Abstract
Key message
The maize chromatin remodeler ZmCHB101 plays an essential role in the osmotic stress response. ZmCHB101 controls nucleosome densities around transcription start sites of essential stress-responsive genes.
Abstract
Drought and osmotic stresses are recurring conditions that severely constrain crop production. Evidence accumulated in the model plant Arabidopsis thaliana suggests that core components of SWI/SNF chromatin remodeling complexes play essential roles in abiotic stress responses. However, how maize SWI/SNF chromatin remodeling complexes function in osmotic and drought stress responses remains unknown. Here we show that ZmCHB101, a homolog of A. thaliana SWI3D in maize, plays essential roles in osmotic and dehydration stress responses. ZmCHB101-RNA interference (RNAi) transgenic plants displayed osmotic, salt and drought stress-sensitive phenotypes. Genome-wide RNA-sequencing analysis revealed that ZmCHB101 impacts the transcriptional expression landscape of osmotic stress-responsive genes. Intriguingly, ZmCHB101 controls nucleosome densities around transcription start sites of essential stress-responsive genes. Furthermore, we identified that ZmCHB101 associates with RNA polymerase II (RNAPII) in vivo and is a prerequisite for the proper occupancy of RNAPII on the proximal regions of transcription start sites of stress-response genes. Taken together, our findings suggest that ZmCHB101 affects gene expression by remodeling chromatin states and controls RNAPII occupancies in maize under osmotic stress.
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Acknowledgements
This work was supported by the National Natural Science Foundation of China (#31601311 to Z-YX, #31471565 and #31170259 to XQ, #31200231 to XZ), National Key Research and Development Program of China (#2016YFD0102003-2 to Z-YX), National Transgenic Maize Project (#2014ZX0800305B to JP) and Natural Science Foundation of Jilin Province of China (#20150101086JC to MZ and #20180101233JC to Z-YX) and the Fundamental Research Fund for the Central Universities (#2412018BJ002 to Z-YX).
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Z-YX and BL devised and supervised the project. XY, Z-YX and BL designed the experiments. XY, XM, YL, T-JW, NL, AZ and LJ performed experiments and analyzed the data. JP, XZ, XQ and MZ produced transgenic maize. XY, SW, Z-YX and BL wrote the manuscript.
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Data generated in this study are deposited in the NCBI Sequence Read Archive (accession no. SRP068174).
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Yu, X., Meng, X., Liu, Y. et al. The chromatin remodeler ZmCHB101 impacts expression of osmotic stress-responsive genes in maize. Plant Mol Biol 97, 451–465 (2018). https://doi.org/10.1007/s11103-018-0751-8
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DOI: https://doi.org/10.1007/s11103-018-0751-8