Modeling Aggregation Processes of Lennard-Jones particles Via Stochastic Networks
- 134 Downloads
We model an isothermal aggregation process of particles/atoms interacting according to the Lennard-Jones pair potential by mapping the energy landscapes of each cluster size N onto stochastic networks, computing transition probabilities from the network for an N-particle cluster to the one for \(N+1\), and connecting these networks into a single joint network. The attachment rate is a control parameter. The resulting network representing the aggregation of up to 14 particles contains 6427 vertices. It is not only time-irreversible but also reducible. To analyze its transient dynamics, we introduce the sequence of the expected initial and pre-attachment distributions and compute them for a wide range of attachment rates and three values of temperature. As a result, we find the configurations most likely to be observed in the process of aggregation for each cluster size. We examine the attachment process and conduct a structural analysis of the sets of local energy minima for every cluster size. We show that both processes taking place in the network, attachment and relaxation, lead to the dominance of icosahedral packing in small (up to 14 atom) clusters.
KeywordsAggregation Lennard-Jones Continuous-time Markov chain Attachment rate Expected initial and pre-attachment distribution
This work was partially supported by the NSF Grant DMS1554907 and the NSF REU Grant DMS1359307 at the University of Maryland, College Park.
- 24.Holmes-Cerfon, M.: Sticky-sphere clusters. Annu. Rev. Condens. Matter Phys. In press (expected 8, March 10, 2017)Google Scholar
- 25.Jonsson, H., Mills, G., Jacobsen, K.W.: Nudged elastic band method for finding minimum energy paths of transitions. In: Berne, B.J., Ciccotti, G., Coker, D.F. (eds.) Classical and Quantum Dynamics in Condensed Phase Simulations, vol. 385. World Scientific, Singapore (1998)Google Scholar
- 27.Kovalenko, S.I., Solnyshkin, D.D., Verkhovtseva, E.T., Eremenko, V.V.: Experimental detection of stacking faults in rare gas clusters Chem. Phys. Lett. 250, 309 (1996)Google Scholar
- 40.Wales, D.J.: Energy Landscapes: Applications to Clusters, Biomolecules and Glasses. Cambridge University Press, Cambridge (2003)Google Scholar