Skip to main content
Log in

Degradation of Outer Membrane Proteins of Synechococcus sp. in vitro and in situ

  • Published:
Journal of Oceanography Aims and scope Submit manuscript

Abstract

To examine the possibility that outer membrane proteins (OMP) of Synechococcus sp. remain in seawater, we investigated the stability of OMPs in vitro and in situ. Some fractions prepared from Synechococcus sp. CSIRO-94 were treated with trypsin and proteinase K. Four tightly bound OMPs were separated from Synechococcus. We designated the two major OMPs of 52 kDa and 48 kDa as Omp52Sy and Omp48Sy, respectively. Degradation of the OMP in natural seawater was monitored in microcosms to which intact Synechococcus cells and outer membrane (OM) were added. Omp52Sy and Omp48Sy were the most stable against trypsin and proteinase K among the OMPs when they were embedded in the OM. However, in the microcosm experiment using intact cells, Omp52Sy and Omp48Sy were detected in the particulate fraction only during the first 4 days, after which they could not longer be detected. Omp52Sy and Omp48Sy were the most stable proteins among the Synechococcus OMPs in vitro, but they might be degraded in situ. This indicates that stability of Synechococcus porin differs depending on complex formation with other membrane molecules, which might cause different preservation of microbial membrane proteins in the dissolved protein pool in the ocean. This study suggests that Gram negative bacterial OM with thin peptidoglycan forms a lipid bilayer that proptects OMP, but Synechococcus OM with thick peptidoglycan cannot form a lipid bilayer. The incomplete bilayer might not be able to protect from protease attack in the natural environment.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Bond, J. S. (1989): Commercially available proteases. p. 239. In Proteolytic Enzymes, A Practical Approach, ed. by R. J. Beynon and J. S. Bond, IRL Press at Oxford University Press, NY.

    Google Scholar 

  • Borch, N. H. and D. L. Kirchman (1999): Protection of protein from bacterial degradation by submicron particles. Aquat. Microb. Ecol., 16, 265–272.

    Google Scholar 

  • Campbell, L. and D. Vaulot (1993): Photosynthetic picoplankton community structure in the subtropical North Pacific Ocean near Hawaii (station ALOHA). Deep-Sea Res. I, 40, 2043–2060.

    Article  Google Scholar 

  • Drews, G. and J. Weckesser (1982): Function, structure and composition of cell walls and external layers. p. 333–357. In The Biology of Cyanobacteria, ed. by N. G. Carr and B. A. Whitton, Blackwell Scientific Publications, Oxford.

    Google Scholar 

  • Egli, T. (1995): The ecological and physiological significance of the growth of heterotrophic microorganisms with mix-ture of substrates. Adv. Microb. Ecol., 14, 305–386.

    Google Scholar 

  • Fallon, R. D. and I. D. Brock (1979): Decomposition of blue-green algal (cyanobacteria) blooms in Lake Mendota, Wis-consin. Appl. Environ. Microbiol., 37, 820–830.

    Google Scholar 

  • Gunnison, D. and M. Alexander (1975a): Basis for the resist-ance of several algae to microbial decomposition. Appl. Microbiol., 29, 729–738.

    Google Scholar 

  • Gunnison, D. and M. Alexander (1975b): Resistance and sus-ceptibility of algae to decomposition by natural microbial communities. Limnol. Oceanogr., 20, 64–70.

    Article  Google Scholar 

  • Hansel, A. and M. H. Tadros (1998): Characterization of two pore-forming proteins isolated from the outer membrane of Synechococcus PCC 6301. Current Microbiology, 36, 321–326

    Article  Google Scholar 

  • Hansel, A., A. Schmid, M. H. Tadros and U. J. Jürgens (1994): Isolation and characterization of porin from the outer mem-brane of Synechococcus PCC 6301. Arch. Microbiol., 161, 163–167.

    Google Scholar 

  • Hansel, A., F. Pattus, U. J. Jürgens and M. H. Tadros (1998): Cloning and characterization of the genes coding for two porins in the unicellular cyanobacteria Synechococcus PCC 6301. Biochim. Biophys. Acta, 1399, 31–39.

    Google Scholar 

  • Hansen, L., G. F. Krog and M. Søndergaard (1986): Decompo-sition of lake phytoplankton. 1. Dynamics of short-term de-composition. OIKOS, 46, 37–44.

    Google Scholar 

  • Hino, S. (1988): Extracellular release of organic matter associ-ated with the physiological state of freshwater blue-green algae. Archiv fur Hydrobiologie, 113, 307–317.

    Google Scholar 

  • Hoiczyk, E. and A. Hansel (2000): Cyanobacterial cell walls: news from unusual prokaryotic envelope. J. Bacteriol., 182, 1191–1199.

