Abstract
Three aliphatic amine derived supramolecular complexes were synthesized and structurally characterized by X-ray crystallography. All these structures adopted the hetero supramolecular synthons. Compound 1 crystallizes in the monoclinic, space group C2/c, with a = 40.328(7) Å, b = 7.2054(14) Å, c = 7.6464(17) Å, α = 90º, β = 97.364(16)º, γ = 90º, V = 2203.6(8) Å3, Z = 8. Compound 2 crystallizes in the monoclinic, space group P2(1)/n, with a = 7.4134(4) Å, b = 18.3749(14) Å, c = 12.1456(12) Å, α = 90º, β = 104.227(2)º, γ = 90º, V = 1603.7(2) Å3, Z = 4. Compound 3 crystallizes in the monoclinic, space group P2(1)/c, with a = 9.8804(7) Å, b = 10.5061(8) Å, c = 11.8262(9) Å, α = 90º, β = 104.674(2)º, γ = 90º, V = 1187.57(15) Å3, Z = 2. Analysis of the crystal packing of 1–3 suggests that there are N–H···O hydrogen bonds between the acids and the aliphatic amines in all of the compounds. Except the classical hydrogen bonds, the secondary propagating interactions including CH···O, CH2···O, CH2···Cl, CH3···π, and π···π interactions also play important roles in the structure extension. In conclusion, we have shown that 2D–3D structures can be constructed by the collective non-covalent interactions.
Graphical Abstract
The crystal structures of the salts from aliphatic amines, (2,4-dichlorophenoxy)-acetic acid, 4-nitrophthalic acid, and 1,5-naphthalenedisulfonic acid are predominantly stabilized by the classical hydrogen bonds as well as CH···O, CH2···O, CH2···Cl, CH3···π, and π···π interactions.
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References
Steiner T (2002) Angew Chem Int Ed 41:48
Ma JC, Dougherty DA (1997) Chem Rev 97:1303
Nishio M (2004) CrystEngComm 6:130
Claessens CG, Stoddart JF (1997) J Phys Org Chem 10:254
Meyer EA, Castellano RK, Diederich F (2003) Angew Chem Int Ed 42:1210
Desiraju GR (1995) Angew Chem Int Ed 34:2311
Whitesides GM, Simanek EE, Mathias JP, Seto CT, Chin D, Mammen M, Gordon DM (1995) Acc Chem Res 28:37 and references therein
Qureshi MKN, Smith MD (2006) Chem Commun 48:5006–5008
Shukla R, Lindeman SV, Rathore R (2007) Chem Commun 36:3717–3719
Wan CQ, Chen XD, Mak TCW (2008) CrystEngComm 10:475
Prins LJ, Reinhoudt DN, Timmerman P (2001) Angew Chem Int Ed 40:2382
Sada K, Tani T, Shinkai S (2006) Synlett 15:2364–2374
Payer D, Comisso A, Dmitriev A, Strunskus T, Lin N, Woll C, DeVita A, Barth JV, Kern K (2007) Chem Eur J 13:3900
Schnabel T, Srivastava A, Vrabec J, Hasse H (2007) J Phys Chem B 111:9871
Tonge NM, MacMahon EC, Pugliesi I, Cockett MC (2007) J Chem Phys 126:154319
Suresh SJ (2007) J Chem Phys 126:204705
Fisher SZ, Anderson S, Henning R, Moffat K, Langan P, Thiyagarajand P, Schultzd AJ (2007) Acta Crystallogr D 63:1178
Weber E (1998) Design of organic solids. Topics in current chemistry, vol 198. Springer, Berlin
Bhogala BR (2003) Cryst Growth Des 3:547
Du M, Zhang ZH, Zhao XJ (2005) Cryst Growth Des 5:1199
