Ke PY (2018) The multifaceted roles of autophagy in flavivirus-host interactions. Int J Mol Sci 19(12):3940. https://doi.org/10.3390/ijms19123940
Article
PubMed Central
Google Scholar
Sharma M, Sharma KB, Chauhan S, Bhattacharyya S, Vrati S, Kalia M (2018) Diphenyleneiodonium enhances oxidative stress and inhibits Japanese encephalitis virus induced autophagy and ER stress pathways. Biochem Biophys Res Commun 502(2):232–237. https://doi.org/10.1016/j.bbrc.2018.05.149
CAS
Article
PubMed
Google Scholar
Jin R, Zhu W, Cao S, Chen R, Jin H, Liu Y, Wang S, Wang W, Xiao G (2013) Japanese encephalitis virus activates autophagy as a viral immune evasion strategy. PLoS ONE 8(1):e52909. https://doi.org/10.1371/journal.pone.0052909
CAS
Article
PubMed
PubMed Central
Google Scholar
Lee YR, Lei HY, Liu MT, Wang JR, Chen SH, Jiang-Shieh YF, Lin YS, Yeh TM, Liu CC, Liu HS (2008) Autophagic machinery activated by dengue virus enhances virus replication. Virology 374(2):240–248. https://doi.org/10.1016/j.virol.2008.02.016
CAS
Article
PubMed
PubMed Central
Google Scholar
Sir D, Chen WL, Choi J, Wakita T, Yen TS, Ou JH (2008) Induction of incomplete autophagic response by hepatitis C virus via the unfolded protein response. Hepatology 48(4):1054–1061. https://doi.org/10.1002/hep.22464
CAS
Article
PubMed
PubMed Central
Google Scholar
Li JK, Liang JJ, Liao CL, Lin YL (2012) Autophagy is involved in the early step of Japanese encephalitis virus infection. Microbes Infect 14(2):159–168. https://doi.org/10.1016/j.micinf.2011.09.001
CAS
Article
PubMed
Google Scholar
Ghoshal A, Das S, Ghosh S, Mishra MK, Sharma V, Koli P, Sen E, Basu A (2007) Proinflammatory mediators released by activated microglia induces neuronal death in Japanese encephalitis. Glia 55(5):483–496. https://doi.org/10.1002/glia.20474
Article
PubMed
Google Scholar
Kalita J, Misra UK (2000) Comparison of CT scan and MRI findings in the diagnosis of Japanese encephalitis. J Neurol Sci 174(1):3–8
CAS
Article
Google Scholar
Saxena V, Mathur A, Krishnani N, Dhole TN (2008) An insufficient anti-inflammatory cytokine response in mouse brain is associated with increased tissue pathology and viral load during Japanese encephalitis virus infection. Arch Virol 153(2):283–292. https://doi.org/10.1007/s00705-007-1098-7
CAS
Article
PubMed
Google Scholar
Bodea LG, Wang Y, Linnartz-Gerlach B, Kopatz J, Sinkkonen L, Musgrove R, Kaoma T, Muller A, Vallar L, Di Monte DA, Balling R, Neumann H (2014) Neurodegeneration by activation of the microglial complement-phagosome pathway. J Neurosci 34(25):8546–8556. https://doi.org/10.1523/JNEUROSCI.5002-13.2014
CAS
Article
PubMed
PubMed Central
Google Scholar
Das S, Basu A (2008) Japanese encephalitis virus infects neural progenitor cells and decreases their proliferation. J Neurochem 106(4):1624–1636. https://doi.org/10.1111/j.1471-4159.2008.05511.x
CAS
Article
PubMed
Google Scholar
Mukherjee S, Singh N, Sengupta N, Fatima M, Seth P, Mahadevan A, Shankar SK, Bhattacharyya A, Basu A (2017) Japanese encephalitis virus induces human neural stem/progenitor cell death by elevating GRP78, PHB and hnRNPC through ER stress. Cell Death Dis 8(1):e2556. https://doi.org/10.1038/cddis.2016.394
CAS
Article
PubMed
PubMed Central
Google Scholar
