retrieved from http://www.doi.org/hb.html.
DOI display guidelines. (2016). Retrieved from http://www.crossref.org/02publishers/doi_display_guidelines.html.
Ducut, E., Liu, F., & Fontelo, P. (2008). An update on uniform resource locator (URL) decay in MEDLINE abstracts and measures for its mitigation. BMC Medical Informatics and Decision Making. doi:10.1186/1472-6947-8-23.
Falagas, M. E., Pitsouni, E. I., Malietzis, G. A., & Pappas, G. (2008). Comparison of PubMed, scopus, web of science, and google scholar: Strengths and weaknesses. The FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology, 22(2), 338–342. doi:10.1096/fj.07-9492LSF.
Franceschini, F., Maisano, D., & Mastrogiacomo, L. (2014). Errors in DOI indexing by bibliometric databases. Scientometrics, 102(3), 2181–2186. doi:10.1007/s11192-014-1503-4.
Galligan, F., & Dyas-Correia, S. (2013). Altmetrics: Rethinking the way we measure. Serials Review, 39(1), 56–61. doi:10.1080/00987913.2013.10765486.
González-Valiente, C. L., Pacheco-Mendoza, J., & Arencibia-Jorge, R. (2016). A review of altmetrics as an emerging discipline for research evaluation. Learned Publishing, 29(4), 229–238. doi:10.1002/leap.1043.
Gorraiz, J., Melero-Fuentes, D., Gumpenberger, C., & Valderrama-Zurián, J.-C. (2016). Availability of digital object identifiers (DOIs) in web of science and scopus. Journal of Informetrics, 10(1), 98–109. doi:10.1016/j.joi.2015.11.008.
Haustein, S., Costas, R., & Larivière, V. (2015). Characterizing social media metrics of scholarly papers: The effect of document properties and collaboration patterns. PLoS ONE, 10(3), e0120495. doi:10.1371/journal.pone.0120495.
Haustein, S., Peters, I., Bar-Ilan, J., Priem, J., Shema, H., & Terliesner, J. (2014). Coverage and adoption of altmetrics sources in the bibliometric community. Scientometrics, 101(2), 1145–1163. doi:10.1007/s11192-013-1221-3.
Home—NLM Catalog—NCBI. (2016). Retrieved from https://www.ncbi.nlm.nih.gov/nlmcatalog/.
Honor, L. B., Haselgrove, C., Frazier, J. A., & Kennedy, D. N. (2016). Data citation in neuroimaging: Proposed best practices for data identification and attribution. Frontiers in Neuroinformatics, 10, 34. doi:10.3339/fninf.2016.00034.
ISO 26324:2012—Information and documentation—Digital object identifier system. (2012). Retrieved from http://www.iso.org/iso/catalogue_detail.htm?csnumber=43506.
Khedmatgozar, H. R., & Alipour-Hafezi, M. (2015). A basic comparative framework for evaluation of digital identifier systems. Journal of Digital Information Management, 13(3), 191.
Neumann, J., & Brase, J. (2014). DataCite and DOI names for research data. Journal of Computer Aided Molecular Design, 28(10), 1035–1041. doi:10.1007/s10822-014-9776-5.
Park, S., Zo, H., Ciganek, A. P., & Lim, G. G. (2011). Examining success factors in the adoption of digital object identifier systems. Electronic Commerce Research and Applications, 10(6), 626–636.
Paskin, N. (1999). The digital object identifier system: Digital technology meets content management. Interlending and Document Supply, 27(1), 13–16. doi:10.1108/02641619910255829.
Paskin, N. (2010). Digital object identifier (DOI) system. Encyclopedia of Library and Information Sciences, 3, 1586–1592.
Plumx. (2015). Retrieved from https://plu.mx/.
Rasmussen, P. G., & Andersen, J. P. (2013). Altmetrics: An alternate perspective on research evaluation. ScieCom Info, 96(2). Retrieved from http://journals.lub.lu.se/index.php/sciecominfo/article/view/7292.
RECODE. (2015). Retrieved from June 13, 2016. http://policy.recodeproject.eu/publishers/policy-content/.
Rosenblatt, B. (1997). The digital object identifier: Solving the dilemma of copyright protection online. Journal of Electronic Publishing. doi:10.3998/3336451.0003.204.
RP-16-2013 PIE-J (short URL)—National Information Standards Organization. (2013). Retrieved from http://www.niso.org/publications/rp/rp-16-2013/.
Sidman, D., & Davidson, T. (2001). A practical guide to automating the digital supply chain with the digital object identifier (DOI). Publishing Research Quarterly, 17(2), 9–23. doi:10.1007/s12109-001-0019-y.
Sieck, S. (2003). Using the DOI to improve profitability in publishers’ E-Commerce operations. EPS white paper series.
Simmonds, A. W. (1999). The digital object identifier (DOI). Publishing Research Quarterly, 15(2), 10–13. doi:10.1007/s12109-999-0022-2.
Sud, P., & Thelwall, M. (2013). Evaluating altmetrics. Scientometrics, 98(2), 1131–1143. doi:10.1007/s11192-013-1117-2.
Swan, A. (2010). The open access citation advantage: Studies and results to date. Retrieved from http://eprints.ecs.soton.ac.uk/18516.
Thelwall, M., Haustein, S., Larivière, V., & Sugimoto, C. R. (2013). Do altmetrics work? Twitter and ten other social web services. PLoS ONE, 8(5), e64841. doi:10.1371/journal.pone.0064841.
Tolwinska, A. (2015). Need to know what’s going on with an article DOI? The wait is over. Science Editor, 38(3/4), 106–108.
United Nations Statistics Division-Standard Country and Area Codes Classifications (M49). (2016). Retrieved from http://unstats.un.org/unsd/methods/m49/m49regin.htm.
Valderrama-Zurián, J.-C., Aguilar-Moya, R., Melero-Fuentes, D., & Aleixandre-Benavent, R. (2015). A systematic analysis of duplicate records in Scopus. Journal of Informetrics, 9(3), 570–576. doi:10.1016/j.joi.2015.05.002.
Vardakas, K. Z., Tsopanakis, G., Poulopoulou, A., & Falagas, M. E. (2015). An analysis of factors contributing to PubMed’s growth. Journal of Informetrics, 9(3), 592–617.
Wagner, C., Gebremichael, M. D., Taylor, M. K., & Soltys, M. J. (2009). Disappearing act: Decay of uniform resource locators in health care management journals. Journal of the Medical Library Association, 97(2), 122–130. doi:10.3163/1536-5050.97.2.009.
Wang, J. (2007). Digital object identifiers and their use in libraries. Serials Review, 33(3), 161–164. doi:10.1016/j.serrev.2007.05.006.
Zotero|Home. (2016). Retrieved from https://www.zotero.org/.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Boudry, C., Chartron, G. Availability of digital object identifiers in publications archived by PubMed. Scientometrics 110, 1453–1469 (2017). https://doi.org/10.1007/s11192-016-2225-6
Received:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11192-016-2225-6