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Prognosis of glioblastoma with faint MGMT methylation-specific PCR product

Journal of Neuro-Oncology volume 122, pages 179–188 (2015)Cite this article

Abstract

Methylation-specific polymerase chain reaction (MSP) for the promoter methylation status of O6-methylguanine-DNA-methyltranferase (MGMT) gene theoretically provides a positive or negative result. However, the faint MSP product is difficult to interpret. The aim of this study was to evaluate the significance of faint MSP product in glioblastoma (GBM). Critical concentrations of methylated control DNA, i.e., 100, 1, 0.5 and 0 % were run parallel with 116 newly diagnosed GBMs in order to standardize the interpretation and to distinguish positive (+), equivocal (±), and negative (−; unmethylated) results. Cases with the faint MSP product and its intensity between those of 1 and 0.5 % DNA controls were considered equivocal (±). MGMT methylation quantifications were also determined by quantitative real-time MSP (qMSP) and pyrosequencing (PSQ), and protein expression was detected by immunohistochemistry. There were significant correlations between MSP and all the aforementioned studies. The concordance rates between the MSP+ and qMSP+ cases, as well as the MSP− and qMSP− cases were 100 %, and the MSP± cases comprised 76.5 % of qMSP+ cases and 23.5 % of qMSP− cases. PSQ study showed that heterogeneous methylation was more frequently encountered in the MSP± cases. Multivariate analyses disclosed that although the overall survival of the MSP± cases was indistinct from that of the MSP+ cases, its progression free survival was significantly worse and was indistinct from that of the MSP− cases. In conclusion, GBMs with faint MGMT MSP products should be distinguished from MSP+ cases as their behaviors were different.

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Acknowledgments

The authors thank Ms. Siao-Han Huang for her technical assistance.

Conflict of Interest

The authors declare that they have no conflict of interest.

Funding

Taipei Veterans General Hospital (V100C-001, V100C-188, V101C-169, V102C-172, V103C-175, V104C-170 and V104C-187) and the Department of Health, Executive Yuan, R.O.C. (MOHW103-TD-B-111-02).

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Affiliations

  1. Department of Pathology and Laboratory Medicine, Taipei Veterans General Hospital, No. 201, Sec 2, Shih-Pai Road, Taipei, 11217, Taiwan

    Chih-Yi Hsu, Hsiang-Ling Ho, Shih-Chieh Lin, Yi-Chun Chang-Chien & Donald Ming-Tak Ho

  2. Neurological Institute, Taipei Veterans General Hospital, No. 201, Sec 2, Shih-Pai Road, Taipei, 11217, Taiwan

    Ming-Hsiung Chen, Sanford Ping-Chuan Hsu & Yu-Shu Yen

  3. Department of Radiology, Taipei Veterans General Hospital, No. 201, Sec 2, Shih-Pai Road, Taipei, 11217, Taiwan

    Wan-You Guo

  4. School of Medicine, National Yang-Ming University, Taipei, 11221, Taiwan

    Chih-Yi Hsu, Hsiang-Ling Ho, Shih-Chieh Lin, Ming-Hsiung Chen, Sanford Ping-Chuan Hsu, Yu-Shu Yen, Wan-You Guo & Donald Ming-Tak Ho

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  1. Chih-Yi Hsu
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Hsu, CY., Ho, HL., Lin, SC. et al. Prognosis of glioblastoma with faint MGMT methylation-specific PCR product. J Neurooncol 122, 179–188 (2015). https://doi.org/10.1007/s11060-014-1701-1

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Keywords

  • Glioblastoma
  • MGMT
  • Methylation
  • PCR
  • Quality control
  • Prognosis