Sharma M, Bhattacharyya S, Nain M, Kaur M, Sood V, Gupta V, Khasa R, Abdin MZ, Vrati S, Kalia M (2014) Japanese encephalitis virus replication is negatively regulated by autophagy and occurs on LC3-I- and EDEM1-containing membranes. Autophagy 10(9):1637–1651. https://doi.org/10.4161/auto.29455
CAS
Article
PubMed
PubMed Central
Google Scholar
Shukla V, Shakya AK, Shukla M, Kumari N, Krishnani N, Dhole TN, Misra UK (2016) Circulating levels of matrix metalloproteinases and tissue inhibitors of matrix metalloproteinases during Japanese encephalitis virus infection. Virusdisease 27(1):63–76. https://doi.org/10.1007/s13337-015-0301-9
Article
PubMed
PubMed Central
Google Scholar
Yang KD, Yeh WT, Chen RF, Chuon HL, Tsai HP, Yao CW, Shaio MF (2004) A model to study neurotropism and persistency of Japanese encephalitis virus infection in human neuroblastoma cells and leukocytes. J Gen Virol 85(Pt 3):635–642. https://doi.org/10.1099/vir.0.19426-0
CAS
Article
PubMed
Google Scholar
Kumar A, Barrett JP, Alvarez-Croda DM, Stoica BA, Faden AI, Loane DJ (2016) NOX2 drives M1-like microglial/macrophage activation and neurodegeneration following experimental traumatic brain injury. Brain Behav Immun 58:291–309. https://doi.org/10.1016/j.bbi.2016.07.158
CAS
Article
PubMed
PubMed Central
Google Scholar
Kyei GB, Dinkins C, Davis AS, Roberts E, Singh SB, Dong C, Wu L, Kominami E, Ueno T, Yamamoto A, Federico M, Panganiban A, Vergne I, Deretic V (2009) Autophagy pathway intersects with HIV-1 biosynthesis and regulates viral yields in macrophages. J Cell Biol 186(2):255–268. https://doi.org/10.1083/jcb.200903070
CAS
Article
PubMed
PubMed Central
Google Scholar
Ding B, Zhang G, Yang X, Zhang S, Chen L, Yan Q, Xu M, Banerjee AK, Chen M (2014) Phosphoprotein of human parainfluenza virus type 3 blocks autophagosome-lysosome fusion to increase virus production. Cell Host Microbe 15(5):564–577. https://doi.org/10.1016/j.chom.2014.04.004
CAS
Article
PubMed
Google Scholar
Faure M (2014) The p value of HPIV3-mediated autophagy inhibition. Cell Host Microbe 15(5):519–521. https://doi.org/10.1016/j.chom.2014.04.014
CAS
Article
PubMed
Google Scholar
Chauhan PS, Khanna VK, Kalita J, Misra UK (2017) Japanese Encephalitis virus infection results in transient dysfunction of memory learning and cholinesterase inhibition. Mol Neurobiol 54(6):4705–4715. https://doi.org/10.1007/s12035-016-9963-6
CAS
Article
PubMed
Google Scholar
Kalita J, Misra UK, Srivastava A (2009) Cognitive impairment in encephalitis: P3 and MRI correlation. Electromyogr Clin Neurophysiol 49(1):27–33
CAS
PubMed
Google Scholar
Misra UK, Kalita J (1997) Anterior horn cells are also involved in Japanese encephalitis. Acta Neurol Scand 96(2):114–117
CAS
Article
Google Scholar
Bjorkoy G, Lamark T, Johansen T (2006) p62/SQSTM1: a missing link between protein aggregates and the autophagy machinery. Autophagy 2(2):138–139. https://doi.org/10.4161/auto.2.2.2405
Article
PubMed
Google Scholar
Ichimura Y, Kominami E, Tanaka K, Komatsu M (2008) Selective turnover of p62/A170/SQSTM1 by autophagy. Autophagy 4(8):1063–1066. https://doi.org/10.4161/auto.6826
CAS
Article
PubMed
Google Scholar
Bjorkoy G, Lamark T, Brech A, Outzen H, Perander M, Overvatn A, Stenmark H, Johansen T (2005) p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death. J Cell Biol 171(4):603–614. https://doi.org/10.1083/jcb.200507002
CAS
Article
PubMed
PubMed Central
Google Scholar
