Abstract
A novel organoselenium compound named 4-((4-bromobenzyl)selanyl)aniline, C13H12BrNSe, (A), was synthesized via reduction of 4,4′-(1,2-diselandiyl)dianiline with sodium borohydride (NaBH4) and subsequent nucleophilic substitution (SN) reaction with 4-((4-bromobenzyl)selanyl)aniline. The single crystal X-Ray Diffraction result indicates that organoselenide (A) crystallizes in monoclinic P21/c space group with unit cell parameters a = 14.2897 (13) Å, b = 5.4068 (4) Å, c = 16.2386 (14) Å, V = 1242.81 (18) Å3 and Z = 4. The molecular packing is stabilized by N/C-H···Br and N–H···Se hydrogen bonds, Br···Br interactions, C–H···π, stacking interactions. Hirshfeld surface analysis allowed for better visualization and easier analysis of intermolecular interaction. The two-dimensional fingerprint revealed that the uppermost contributions to these surfaces come from H···H (38%), C···H (27.7%), Br···H (17.7%) and Se···H (8.1%) interactions. The intermolecular interactions energies in organoselenide (A) were calculated using B3LYP/6-31G(p,d) and B3LYP/6-311G(p,d) energy models. It reveals that the dispersion energy (Edis = -184.4 kJ/mol) contribution is preponderant over the electrostatic energy (Eele = -75.9 and 88.4 kJ/mol) contribution. The theoretical calculations were carried out using the DFT method to assess the molecular, frontier molecular orbitals, and global reactivity descriptors. The charge distribution in organoselenide (A) is visualized using molecular electrostatic potential surface.
Graphical Abstract
Similar content being viewed by others
References
D. Agnieszka, A. Wilkaniec, A. Adamczyk, Curr. Neuropharmacol. 14(3), 282–299 (2016)
O.M. Guillin et al., Nutrients 11(9), 2101 (2019)
F.F. El-Senduny, S.M. Shabana, D. Rösel, J. Brabek, I. Althagafi, G. Angeloni, G. Manolikakes, S. Shaaban, Future. Med. Chem. 13(19), 1655–1677 (2021)
S. Shaaban, S.M. Shabana, Y.S. Al-Faiyz, G. Manolikakes, F.F. El-Senduny, Bioorgan Chem. 109, 104713 (2021)
S. Shaaban, A. Zarrouk, D. Vervandier-Fasseur, Y.S. Al-Faiyz, H. El-Sawy, I. Althagafi, P. Andreoletti, M. Cherkaoui-Malki, Arab J Chem. 14(4), 103051 (2021)
S. Shaaban, A.A. Mahmoud, W.S. Hamama. (2014).https://doi.org/10.3998/ark.5550190.p008.763.
M. Govindasamy, W.-W. du Mont, H. Sies, Chem. Rev. 101(7), 2125–2180 (2001)
H. Steinbrenner, B. Speckmann, L.-O. Klotz, Arch. Biochem. Biophys. (2016). https://doi.org/10.1016/j.abb.2015.06.024
L. Calle, Y. Marrero-Ponce, J.R. Mora, Mol. Simul. (2021). https://doi.org/10.1080/08927022.2021.1975039
S. Shaaban, A.M. Ashmawy, A. Negm, L.A. Wessjohann, Eur. J. Med. Chem. (2019). https://doi.org/10.1016/j.ejmech.2019.06.075
E.J. Lenardão, C. Santi, L. Sancineto, New frontiers in organoselenium compounds (Springer, Switzerland, 2018)
J. Zhang, L. Yang, Y. Wang, T. Cao, Z. Sun, J. Xu, Y. Liu, G. Chen, ACS Appl. Biomater. (2021). https://doi.org/10.1021/acsabm.0c01561
S. Shaaban, A. Negm, A.M. Ashmawy, D.M. Ahmed, L.A. Wessjohann, Eur. J. Med. Chem. (2016). https://doi.org/10.1016/j.ejmech.2016.06.005
S. Shaaban, D.V. Fasseur, P. Andreoletti, A. Zarrouk, P. Richard, A. Negm, G. Manolikakes, C. Jacob, M. Cherkaoui-Malki, Bioorgan. Chem. (2018). https://doi.org/10.1016/j.bioorg.2018.05.019
L. Wang, Z. Yang, J. Fu, H. Yin, K. Xiong, Q. Tan, H. Jin et al., Free Radical Biol. Med. (2012). https://doi.org/10.1016/j.freeradbiomed.2011.11.034
G.N. Schrauzer, J. Nutr. 130(7), 1653–1656 (2000)
S.-F. Ye, Y. Yang, L. Wu, W.-W. Ma, H.-H. Zeng, J. Zhejiang Univ-Sci B. 18(5), 373–382 (2017)
M. Baarine, P. Andreoletti, A. Athias, T. Nury, A. Zarrouk, K. Ragot, A. Vejux et al., Neuroscience 213, 1–18 (2012)
O.V. Dolomanov, L.J. Bourhis, R.J. Gildea, J.A.K. Howard, H. Puschmann, J. Appl. Cryst. 42, 339–341 (2009)
G.M. Sheldrick, Acta Cryst. A71, 3–8 (2015)
K. Brandenburg, DIAMOND. Crystal Impact, GbR. Bonn, Germany, (2008)
