Abstract
Potentiometric measurements have been performed at (25.0 ± 0.1) °C and ionic strength I = 0.1 mol·L−1 KNO3 for the interaction of guanine, thymine, uracil, aminouracil, guanosine, inosine, cytidine, guanosine 5′-monophosphate, adenosine 5′-diphosphate, adenosine 5′-triphosphate and palladium Pd(II) with the biologically important secondary ligands glycine, leucine, N,N-bis(2-hydroxyethyl) glycine, N-[tris(hydroxymethyl)methyl] glycine, d-2-t-butylglycine and Boc-N-methyl-l-leucine. The formation of various 1:1:1 ternary complexes and 1:1:2 quaternary complex species as well as the polynuclear species was inferred from the potentiometric pH-titration curves. The experimental conditions were selected such that self-association of the nucleobases, nucleosides or nucleotides and their complexes due to stacking interaction is negligibly small; that is, the normal monomeric protonated ternary complexes were studied. Formation of the ternary complexes of some systems was confirmed using cyclic voltammetry, differential pulse voltammetry and conductance measurements in solution.
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References
Eichhorn, G.L.: Inorganic Biochemistry, vol. 1, 2. Elsevier, New York (1997)
Sigel, H.: Metal Ions in Biological Systems, vol. 2. Marcel Dekker, New York (1973)
Azab, H.A., Hassan, A., El-Nady, A.M., Azkal, R.S.A.: Ternary complexes of nickel(II) with IMP, ADP and ATP as primary ligands and some biologically important polybasic oxygen acids as secondary ligands. Monatsh. Chem. 124, 267–276 (1993)
Azab, H.A., Hassan, A., El-Nady, A.M., Azkal, R.S.A.: Ternary complexes in solution: comparison of the coordination tendency of some polybasic oxygen acids towards the binary complexes of Cu(II) and adenosine 5′-mono, 5′-di, and 5′-triphosphate. J. Chem. Eng. Data 38, 502–505 (1993)
Azab, H.A., Hassan, A., El-Nady, A.M., Azkal, R.S.A.: Potentiometric studies of binary and ternary complexes of cobalt(II) with adenosine-5′-mono, di, and triphosphate and some biologically important polybasic oxygen acids. Monatsh. Chem. 125, 1059–1066 (1994)
Azab, H.A., El-Nady, A.M.: Ternary complexes in solution. Comparison of the coordination tendency of some biologically important zwitterionic buffers toward the binary complexes of Cu(II) and adenosine 5′-mono-, 5′-di-, and 5′-triphosphate. Monatsh. Chem. 125, 849–858 (1994)
Wienken, M., Kiss, A., Sóvágó, I., Fusch, E.C., Lippert, B.: Ternary palladium(II)–glycylmethionine-nucleobase complexes: solution studies and crystal structure of the 9-methylguanine compound. J. Chem. Soc. Dalton Trans. 563–568 (1997)
Azab, H.A., Abo El Nour, K.M., Sherif, S.: Metal ion complexes containing dipeptides, tripeptides, and biologically important zwitterionic buffers. J. Chem. Eng. Data 52, 381–390 (2007)
Azab, H.A., Anwar, Z.M.: Coordination tendency of some biologically important zwitterionic buffers toward metal ion nucleotide complexes at different temperatures. J. Chem. Eng. Data 57, 2890–2895 (2012)
Azab, H.A., Anwar, Z.M., Al-Deyab, S.S., Abd El-Gawad, I.I., Kamel, R.M.: Potentiometric, electrochemical, and fluorescence study of the coordination properties of the monomeric and dimeric complexes of Eu(III) with nucleobases and PIPES. J. Chem. Eng. Data 56, 1960–1969 (2011)
Azab, H.A., Anwar, Z.M., Al-Deyab, S.S., Abd El-Gawad, I.I., Kamel, R.M.: Comparison of the coordination tendency of amino acids, nucleobases, or mononucleotides toward the monomeric and dimeric lanthanide complexes with biologically important compounds. J. Chem. Eng. Data 56, 2613–2625 (2011)