Zhou J, Sinha RA, Lesmana R, Yau WWY, Yen PM (2018) Pharmacological inhibition of lysosomal activity as a method for monitoring thyroid hormone-induced autophagic flux in mammalian cells in vitro. Methods Mol Biol 1801:111–122. https://doi.org/10.1007/978-1-4939-7902-8_11
CAS
Article
PubMed
PubMed Central
Google Scholar
Kumar A, Loane DJ (2012) Neuroinflammation after traumatic brain injury: opportunities for therapeutic intervention. Brain Behav Immun 26(8):1191–1201. https://doi.org/10.1016/j.bbi.2012.06.008
Article
PubMed
Google Scholar
Kaushik DK, Gupta M, Kumawat KL, Basu A (2012) NLRP3 inflammasome: key mediator of neuroinflammation in murine Japanese encephalitis. PLoS ONE 7(2):e32270. https://doi.org/10.1371/journal.pone.0032270
CAS
Article
PubMed
PubMed Central
Google Scholar
Silva AR, Santos AC, Farfel JM, Grinberg LT, Ferretti RE, Campos AH, Cunha IW, Begnami MD, Rocha RM, Carraro DM, de Braganca Pereira CA, Jacob-Filho W, Brentani H (2014) Repair of oxidative DNA damage, cell-cycle regulation and neuronal death may influence the clinical manifestation of Alzheimer’s disease. PLoS ONE 9(6):e99897. https://doi.org/10.1371/journal.pone.0099897
CAS
Article
PubMed
PubMed Central
Google Scholar
Sips GJ, Wilschut J, Smit JM (2012) Neuroinvasive flavivirus infections. Rev Med Virol 22(2):69–87. https://doi.org/10.1002/rmv.712
CAS
Article
PubMed
Google Scholar
Yang S, Qiang L, Sample A, Shah P, He YY (2017) NF-kappaB signaling activation induced by chloroquine requires autophagosome, p62 protein, and c-Jun N-terminal kinase (JNK) signaling and promotes tumor cell resistance. J Biol Chem 292(8):3379–3388. https://doi.org/10.1074/jbc.M116.756536
CAS
Article
PubMed
PubMed Central
Google Scholar
Glickman MH, Ciechanover A (2002) The ubiquitin-proteasome proteolytic pathway: destruction for the sake of construction. Physiol Rev 82(2):373–428. https://doi.org/10.1152/physrev.00027.2001
CAS
Article
PubMed
Google Scholar
Choy MM, Zhang SL, Costa VV, Tan HC, Horrevorts S, Ooi EE (2015) Proteasome inhibition suppresses dengue virus egress in antibody dependent infection. PLoS Negl Trop Dis 9(11):e0004058. https://doi.org/10.1371/journal.pntd.0004058
CAS
Article
PubMed
PubMed Central
Google Scholar
Krishnan MN, Ng A, Sukumaran B, Gilfoy FD, Uchil PD, Sultana H, Brass AL, Adametz R, Tsui M, Qian F, Montgomery RR, Lev S, Mason PW, Koski RA, Elledge SJ, Xavier RJ, Agaisse H, Fikrig E (2008) RNA interference screen for human genes associated with West Nile virus infection. Nature 455(7210):242–245. https://doi.org/10.1038/nature07207
CAS
Article
PubMed
PubMed Central
Google Scholar
Wang S, Liu H, Zu X, Liu Y, Chen L, Zhu X, Zhang L, Zhou Z, Xiao G, Wang W (2016) The ubiquitin-proteasome system is essential for the productive entry of Japanese encephalitis virus. Virology 498:116–127. https://doi.org/10.1016/j.virol.2016.08.013
CAS
Article
PubMed
Google Scholar
Vivanco I, Sawyers CL (2002) The phosphatidylinositol 3-Kinase AKT pathway in human cancer. Nat Rev Cancer 2(7):489–501. https://doi.org/10.1038/nrc839nrc839[pii]
CAS
Article
PubMed
Google Scholar
Hopkins TA, Dyck JR, Lopaschuk GD (2003) AMP-activated protein kinase regulation of fatty acid oxidation in the ischaemic heart. Biochem Soc Trans 31(Pt 1):207–212. https://doi.org/10.1042/bst0310207
CAS
Article
PubMed
Google Scholar