M.J. Frisch, G.W. Trucks, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, J.A. Montgomery, J.T. Vreven, K.N. Kudin, J.C. Burant, J.M. Millam, S.S. Iyengar, J. Tomasi, V. Barone, B. Mennucci, M. Cossi, G. Scalmani, N. Rega, G.A. Petersson, H. Nakatsuji, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, M. Klene, X. Li, J.E. Knox, H.P. Hratchian, J.B. Cross, C. Adamo, J. Jaramillo, R. Gomperts, R.E. Stratmann, O. Yazyev, A.J. Austin, R. Cammi, C. Pomelli, J.W. Ochterski, P.Y. Ayala, K. Morokuma, G.A. Voth, P. Salvador, J.J. Dannenberg, V.G. Zakrzewski, S. Dapprich, A.D. Daniels, M.C. Strain, O. Farkas, D.K. Malick, A.D. Rabuck, K. Raghavachari, J.B. Foresman, J.V. Ortiz, Q. Cui, A.G. Baboul, S. Clifford, J. Cioslowski, B.B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R.L. Martin, D.J. Fox, T. Keith, M.A. AlLaham, C.Y. Peng, A. Nanayakkara, M. Challacombe, P.M.W. Gill, B. Johnson, W. Chen, M.W. Wong, C. Gonzalez, J.A. Pople, GAUSSIAN 03, revision B.04, (Gaussian Inc, Pittsburgh, 2003)
J.M. Campanario, E. Bronchalo, M.A. Hidalgo, An effective approach for teaching intermolecular interactions. J. Chem. Educ 71, 761–766 (1994)
B.K. Shukla, U. Yadava, M.R. Choudhury, J. Mol. Liq. (2015). https://doi.org/10.1016/j.molliq.2015.09.021
M.A. Spackman, D. Jayatilaka, Cryst Eng Comm. 11, 19–32 (2009)
M. J. Turner, J. J. McKinnon, S. K. Wolff, S. K. Grimwood, P. R. Spackman, D. Jayatilaka, M. A. Spackman, Crystal Explorer 17.5. (University of Western Australia, 2017)
J.J. McKinnon, D. Jayatilaka, M.A. Spackman, Chem. Commun. 11, 3814–3816 (2007)
J.C. Bronte, J.S. Ritch, Acta Cryst. (2015). https://doi.org/10.1107/S205698901500345X
H. Bouraoui, A. Boudjada, N. Hamdouni, Y. Mechehoud, J. Meinnel, Acta Cryst. (2015). https://doi.org/10.1107/S2056989015019969
P. Metrangolo, G. Resnati, IUCrJ 1, 5–7 (2014)
G. Berger, J. Soubhye, R. Wintjens, K. Robeyns, F. Meyer, Acta Crystallogr. Sect. B Struct. Sci. Cryst. Eng. Mater. 74, 618–627 (2018)
F.F. Awwadi, R.D. Willett, K.A. Peterson, B. Twamley, Chem. Eur. J. 12, 8952–8960 (2006)
Y.P. Nizhnik, A. Sons, M. Zeller, S.V. Rosokha, Cryst. Growth Des. 18, 1198 (2018)
A. Bondi, J. Phys. Chem. 68, 441–451 (1964)
S.L. Tan, M.M. Jotani, E.R.T. Tiekink, Acta Crystallogr. E Crystallogr. Commun. (2019). https://doi.org/10.1107/S2056989019001129
L. Chęcińska, A. Jóźwiak, M. Ciechańska, C. Paulmann, J.J. Holstein, B. Dittrich, M. Małecka, Z. Kristallogr. 233(9–10), 675–687 (2018)
P. Politzer, J.S. Murray, Theor. Chimi. Acta. 108, 134–142 (2002)
T.A. Yousef, J. Mol. Struct. 1215, 128180 (2020)
Acknowledgements
The authors extend their appreciation to the Deanship of Scientific Research at Imam Mohammad Ibn Saud Islamic University for funding this work through Research Group no. RG-21-09-68.
Funding
The authors have not disclosed any funding.
Author information
Authors and Affiliations
Contributions
All authors contributed to the study conception and design. Material preparation, data collection and analysis were performed by SS, HF, TY and MAM. The first draft of the manuscript was written by SS, HF and TY and all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.
Corresponding author
Ethics declarations
Conflict of interest
The authors have no conflicts of interest to declare that are relevant to the content of this article.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
About this article
Cite this article
Shaaban, S., Ferjani, H., Yousef, T. et al. Supramolecular Self-Assembly Built by Hydrogen, Stacking and Br···Br Interactions in 4-((4-Bromobenzyl)Selanyl)Aniline: Structure, Hirshfeld Surface Analysis, 3D Energy Framework Approach and Global Reactivity Descriptors. J Inorg Organomet Polym 32, 1878–1890 (2022). https://doi.org/10.1007/s10904-022-02284-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10904-022-02284-2