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The comparison of Y chromosome microdeletion incidence in blood DNA and sperm cell DNA

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Abstract

Background

During gamete development and spermatogenesis, certain genes on the Y chromosome (Yq) in the Male-Specific Region (MSR) are responsible for human gametes formation. The long arm Yq is composed of both euchromatin and the genetically inactive heterochromatin regions. This region contains the Azoospermia factors AZFa, AZFb and AZFc. In the case of male infertility, microdeletions on the Yq chromosome appear to be structural chromosomal anomalies linked to sperm abnormality.

Methods

The present study aimed to look at the incidence, of Asthenospermia (AS), Teratospermia (TS), Oligospermia (OS) and Oligoasthenoteratospermia (OAT) patterns of Y chromosomal microdeletions in Indian infertile men with an (AZF a, b, c). This study was conducted with 75 infertile men as cases and 75 fertile men as a control for AZF locus microdeletion utilizing sequence-tagged sites.

Results

The AZFc region of germ cell DNA (50.6%) was the most deleted section in infertile men when compared to blood DNA (21.3%), followed by deletions in the AZFb region (21.3%) in germ cell DNA whereas blood DNA had no microdeletion in the AZFa region in both germ cell DNA and blood DNA. Infertile men displayed significant Yq microdeletion in both AZFb and also AZFc. Around 33% (25) of 75 infertile men had AZF (a, b, c) region microdeletion in blood DNA, compared to it germ cell DNA had a larger percentage of 72% (54) of Y chromosome microdeletions in the study samples.

Conclusion

A high-frequency rate of microdeletions seen in germ cell DNA. PCR-based Y chromosome microdeletion screening using germ cell DNA along with Genomic DNA might help in screening for genetic abnormality in infertile men who endure assisted reproductive technology treatments. This study might be attributable to the interplay of lifestyle and genetic factors, both contributing to the risk of developing these germ-line deletions.

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References

  1. Smith LB, Walker WH (2014) The regulation of spermatogenesis by androgens. Semen Cell Dev Biol 30:2–13. https://doi.org/10.1016/j.semcdb.2014.02.012

    Article  CAS  Google Scholar 

  2. Wang X, Sharma RK, Sikka SC, Thomas Jr AJ, Falcone T, Agarwal A (2003) Oxidative stress is associated with increased apoptosis leading to spermatozoa DNA damage in patients with male factor infertility. Fertil Steril 80(3):531–535

    Article  Google Scholar 

  3. Krausz C, Rosta V, Swerdloff RS, Wang C (2022) Genetics of male infertility. In: Emery and Rimoin’s principles and practice of medical genetics and genomics. pp 121–147

  4. Fainberg J, Kashanian JA (2019) Recent advances in understanding and managing male infertility. F1000Research. https://doi.org/10.12688/f1000research.17076.1

    Article  Google Scholar 

  5. Leaver RB (2016) Male infertility: an overview of causes and treatment options. Br J Nurs 25(18):S35–S40

    Article  Google Scholar 

  6. Ohlander SJ, Lindgren MC, Shultz L (2016) Testosterone and male infertility. Urol Clin 43(2):195–202

    Article  Google Scholar 

  7. World Health Organization (2010) Laboratory manual for the examination and processing of human semen 2010, 5th edn. Cambridge University Press, Cambridge

    Google Scholar 

  8. Jensen CFS, Østergren P, Dupree JM, Ohl DA, Sønksen J, Fode M (2017) Varicocele and male infertility. Nat Rev Urol 14(9):523–533

    Article  Google Scholar 

  9. Jenardhanan P, Panneerselvam M, Mathur PP (2016) Effect of environmental contaminants on spermatogenesis. Semin Cell Dev Biol 59:126–140

    Article  CAS  Google Scholar 

  10. Sharma R, Biedenharn KR, Fedor JM, Agarwal A (2013) Lifestyle factors and reproductive health: taking control of your fertility. Reprod Biol Endocrinol 11(1):1–15

    Article  Google Scholar 

  11. Stouffs K, Seneca S, Lissens W (2014) Genetic causes of male infertility. Annales d’endocrinologie 75(2):109–111

    Article  Google Scholar 

  12. Colaco S, Modi D (2019) Consequences of Y chromosome microdeletions beyond male infertility. J Assist Reprod Genet 36(7):1329–1337

    Article  Google Scholar 

  13. Ceylan GG, Ceylan C, Elyas H (2009) Genetic anomalies in patients with severe oligozoospermia and azoospermia in eastern Turkey: a prospective study. Genet Mol Res 8:915–922

    Article  CAS  Google Scholar 

  14. Dong Y, Du R-C, Jiang Y-T, Wu J, Li L-L, Liu R-Z (2012) Impact of chromosomal translocations on male infertility, semen quality, testicular volume and reproductive hormone levels. J Intl Med Res 40:2274

    Article  CAS  Google Scholar 

  15. Ambulkar P, Chaudhary A, Waghmare J, Tanaka A, Pal A (2015) Prevalence of Y chromosome microdeletions in idiopathic azoospermia cases in central Indian men. J Clin Diagn Res. https://doi.org/10.7860/JCDR/2015/15249.6515

    Article  Google Scholar 

  16. Rabinowitz MJ, Huffman PJ, Haney NM, Kohn TP (2021) Y-chromosome microdeletions: a review of prevalence, screening, and clinical considerations. Apply Clin Genet 14:51–59. https://doi.org/10.2147/TACG.S267421

    Article  Google Scholar 

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Funding

The authors received support from the organization Sri Ramachandra Institute of Higher Education and Research for the submitted work. 

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Correspondence to J. Vijayalakshmi.

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Archana, S., Vijayalakshmi, J., Usha Rani, G. et al. The comparison of Y chromosome microdeletion incidence in blood DNA and sperm cell DNA. Mol Biol Rep 50, 1203–1208 (2023). https://doi.org/10.1007/s11033-022-08076-8

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  • DOI: https://doi.org/10.1007/s11033-022-08076-8

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