    Article  Google Scholar 

  • Höltje, J. V. (1995): From growth to autolysis: the murein hydrolases in Escherichia coli. Arch. Microbiol., 164, 243–254.

    Google Scholar 

  • Jürgens, U. J. and R. Benz (1989): Pore-forming activity of outer membrane extracts from the unicellular cyanobacteria Synechocystis sp. PCC 6714. Z Naturforsch, 44c, 147–151.

    Google Scholar 

  • Jürgens, U. J., J. R. Golecki and W. Jürgens (1985): Charac-terization of the cell wall of the unicellular cyanobacterium Synechocystis PCC 6714. Arch. Microbiol., 142, 168–174.

    Article  Google Scholar 

  • Koebnik, R., K. P. Locher and P. V. Gelder (2000): Structure and function of bacterial outer membrane proteins: barrels in a nutshell. Mol. Microbiol., 37, 239–253.

    Article  Google Scholar 

  • Koga, T. and T. Kawata (1983): Isolation and partial properties of a porin-like protein from Vibrio parahaemolyticus cell envelope. Microbiology and Immunology, 27, 861–867.

    Google Scholar 

  • Krog, G. F., L. Hansen and M. Søndergaard (1986): Decompo-sition of lake phytoplankton. 2. Composition and lability of lysis products. OIKOS, 46, 45–50.

    Google Scholar 

  • Laemmli, U. K. (1970): Cleavage of structual proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680–685.

    Article  Google Scholar 

  • Martinez, J. and F. Azam (1993): Aminopeptidase activity in marine chroococcoid cyanobacteria. Appl. Environ. Microbiol., 59, 3701–3707.

    Google Scholar 

  • Martinez, J., D. C. Smith, G. F. Steward and F. Azam (1996): Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate process-ing in the sea. Aquat. Microb. Ecol., 10, 223–230.

    Google Scholar 

  • Nagata, T. and D. L. Kirchman (1992): Release of macromolecular organic complexes by heterotrophic ma-rine flagellates. Mar. Ecol. Prog. Ser., 83, 233–240.

    Google Scholar 

  • Nagata, T., R. Fukuda, I. Koike, K. Kogure and D. L. Kirchman (1998): Degradation by bacteria of membrane and soluble protein in seawater. Aquat. Microb. Ecol., 14, 29–37.

    Google Scholar 

  • Nikaido, H. and M. Vaara (1985): Molecular basis of bacterial outer membrane permeability. Microbiology Review, 49, 1–32.

    Google Scholar 

  • Nurminen, M. (1978): A mild procedure to isolate the 34K, 35K, and 36K porins of the outer membrane of Salmonella typhimurium. FEMS Microbiology Letters, 3, 331–334.

    Google Scholar 

  • Rosenbusch, J. P. (1974): Characterization of the major enve-lope protein from Escherichia coli. J. Biol. Chem., 249, 8019–8029.

    Google Scholar 

  • Schulz, G. E. (1993): Bacterial porins: structure and function. Curr. Opin. Cell Biol., 5, 701–707.

    Article  Google Scholar 

  • Shibata, A., K. Kogure, I. Koike and K. Ohwada (1997): For-mation of submicron colloidal particles from marine bacte-ria by viral infection. Mar. Ecol. Prog. Ser., 155, 303–307.

    Google Scholar 

  • Suzuki, S., K. Kogure and E. Tanoue (1997): Immunochemical detection of dissolved proteins and their source bacteria in marine environment. Mar. Ecol. Prog. Ser., 158, 1–9.

    Google Scholar 

  • Tanoue, E., S. Nishiyama, M. Kamo and A. Tsugita (1995): Bacterial membranes: possible source of a major dissolved protein in seawater. Geochim. Cosmochim. Acta, 59, 2643–2648.

    Article  Google Scholar 

  • Tanoue, E., M. Ishii and T. Midorikawa (1996): Discrete dis-solved and particulate proteins in oceanic waters. Limnol. Oceanogr., 41, 1334–1343.

    Article  Google Scholar 

  • Watanabe, M. M., M. Kawachi, M. Hiroki and F. Kasai(2000): In NIES Collection. List of Strains. Sixth edition. Microalgae and Protozoa. National Institute for Environmental Studies Environment Agency, Japan, p. 35–38.

  • Waterbury, J. B., S. W. Watson, F. W. Valois and D. G. Franks (1986): Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus. In Pho-tosynthetic Picoplankton, Can. Bull. Fish. Aquat. Sci., p. 71–120.

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Miyoshi, T., Suzuki, S. Degradation of Outer Membrane Proteins of Synechococcus sp. in vitro and in situ. Journal of Oceanography 60, 825–833 (2004). https://doi.org/10.1007/s10872-004-5775-9

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10872-004-5775-9

Navigation