Abstract
We developed microsatellite markers in Lycium ruthenicum, a desert plant widely distributed in northwestern China. In order to investigate its population genetic structure, genetic diversity, and its evolutionary history, we have isolated 11 novel microsatellite loci primers and characterized them in 24 individuals from 3 populations of L. ruthenicum using the combined biotin capture technique. For these microsatellites, one to seven alleles per locus were identified. The observed heterozygosities ranged from 0 to 0.958, meanwhile the expected heterozygosities ranged from 0 to 0.841. These microsatellite markers could be first useful for population level studies like genetic diversity and structure in this species.
References
Zheng J, Ding CX, Wang LS, Li GL, Shi JY, Li H, Wang HL, Suo YR (2011) Anthocyanins composition and antioxidant activity of wild Lycium ruthenicum Murr. from Qinghai-Tibet Plateau. Food Chem 126:859–865
Liu ZG, Tao YD, Shao Y, Zhang HG (2012) Determination of betaine in Lycium ruthenicum Murr. and Lycium barbarum L. Chin J Spectr Lab 29:694–697
Zhao XH, Tao YD, Shao Y, Mei LJ (2011) Safety assessment of Lycium ruthenicum Murr. pigment. Lishizhen Med Mater Med Res 22:373–375
Chen JJ, Liu XL, Zhu LY, Wang Y (2013) Nuclear genome size estimation and karyotype analysis of Lycium species (Solanaceae). Sci Hortic 151:46–50
Chen HK, Cao JM, Ren X, Huang SP, Zhang S (2008) Karyotype analysis of the chromosome of Lycium ruthenicum Murr. Chin North Hortic 7:207–209
Walter R, Epperson BK (2001) Geographic pattern of genetic variation in Pinus resinosa: area of greatest diversity is not the origin of postglacial populations. Mol Ecol 10:103–111
Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry 19:11–15
Li ZH (2009) Development of 10 polymorphic microsatellite loci primers for Codonopsis pilosula Nannf. (Campanulaceae). Conserv Genet 10:747–749
Van OC, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538
Acknowledgments
This work was supported by the development of Beifang University of Nationnalities for the National Natural Science Foundation of China (2012QZP09).
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Chen, Hk., Zhong, Y. Microsatellite markers for Lycium ruthenicum (Solananeae). Mol Biol Rep 41, 5545–5548 (2014). https://doi.org/10.1007/s11033-014-3442-9
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DOI: https://doi.org/10.1007/s11033-014-3442-9