Luscombe, N.M., Austin, S.E., Berman, H.M., Thornton, J.M.: An overview of the structures of protein–DNA complexes. Genome Biol. 1, reviews 001 (2000)
El-Sherif, A.A.: Coordination chemistry of palladium(II) ternary complexes with relevant biomolecules. In: Innocenti, A. (ed.) Stoichiometry and Research—the importance of Quantity in Biomedicine, pp. 79–120. InTech (2012). doi:10.5772/1875
Golubev, O., Lönnberg, T., Lönnberg, H.: Formation of mixed-ligand complexes of Pd2+ with nucleoside 5′-monophosphates and some metal-ion-binding nucleoside surrogates. Molecules 19, 16976–16986 (2014)
Buisson, D.H., Sigel, H.: Significance of binary and ternary copper(II) complexes for the promotion and protection of adenosine 5′-di- and triphosphate toward hydrolysis. Biochim. Biophys. Acta 343, 45–63 (1974)
Gran, G.: Determination of the equivalence point in potentiometric titration. Analyst 77, 661–671 (1952)
Marzilli, L.G.: Advances in Inorganic Biochemistry, p. 47 ff. Elsevier, New York (1981)
Barton, J.K., Lippard, S.J.: Nucleic Acid–Metal Ion Interactions, p. 31 ff. Wiley, New York (1980)
De Stefano, C., Princi, P., Rigano, C., Sammartono, S.: Computer analysis of equilibrium data in solution. ESAB2M: an improved version of the ESAB program. Ann. Chim. (Rome) 77, 643–675 (1987)
Perrin, D.D., Dempsey, B.: Buffers for pH and Metal Ion Control. Chapman & Hall, London (1979)
Gans, P., Sabatini, A., Vacca, A.: SUPERQUAD: an improved general program for computation of formation constants from potentiometric data. J. Chem. Soc. Dalton Trans. 1195–1200 (1985)
Good, N.E., Winget, G.D., Winter, W., Connolly, T.N., Izawa, S., Singh, R.M.: Hydrogen ion buffers for biological research. Biochemistry 5, 467–477 (1966)
Ferguson, W.J., Braunschweiger, K.I., Braunschweiger, W.R., Smith, J.R., McCormick, J.J., Wasmann, C.C., Jarvis, N.P., Bell, D.H., Good, N.E.: Hydrogen ion buffers for biological research. Anal. Biochem. 104, 300–310 (1980)
Smith, R.M., Martell, A.E., Chen, Y.: Critical evaluation of stability constants for nucleotide complexes with protons and metal ions and the accompanying enthalpy changes. Pure Appl. Chem. 63, 1015–1080 (1991)
Jin, V.X., Ranford, J.D.: Complexes of platinum(II) or palladium(II) with 1,10-phenanthroline and amino acids. Inorg. Chim. Acta 304, 38–44 (2000)
Sigel, H., Fischer, B.E., Farkas, E.: Ternary complexes in solution. 42. Metal ion promoted hydrophobic interactions between nucleotides and amino acids. Mixed-ligand adeonsine 5′-triphosphate/metal ion(II)/L-leucinate systems and related ternary complexes. J. Am. Chem. Soc. 22, 925–934 (1983)
Cotton, F.A., Wilkinson, A.A.: Advanced Inorganic Chemistry, A Comprehensive Text, 5th edn, p. 917. Wiley, New York (1988)
Wilkinson, G., Gillaed, R.D., McCleverty, J.A.: Comprehensive Coordination Chemistry, vol. 5. Pergamon, London (1987)
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The authors thanks Prof. Dr. B. Lippert, professor of inorganic chemistry at Dortmund University, Germany, for assistance and helpful discussions during a DFG Grant in Dortmund.
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Azab, H.A., Anwar, Z.M. & Kamel, R.M. Ternary Complexes Formed Among Pd(II) Ions, Nucleobases, Nucleosides, Nucleotides and Some Biologically Important Compounds. J Solution Chem 45, 1095–1114 (2016). https://doi.org/10.1007/s10953-016-0495-5
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DOI: https://doi.org/10.1007/s10953-016-0495-5