Abstract
5,6-Dihydroxy-1,10-phenanthroline, obtained from recrystallization of a side-product of a condensation reaction between 1,10-phenanthroline-5,6-dione and 5,6-diamino-1,3-dimethyluracil, has been isolated as a dihydrochloride (C12H8N2O2·2HCl·0.5CH3CN) by vapor diffusion of acetonitrile into an ethanol/HCl solution. The compound crystallizes in the triclinic space group \( P\overline{1} \) with a = 5.8334(1) Å, b = 9.8041(2) Å, c = 11.9895(2) Å, α = 81.511(1)°, β = 76.395(1)°, γ = 81.429(1)°, and V = 654.48(2) Å3, Z = 2, R[F 2 > 2σ(F 2)] = 0.028, and wR(F 2) = 0.078. The crystal packing is stabilized by two N–H+···Cl− interactions (2.18(3) Å, 2.13(2) Å) and two O–H···Cl− interactions (2.11(3) Å, 2.20(3) Å). Pi-stacking of the phenanthrolinium rings results in an interplanar distance of 3.431(5) Å with the phenanthrolinium ring centroids displaced from each other by ~6 Å. The results for this diprotonated species are compared to those reported by Lin et al. (Acta Cryst E65:o2367, 2009) for the monoprotonated form and this reveals the possibility of using the relative –OH/phenanthroline ring orientations as a qualitative diagnostic of metal–ligand interactions in metal complexes of this ligand (Larsson and Ohrstrom in Inorg Chim Acta 357:657, 2004; Guan et al. in Acta Cryst C64:m311, 2008).
Index Abstract
The crystal structure of the diprotonated form of 5,6-dihdroxy-1,10-phenanthroline (5,6-dihydroxy-1,10-phenanthrolinium-1,10-ium dichloride) is discussed and compared to both the monoprotonated form and those complexed with Mn(II) and Co(III) reported in the literature.
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Notes
It should be noted that we were unable to duplicate isolation of this orange solid from the recrystallization of a new batch of side product from a subsequent dione/diamine condensation reaction; rather, we isolated a small amount of 1,10-phenanthroline-5,6-dione (identified by 1H-NMR).
Obviously, crystal packing effects and electronic effects can be difficult to separate; in this case, the similarity in –OH group orientation between the diprotonated free ligand and the Mn(II) complex could be due to similar crystal packing stabilization from O–H···Cl− interactions present in both crystals.
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Olaprath, W., Wheeler, K.A. & McGuire, M.E. 5,6-Dihydroxy-1,10-phenanthrolinium-1,10-ium dichloride. J Chem Crystallogr 41, 811–815 (2011). https://doi.org/10.1007/s10870-011-0003-0
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DOI: https://doi.org/10.1007/s10870-011-0003-0