Skip to main content
Log in

Isolation and Characterization of Putative Acetyl-CoA Carboxylases in Arachis hypogaea L.

  • Published:
Plant Molecular Biology Reporter Aims and scope Submit manuscript

Abstract

Candidate genes of multisubunit (MS) and multifunctional (MF) acetyl-CoA carboxylase (ACCase) including accB1, accB2, accC, accA, accD, and MF-ACCase were isolated from peanut by sequencing a full-length cDNA library and homology-based cloning. Primary structures of peanut ACCases were highly conserved, especially biochemical function domains, compared with other higher plants and Escherichia coli. The numbers of homologs of each ACCase gene expressed in developing seed of peanut varied from two to five. Two editing sites of peanut accD were identified by comparing genomic DNA and its corresponding cDNAs. The MS-ACCase of Arachis hypogaea and Arabidopsis thaliana shared a conservative structure of gene organization. Semiquantitative reverse transcription polymerase chain reaction analysis indicated that MS-ACCase and MF-ACCase genes were expressed in all peanut tissues examined, but their mRNA expression level were quite different. In peanut seed development, accC, accA, accD, and MF-ACCase mRNAs were expressed strongly at 60 days after pegging.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8

Similar content being viewed by others

Abbreviations

ACCase:

acetyl-CoA carboxylase

MS:

multisubunit

MF:

multifunctional

BCCP:

biotin carboxyl carrier protein

BC:

biotin carboxylase

CT:

carboxyltransferase

References

  • Carra A, Gambino G, Schubert A (2007) A cetyltrimethylammonium bromide-based method to extract low-molecular-weight RNA from polysaccharide-rich plant tissues. Anal Biochem 360:318–320. doi:10.1016/j.ab.2006.09.022

    Article  CAS  PubMed  Google Scholar 

  • Chalupska D, Lee HY, Faris JD, Evrard A, Chalhoub B, Haselkorn R, Gornicki P (2008) Acc homoeoloci and the evolution of wheat genomes. Proc Natl Acad Sci U S A 105:9691–9696. doi:10.1073/pnas.0803981105

    Article  CAS  PubMed  Google Scholar 

  • Egli MA, Lutz SM, Somers DA, Gengenbach BG (1995) A maize acetyl-coenzyme A carboxylase cDNA sequence. Plant Physiol 108:1299–1300. doi:10.1104/pp.108.3.1299

    Article  CAS  PubMed  Google Scholar 

  • Elborough KM, Winz R, Deka RK, Markham JE, White AJ, Rawsthorne S, Slabas AR (1996) Biotin carboxyl carrier protein and carboxyltransferase subunits of the multi-subunit form of acetyl-CoA carboxylase from Brassica napus: cloning and analysis of expression during oilseed rape embryogenesis. Biochem J 315:103–112

    CAS  PubMed  Google Scholar 

  • Gornicki P, Faris J, King I, Podkowinski J, Gill B, Haselkorn R (1997) Plastid-localized acetyl-CoA carboxylase of bread wheat is encoded by a single gene on each of the three ancestral chromosome sets. Proc Natl Acad Sci U S A 94:14179–14184. doi:10.1073/pnas.94.25.14179

    Article  CAS  PubMed  Google Scholar 

  • Ke J, Wen TN, Nikolau BJ, Wurtele ES (2000) Coordinate regulation of the nuclear and plastidic genes coding for the subunits of the heteromeric acetyl-coenzyme A carboxylase. Plant Physiol 122:1057–1071. doi:10.1104/pp.122.4.1057

    Article  CAS  PubMed  Google Scholar 

  • Konishi T, Shinohara K, Yamada K, Sasaki Y (1996) Acetyl-CoA carboxylase in higher plants: most plants other than gramineae have both the prokaryotic and the eukaryotic forms of this enzyme. Plant Cell Physiol 37:117–122

    CAS  PubMed  Google Scholar 

  • Kozaki A, Mayumi K, Sasaki Y (2001) Thiol-disulfide exchange between nuclear-encoded and chloroplast-encoded subunits of pea acetyl-CoA Carboxylase. J Biol Chem 276:39919–39925. doi:10.1074/jbc.M103525200

    Article  CAS  PubMed  Google Scholar 

  • Lee SS, Jeong WJ, Bae JM, Bang JW, Liu JR, Harn CH (2004) Characterization of the plastid-encoded carboxyltransferase subunit (accD) gene of potato. Mol Cell 17:422–429

    CAS  Google Scholar 

  • Li SJ, Cronan JE (1992a) The genes encoding the biotin carboxylase subunits of Escherichia coli acetyl-coA carboxylase. J Biol Chem 267:855–863

    CAS  PubMed  Google Scholar 

  • Li SJ, Cronan JE (1992b) The genes encoding the two carboxyltransferase subunits of Escherichia coli acetyl-coA carboxylase. J Biol Chem 267:16841–16847

    CAS  PubMed  Google Scholar 

  • Moretzsohn MC, Hopkins MS, Mitchell SE, Kresovich S, Valls JFM, Ferreira ME (2004) Genetic diversity of peanut (Arachis hypogaea L.) and its wild relatives based on the analysis of hypervariable regions of the genome. BMC Plant Biol 4:11. doi:10.1186/1471-2229-4-11

    Article  Google Scholar 

  • Ogihara Y, Terachi T, Sasakuma T (1991) Molecular analysis of the hot spot region related to length mutations in wheat chloroplast DNAs. I. Nucleotide divergence of genes and intergenic spacer regions located in the hot spot region. Genetics 129:873–884

