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Mouse transmembrane BAX inhibitor Motif 3 (Tmbim3) encodes a 38 kDa transmembrane protein expressed in the central nervous system

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Abstract

Cell survival proteins play an important role throughout nervous system development, normal physiological processes, and pathological conditions. Transmembrane BAX inhibitor motif 3 (TMBIM3, also known as GRINA), is a member of a family of proteins that contain a conserved BAX inhibitor-1 motif. This family of proteins includes several members that have been shown to protect cells from apoptosis. In this study, the authors show that TMBIM3 is expressed in the brain including high levels in the hippocampus. Biochemical and sequence analysis of TMBIM3 demonstrates that the rat, murine, and human genes encode an approximately 38 kDa protein with a predicted seven transmembrane domain topology. A Tmbim3 knockout mouse line did not have an obvious phenotype, but may prove useful in future studies of this family of proteins.

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References

  1. Ferri KF, Kroemer G (2001) Organelle-specific initiation of cell death pathways. Nat Cell Biol 3:E255–E263

    Article  PubMed  CAS  Google Scholar 

  2. Reimers K, Choi CY, Bucan V, Vogt PM (2008) The Bax Inhibitor-1 (BI-1) family in apoptosis and tumorigenesis. Curr Mol Med 8:148–156

    Article  PubMed  CAS  Google Scholar 

  3. Xu Q, Reed JC (1998) Bax inhibitor-1, a mammalian apoptosis suppressor identified by functional screening in yeast. Mol Cell 1:337–346

    Article  PubMed  CAS  Google Scholar 

  4. Fernandez M, Segura MF, Sole C, Colino A, Comella JX, Cena V (2007) Lifeguard/neuronal membrane protein 35 regulates Fas ligand-mediated apoptosis in neurons via microdomain recruitment. J Neurochem 103:190–203

    PubMed  CAS  Google Scholar 

  5. Gubser C, Bergamaschi D, Hollinshead M, Lu X, van Kuppeveld FJ, Smith GL (2007) A new inhibitor of apoptosis from vaccinia virus and eukaryotes. PLoS Pathog 3:e17

    Article  PubMed  Google Scholar 

  6. Kumar KN, Tilakaratne N, Johnson PS, Allen AE, Michaelis EK (1991) Cloning of cDNA for the glutamate-binding subunit of an NMDA receptor complex. Nature 354:70–73

    Article  PubMed  CAS  Google Scholar 

  7. Burge C, Karlin S (1997) Prediction of complete gene structures in human genomic DNA. J Mol Biol 268:78–94

    Article  PubMed  CAS  Google Scholar 

  8. Krogh A, Larsson B, von Heijne G, Sonnhammer EL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305:567–580

    Article  PubMed  CAS  Google Scholar 

  9. Puntervoll P, Linding R, Gemund C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferre F, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Kuster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ (2003) ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Res 31:3625–3630

    Article  PubMed  CAS  Google Scholar 

  10. Lee NK, Lee SY (2002) Modulation of life and death by the tumor necrosis factor receptor-associated factors (TRAFs). J Biochem Mol Biol 35:61–66

    Article  PubMed  Google Scholar 

  11. Ye H, Arron JR, Lamothe B, Cirilli M, Kobayashi T, Shevde NK, Segal D, Dzivenu OK, Vologodskaia M, Yim M, Du K, Singh S, Pike JW, Darnay BG, Choi Y, Wu H (2002) Distinct molecular mechanism for initiating TRAF6 signalling. Nature 418:443–447

    Article  PubMed  CAS  Google Scholar 

  12. Blom N, Gammeltoft S, Brunak S (1999) Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. J Mol Biol 294:1351–1362

    Article  PubMed  CAS  Google Scholar 

  13. Swift AM, Machamer CE (1991) A Golgi retention signal in a membrane-spanning domain of coronavirus E1 protein. J Cell Biol 115:19–30

    Article  PubMed  CAS  Google Scholar 

  14. Chae HJ, Kim HR, Xu C, Bailly-Maitre B, Krajewska M, Krajewski S, Banares S, Cui J, Digicaylioglu M, Ke N, Kitada S, Monosov E, Thomas M, Kress CL, Babendure JR, Tsien RY, Lipton SA, Reed JC (2004) BI-1 regulates an apoptosis pathway linked to endoplasmic reticulum stress. Mol Cell 15:355–366

    Article  PubMed  CAS  Google Scholar 

  15. Zhao H, Ito A, Kimura SH, Yabuta N, Sakai N, Ikawa M, Okabe M, Matsuzawa Y, Yamashita S, Nojima H (2006) RECS1 deficiency in mice induces susceptibility to cystic medial degeneration. Genes Genet Syst 81:41–50

    Article  PubMed  CAS  Google Scholar 

  16. Eaton MJ, Chen JW, Kumar KN, Cong Y, Michaelis EK (1990) Immunochemical characterization of brain synaptic membrane glutamate-binding proteins. J Biol Chem 265:16195–16204

    PubMed  CAS  Google Scholar 

  17. Pfaffl MW, Horgan GW, Dempfle L (2002) Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res 30:e36

    Article  PubMed  Google Scholar 

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Acknowledgments

The authors thank Dr. Chang-Yu Wang for the whole brain membrane fraction. The authors thank Dr. Dragan Maric for his FACS expertise and analysis of the Tmbim3 cell survival experiments, and Dr. Jim Pickle for assistance with floxing. The authors thank Dr. Sara Szuchet for initiating this project. This research was supported by the Intramural Research Program of the National Institute of Neurological Disorders and Stroke (NINDS).

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Correspondence to Joseph A. Nielsen.

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Nielsen, J.A., Chambers, M.A., Romm, E. et al. Mouse transmembrane BAX inhibitor Motif 3 (Tmbim3) encodes a 38 kDa transmembrane protein expressed in the central nervous system. Mol Cell Biochem 357, 73–81 (2011). https://doi.org/10.1007/s11010-011-0877-3

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  • DOI: https://doi.org/10.1007/s11010-011-0877-3

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