Sarkar M, Biradha K (2006) Cryst Growth Des 6:202
Ballabh A, Trivedi DR, Dastidar P (2005) Cryst Growth Des 5:1545
Trivedi DR, Dastidar P (2006) Cryst Growth Des 6:1022
Aakeröy CB, Beatty AM, Helfrich BA (2001) Angew Chem Int Ed 40:3240
Pedireddi VR, Prakashareddy J (2002) Tetrahedron Lett 43:4927
Refat MS, Elfalaky A, Elesh E (2011) J Mol Struct 990(1–3):217
Metrangolo P, Neukirch H, Pilati T, Resnati G (2005) Acc Chem Res 47:386
Shattock TR, Arora KK, Vishweshwar P, Zaworotko MJ (2008) Cryst Growth Des 8:4533
Biradha K, Mahata G (2005) Cryst Growth Des 5:61
MacDonald JC, Dorrestein PC, Pilley MM (2001) Cryst Growth Des 1:29
Highfill ML, Chandrasekaran A, Lynch DE, Hamilton DG (2002) Cryst Growth Des 2:15
Vishweshwar P, Nangia A, Lynch VM (2002) J Org Chem 67:556
Nichol GS, Clegg W (2009) Cryst Growth Des 9:1844
Men YB, Sun JL, Huang ZT, Zheng QY (2009) CrystEngComm 11:978
Grossel CM, Dwyer AN, Hursthouse MB, Orton JB (2006) CrystEngComm 8:123
Sasaki T, Ida Y, Hisaki I, Yuge T, Uchida Y, Tohnai N, Miyata M (2014) Chem Eur J 20:2478
Jin SW, Wang DQ (2013) J Mol Struct 1037:242
Jin SW, Zhang WB, Wang DQ, Gao HF, Zhou JZ, Chen RP, Xu XL (2010) J Chem Crystallogr 40:87
Jin SW, Wang DQ, Jin ZJ, Wang LQ (2009) Polish J Chem 83:1937
Jin SW, Wang DQ (2010) J Chem Crystallogr 40:914
Blessing RH (1995) Acta Crystallogr A 51:33
Sheldrick GM (1996) SADABS “Siemens Area Detector Absorption Correction”. University of Göttingen, Göttingen
Sheldrick GM (1995) SHELXTL-PC, version 5.03. Siemens Analytical Instruments, Madison
Lynch DE, Thomas LC, Smith G, Byriel KA, Kennard CHL (1998) Aust J Chem 51:867
Smith G, White JM (2001) Aust J Chem 54:97
Williams DH, Fleming I (1995) Spectroscopic methods in organic chemistry, 5th edn. McGraw-hill, London
Bernstein J, Davis RE, Shimoni L, Chang NL (1995) Angew Chem Int Ed 34:1555
Wilkinson HS, Harrison WTA (2007) Acta Cryst E63:m902
Dale SH, Elsegood MRJ, Hemmings M, Wilkinson AL (2004) CrystEngComm 6:207
Liu ML, Chen ZQ (2012) Acta Cryst. E68:o1745
Acknowledgments
This research was supported by Zhejiang Provincial Natural Science Foundation of China under Grant No. LY14B010006, the Education Office Foundation of Zhejiang Province under Grant No. Y201017321, the National Training Programs of Innovation and Entrepreneurship of China for Undergraduates under Grant No. 201410341022, and the Open Foundation of Key Laboratory of Chemical Utilization of Forestry Biomass of Zhejiang Province, Zhejiang A & F University under Grant No. 2015CUFB02.
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Jin, S., Xu, K., Wen, X. et al. Crystal and Molecular Structures of Three Salts from Aliphatic Amines (2,4-Dichlorophenoxy)-acetic acid, 4-Nitrophthalic Acid, and 1,5-Naphthalenedisulfonic Acid. J Chem Crystallogr 45, 495–503 (2015). https://doi.org/10.1007/s10870-015-0619-6
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DOI: https://doi.org/10.1007/s10870-015-0619-6