    CAS  PubMed  Google Scholar 

  • Podkowinski J, Sroga GE, Haselkorn R, Gornicki P (1996) Structure of a gene encoding a cytosolic acetyl-CoA carboxylase of hexaploid wheat. Proc Natl Acad Sci U S A 93:1870–1874. doi:10.1073/pnas.93.5.1870

    Article  CAS  PubMed  Google Scholar 

  • Podkowinski J, Jelenska J, Sirikhachornkit A, Zuther E, Haselkorn R, Gornicki P (2003) Expression of cytosolic and plastid acetyl-coenzyme A carboxylase genes in young wheat plants. Plant Physiol 131:763–772. doi:10.1104/pp.013169

    Article  CAS  PubMed  Google Scholar 

  • Reverdatto S, Beilinson V, Nielsen NC (1999) A multisubunit acetylcoenzyme A carboxylase from soybean. Plant Physiol 119:961–978. doi:10.1104/pp.119.3.961

    Article  CAS  PubMed  Google Scholar 

  • Roesler KR, Shorrosh BS, Ohlrogge JB (1994) Structure and expression of an Arabidopsis acetyl-coenzyme A carboxylase gene. Plant Physiol 105:611–617. doi:10.1104/pp.105.2.611

    Article  CAS  PubMed  Google Scholar 

  • Sasaki Y, Nagano Y (2004) Plant acetyl-CoA carboxylase: structure, biosynthesis, regulation, and gene manipulation for plant breeding. Biosci Biotechnol Biochem 68:1175–1184. doi:10.1271/bbb.68.1175

    Article  CAS  PubMed  Google Scholar 

  • Sasaki Y, Hakamada K, Suama Y, Nagano Y, Furusawa I, Matsuno R (1993) Chloroplast-encoded protein as a subunit of acetyl-CoA carboxylase in pea plant. J Biol Chem 268:25118–25123

    CAS  PubMed  Google Scholar 

  • Sasaki Y, Kozaki A, Ohmori A, Iguchi H, Nagano Y (2001) Chloroplast RNA editing required for functional acetyl-CoA carboxylase in plants. J Biol Chem 276:3937–3940. doi:10.1074/jbc.M008166200

    Article  CAS  PubMed  Google Scholar 

  • Schulte W, Schell J, Töpfer R (1994) A gene encoding acetyl coenzyme A carboxylase from Brassica napus. Plant Physiol 106:793–794. doi:10.1104/pp.106.2.793

    Article  CAS  PubMed  Google Scholar 

  • Schulte W, Töpfer R, Stracke R, Schell J, Martini N (1997) Multi-functional acetyl-CoA carboxylase from Brassica napus is encoded by a multi-gene family: indication for plastidic localization of at least one isoform. Proc Natl Acad Sci U S A 94:3465–3470. doi:10.1073/pnas.94.7.3465

    Article  CAS  PubMed  Google Scholar 

  • Shorrosh BS, Dixon RA, Ohlrogge JB (1994) Molecular cloning, characterization, and elicitation of acetyl-CoA carboxylase from alfalfa. Proc Natl Acad Sci U S A 91:4323–4327. doi:10.1073/pnas.91.10.4323

    Article  CAS  PubMed  Google Scholar 

  • Shorrosh BS, Roesler KR, Shintani D, van de Loo FJ, Ohlrogge JB (1995) Structural analysis, plastid localization, and expression of the biotin carboxylase subunit of acetyl-CoA carboxylase from tobacco. Plant Physiol 108:805–812. doi:10.1104/pp.108.2.805

    Article  CAS  PubMed  Google Scholar 

  • Shorrosh BS, Savage LJ, Soll J, Ohlrogge JB (1996) The pea chloroplast membrane-associated protein, IEP96, is a subunit of acetyl-CoA carboxylase. Plant J 10:261–268. doi:10.1046/j.1365-313X.1996.10020261.x

    Article  CAS  PubMed  Google Scholar 

  • Sun J, Ke J, Johnson JL, Nikolau BJ, Wurtele ES (1997) Biochemical and molecular biological characterization of CAC2, the Arabidopsis thaliana gene coding for the biotin carboxylase subunit of the plastidic acetyl-coenzyme A carboxylase. Plant Physiol 115:1371–1383. doi:10.1104/pp.115.4.1371

    Article  CAS  PubMed  Google Scholar 

  • Thelen JJ, Mekhedov S, Ohlrogge JB (2001) Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner. Plant Physiol 125:2016–2028. doi:10.1104/pp.125.4.2016

    Article  CAS  PubMed  Google Scholar 

  • Yanai Y, Kawasaki T, Shimada H, Wurtele ES, Nikolau BJ, Ichikawa N (1995) Genomic organization of 251 kDa acetyl-CoA carboxylase genes in Arabidopsis: tandem gene duplication has made two differentially expressed isozymes. Plant Cell Physiol 36:779–787

    CAS  PubMed  Google Scholar 

Download references

Acknowledgement

This work was supported by grants from the National High Technology Research and Development Program of the People’s Republic of China (2006AA10A114), Shandong Academy of Agricultural Sciences Foundation (2006YCX030 and 2007YCX001), and Postdoctoral Foundation of Shandong Province (200701004).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xing-Jun Wang.

Electronic supplementary materials

Below is the link to the electronic supplementary material.

ESM 1

(DOC 87 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Li, MJ., Xia, H., Zhao, CZ. et al. Isolation and Characterization of Putative Acetyl-CoA Carboxylases in Arachis hypogaea L.. Plant Mol Biol Rep 28, 58–68 (2010). https://doi.org/10.1007/s11105-009-0126-z

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11105-009-0126-z

Keywords

Navigation